Author details

Full Name

Gerald Quon

Affiliation

University of California davis

ORCID

Career Start Year

2003

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36803416	siVAE: interpretable deep generative models for single-cell transcriptomes.	Genome Biol	2023
37626024	Projecting RNA measurements onto single cell atlases to extract cell type-specific expression profiles using scProjection.	Nat Commun	2023
37080161	Modeling collective cell behavior in cancer: Perspectives from an interdisciplinary conversation.	Cell Syst	2023
34048574	The Axes of Life: A Roadmap for Understanding Dynamic Multiscale Systems.	Integr Comp Biol	2022
35627266	Single-Cell RNA-Seq Analysis Reveals Lung Epithelial Cell Type-Specific Responses to HDM and Regulation by Tet1.	Genes (Basel)	2022
33758196	Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research.	Nat Commun	2021
32726596	Systems-Level Properties of EGFR-RAS-ERK Signaling Amplify Local Signals to Generate Dynamic Gene Expression Heterogeneity.	Cell Syst	2020
31435019	Conserved cell types with divergent features in human versus mouse cortex.	Nature	2019
31752962	Correction to: scBFA: modeling detection patterns to mitigate technical noise in large-scale single-cell genomics data.	Genome Biol	2019
31500668	scBFA: modeling detection patterns to mitigate technical noise in large-scale single-cell genomics data.	Genome Biol	2019
31412909	scAlign: a tool for alignment, integration, and rare cell identification from scRNA-seq data.	Genome Biol	2019
30358386	A Plug-and-Play, Drug-on-Pillar Platform for Combination Drug Screening Implemented by Microfluidic Adaptive Printing.	Anal Chem	2018
26950747	Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases.	Nat Methods	2016
27244050	Gene Expression Deconvolution for Uncovering Molecular Signatures in Response to Therapy in Juvenile Idiopathic Arthritis.	PLoS One	2016
26886973	Probabilistic Modeling of Imaging, Genetics and Diagnosis.	IEEE Trans Med Imaging	2016
25693568	Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer's disease.	Nature	2015
26287746	FTO Obesity Variant Circuitry and Adipocyte Browning in Humans.	N Engl J Med	2015
25972088	ISOpureR: an R implementation of a computational purification algorithm of mixed tumour profiles.	BMC Bioinformatics	2015
25693563	Integrative analysis of 111 reference human epigenomes.	Nature	2015
23303775	Patterns of methylation heritability in a genome-wide analysis of four brain regions.	Nucleic Acids Res	2013
23657357	The benefits of selecting phenotype-specific variants for applications of mixed models in genomics.	Sci Rep	2013
23537167	Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction.	Genome Med	2013
23284283	PERT: a method for expression deconvolution of human blood samples from varied microenvironmental and developmental conditions.	PLoS Comput Biol	2012
21965819	Unsupervised detection of genes of influence in lung cancer using biological networks.	Bioinformatics	2011
20418358	Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure.	RNA	2010
19542156	ISOLATE: a computational strategy for identifying the primary origin of cancers using high-throughput sequencing.	Bioinformatics	2009
19371447	Conservation of core gene expression in vertebrate tissues.	J Biol	2009
15794151	Jabiru: harnessing Java 3D behaviors for device and display portability.	IEEE Comput Graph Appl	2005
16011803	Nh3D: a reference dataset of non-homologous protein structures.	BMC Struct Biol	2005
15096276	Pegasys: software for executing and integrating analyses of biological sequences.	BMC Bioinformatics	2004
12880210	4D bioinformatics: a new look at the ribosome as an example.	IUBMB Life	2003

1 - 31 of 31

Michael I Love

University of North Carolina at Chapel Hill

Career Start Year 2011

Number of shared co-authors 0

Owen J L Rackham

Duke-National University of Singapore

Career Start Year 2010

Number of shared co-authors 0

Joshua D Welch

University of Michigan ann arbor

Career Start Year 2009

Number of shared co-authors 5

H??ctor Corrada Bravo

University of Maryland College Park, College Park

Career Start Year 2009

Number of shared co-authors 14

Oliver Stegle

Wellcome Sanger Institute

Career Start Year 2008

Number of shared co-authors 10

Yuanfang Guan

University of Michigan ann arbor

Career Start Year 2007

Number of shared co-authors 7

Rahul Satija

Center for Genomics and Systems Biology, New York University

Career Start Year 2006

Number of shared co-authors 11

Altuna Akalin

Berlin Institute for Medical Systems Biology

Career Start Year 2006

Number of shared co-authors 1

Joshua W K Ho

The University of Hong Kong

Career Start Year 2006

Number of shared co-authors 3

Jun S Song

University of Illinois at Urbana-Champaign

Career Start Year 2005

Number of shared co-authors 8

Jessica C Mar

Australian Institute for Bioengineering and Nanotechnology, University of Queensland

Career Start Year 2005

Number of shared co-authors 1

Maria Chikina

University of Pittsburgh

Career Start Year 2005

Number of shared co-authors 2

John C Marioni

Cancer Research UK Cambridge Institute, University of Cambridge

Career Start Year 2004

Number of shared co-authors 6

Kasper D Hansen

Johns Hopkins University School of Medicine

Career Start Year 2004

Number of shared co-authors 1

Stephen A Ramsey

Oregon State University

Career Start Year 2004

Number of shared co-authors 0

Terence P Speed

Walter and Eliza Hall Institute of Medical Research

Career Start Year 2003

Number of shared co-authors 2

Florian Markowetz

CRUK Cambridge Institute, University of Cambridge

Career Start Year 2003

Number of shared co-authors 2

Zhandong Liu

Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital

Career Start Year 2003

Number of shared co-authors 6

Olga G Troyanskaya

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Career Start Year 2001

Number of shared co-authors 7

Jean Yee Hwa Yang

The University of Sydney

Career Start Year 2001

Number of shared co-authors 1

Mikhail G Dozmorov

Virginia Commonwealth University

Career Start Year 2001

Number of shared co-authors 1

Guo-Cheng Yuan

Dana-Farber Cancer Institute, Harvard School of Public Health

Career Start Year 2000

Number of shared co-authors 4

Christina Kendziorski

University of Wisconsin-Madison

Career Start Year 1999

Number of shared co-authors 0

Mark D Robinson

University of Zurich

Career Start Year 1997

Number of shared co-authors 11

Shannon K McWeeney

Oregon Health & Science University, University of California Berkeley

Career Start Year 1997

Number of shared co-authors 6

Wolfgang Huber

Technische Universitat Munchen

Career Start Year 1995

Number of shared co-authors 3

Fabian J Theis

Technical University of Munich

Career Start Year 1992

Number of shared co-authors 5

Wing Hung Wong

Stanford University

Career Start Year 1991

Number of shared co-authors 3

Aviv Regev

Broad Institute of MIT and Harvard

Career Start Year 1987

Number of shared co-authors 22

Yuval Kluger

Yale University School of Medicine

Career Start Year 1984

Number of shared co-authors 0

row(s) 1 - 30 of 30

Quaid Morris

Sloan Kettering Institute

Co-authored papers 8

Manolis Kellis

Massachusetts Institute of Technology

Co-authored papers 4

Paul C Boutros

University of California los angeles

Co-authored papers 3

David Heckerman

Co-authored papers 2

Ang Cui

Massachusetts Institute of Technology

Co-authored papers 2

Andreas R Pfenning

Co-authored papers 2

Amit G Deshwar

University of Toronto

Co-authored papers 2

Melina Claussnitzer

Broad Institute of MIT and Harvard

Co-authored papers 2

Syed Haider

Institute of Cancer Research

Co-authored papers 2

Li-Huei Tsai

The Picower Institute for Learning and Memory, Massachusetts Institute of Technology

Co-authored papers 2

Anshul Kundaje

Stanford University.

Co-authored papers 2

Martin Hirst

University of British Columbia

Co-authored papers 1

Mert R Sabuncu

Cornell University and Cornell Tech

Co-authored papers 1

Richard H Scheuermann

J. Craig Venter Institute

Co-authored papers 1

Jason Ernst

Co-authored papers 1

Theresa K Canfield

University of Washington

Co-authored papers 1

John W Whitaker

Co-authored papers 1

Sara Mostafavi

University of British Columbia and BC Children's Hospital

Co-authored papers 1

John A Stamatoyannopoulos

Altius Institute for Biomedical Sciences

Co-authored papers 1

Jose Javier Bravo-Cordero

The Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai

Co-authored papers 1

Wei Li

Co-authored papers 1

Shamil R Sunyaev

Harvard Medical School

Co-authored papers 1

Laurie A Boyer

Co-authored papers 1

Itai Yanai

Institute for Systems Genetics NYU Grossman School of Medicine

Co-authored papers 1

Michael Hawrylycz

Allen Institute for Brain Science

Co-authored papers 1

Polina Golland

Massachusetts Institute of Technology

Co-authored papers 1

Xiaoqin Xu

Co-authored papers 1

Tim R Mercer

Australian Institute for Bioengineering and Nanotechnology, University of Queensland

Co-authored papers 1

Steven J M Jones

University of British Columbia

Co-authored papers 1

Angela Tam

Co-authored papers 1

1 - 30

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