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Author Details

Mojca Ben??ina
National Institute of Chemistry
1994
81
32
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
35260576Regulation of protein secretion through chemical regulation of endoplasmic reticulum retention signal cleavage.Nat Commun2022
35739111Coiled-coil heterodimer-based recruitment of an exonuclease to CRISPR/Cas for enhanced gene editing.Nat Commun2022
35802180Proteolytically Activated CRAC Effectors through Designed Intramolecular Inhibition.ACS Synth Biol2022
32945079Distinctive probiotic features share common TLR2-dependent signalling in intestinal epithelial cells.Cell Microbiol2021
33911109Coiled-coil heterodimers with increased stability for cellular regulation and sensing SARS-CoV-2 spike protein-mediated cell fusion.Sci Rep2021
33925446A Nanoscaffolded Spike-RBD Vaccine Provides Protection against SARS-CoV-2 with Minimal Anti-Scaffold Response.Vaccines (Basel)2021
33505159Decrease in Cellular Nanovesicles Concentration in Blood of Athletes More Than 15 Hours After Marathon.Int J Nanomedicine2021
34771026Robust Saliva-Based RNA Extraction-Free One-Step Nucleic Acid Amplification Test for Mass SARS-CoV-2 Monitoring.Molecules2021
34004056Disruption of disulfides within RBD of SARS-CoV-2 spike protein prevents fusion and represents a target for viral entry inhibition by registered drugs.FASEB J2021
32448937Metabolic enzyme clustering by coiled coils improves the biosynthesis of resveratrol and mevalonate.AMB Express2020
33007998Differential Effect of Extracellular Acidic Environment on IL-1β Released from Human and Mouse Phagocytes.Int J Mol Sci2020
32643923Engineering and Rewiring of a Calcium-Dependent Signaling Pathway.ACS Synth Biol2020
30531965Design of fast proteolysis-based signaling and logic circuits in mammalian cells.Nat Chem Biol2019
29305575Publisher Correction: Phosphodiester backbone of the CpG motif within immunostimulatory oligodeoxynucleotides augments activation of Toll-like receptor 9.Sci Rep2018
30185875EpCAM homo-oligomerization is not the basis for its role in cell-cell adhesion.Sci Rep2018
29920759Extension and refinement of the recognition motif for Toll-like receptor 5 activation by flagellin.J Leukoc Biol2018
29358175Extracellular vesicle-mediated transfer of constitutively active MyD88<sup>L265P</sup> engages MyD88<sup>wt</sup> and activates signaling.Blood2018
29511267Publisher Correction: Phosphodiester backbone of the CpG motif within immunostimulatory oligodeoxynucleotides augments activation of Toll-like receptor 9.Sci Rep2018
28530246Short single-stranded DNA degradation products augment the activation of Toll-like receptor 9.Nat Commun2017
28392198Activation of cell membrane-localized Toll-like receptor 3 by siRNA.Immunol Lett2017
28115525Selectivity of Human TLR9 for Double CpG Motifs and Implications for the Recognition of Genomic DNA.J Immunol2017
29035374Design of coiled-coil protein-origami cages that self-assemble in vitro and in vivo.Nat Biotechnol2017
29097808Phosphodiester backbone of the CpG motif within immunostimulatory oligodeoxynucleotides augments activation of Toll-like receptor 9.Sci Rep2017
28827825The role of the C-terminal D0 domain of flagellin in activation of Toll like receptor 5.PLoS Pathog2017
27391968Distinctive Recognition of Flagellin by Human and Mouse Toll-Like Receptor 5.PLoS One2016
25393958Function-based mutation-resistant synthetic signaling device activated by HIV-1 proteolysis.ACS Synth Biol2015
26416273Species-Specific Minimal Sequence Motif for Oligodeoxyribonucleotides Activating Mouse TLR9.J Immunol2015
26087154Listeriolysin O Affects the Permeability of Caco-2 Monolayer in a Pore-Dependent and Ca2+-Independent Manner.PLoS One2015
25882631Protein kinase A signaling and calcium ions are major players in PAF mediated toxicity against Aspergillus niger.FEBS Lett2015
25780037Minimal sequence requirements for oligodeoxyribonucleotides activating human TLR9.J Immunol2015
24413461Designable DNA-binding domains enable construction of logic circuits in mammalian cells.Nat Chem Biol2014
25264186A bistable genetic switch based on designable DNA-binding domains.Nat Commun2014
25359991Activation of lymphoma-associated MyD88 mutations via allostery-induced TIR-domain oligomerization.Blood2014
25046860Intracellular pH responses in the industrially important fungus Trichoderma reesei.Fungal Genet Biol2014
24901993Vanadate from air pollutant inhibits hrs-dependent endosome fusion and augments responsiveness to toll-like receptors.PLoS One2014
24651829The ectodomain of TLR3 receptor is required for its plasma membrane translocation.PLoS One2014
23166319The role of UNC93B1 protein in surface localization of TLR3 receptor and in cell priming to nucleic acid agonists.J Biol Chem2013
24316570Illumination of the spatial order of intracellular pH by genetically encoded pH-sensitive sensors.Sensors (Basel)2013
24287545Noninvasive high-throughput single-cell analysis of HIV protease activity using ratiometric flow cytometry.Sensors (Basel)2013
24038689Noninvasive high-throughput single-cell analysis of the intracellular pH of Saccharomyces cerevisiae by ratiometric flow cytometry.Appl Environ Microbiol2013
24169720Determination of the interactions between Zn2+ and water soluble polymer ligands with potential use in controlled drug delivery.Acta Chim Slov2013
23624387Determination of the physiological 2:2 TLR5:flagellin activation stoichiometry revealed by the activity of a fusion receptor.Biochem Biophys Res Commun2013
23581883Hindered disulfide bonds to regulate release rate of model drug from mesoporous silica.ACS Appl Mater Interfaces2013
22021385DNA-guided assembly of biosynthetic pathways promotes improved catalytic efficiency.Nucleic Acids Res2012
22709678Metabolic engineering of Saccharomyces cerevisiae for bioconversion of D-xylose to D-xylonate.Metab Eng2012
22829600Toll/interleukin-1 receptor domain dimers as the platform for activation and enhanced inhibition of Toll-like receptor signaling.J Biol Chem2012
22819990Chimeric flagellin as the self-adjuvanting antigen for the activation of immune response against Helicobacter pylori.Vaccine2012
22906851Antiarrhythmic drug amiodarone displays antifungal activity, induces irregular calcium response and intracellular acidification of Aspergillus niger - amiodarone targets calcium and pH homeostasis of A. niger.Fungal Genet Biol2012
22926439NLRP3 inflammasome activation in macrophage cell lines by prion protein fibrils as the source of IL-1β and neuronal toxicity.Cell Mol Life Sci2012
22280251Mycoplasma synoviae induces upregulation of apoptotic genes, secretion of nitric oxide and appearance of an apoptotic phenotype in infected chicken chondrocytes.Vet Res2012
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Collaborators

Roman Jerala
National Institute of Chemistry
Co-authored papers 43
Iva Hafner-Bratkovi??
National Institute of Chemistry
Co-authored papers 6
Helena Gradi??ar
National Institute of Chemistry
Co-authored papers 2
Ian T Paulsen
Macquarie University
Co-authored papers 1
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 1
Magnus Abrahamson
Skane University Hospital, Lund University
Co-authored papers 1
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 1
Eva Zerovnik
Jozef Stefan Institute
Co-authored papers 1
Stephen G Oliver
University of Cambridge
Co-authored papers 1
Miha Renko
Jozef Stefan Institute
Co-authored papers 1
Oliver Kohlbacher
Max Planck Institute for Developmental Biology
Co-authored papers 1
David R Nelson
University of Tennessee Health Science Center
Co-authored papers 1
Miha Pav??i??
University of Ljubljana
Co-authored papers 1
Robyn M Kaake
J. David Gladstone Institutes
Co-authored papers 1
Vito Turk
Jozef Stefan Institute
Co-authored papers 1
Jennifer R Wortman
Broad Institute of MIT and Harvard
Co-authored papers 1
John H Doonan
University of Copenhagen
Co-authored papers 1
Jens Nielsen
Chalmers University of Technology
Co-authored papers 1
Katherine A Fitzgerald
Co-authored papers 1
Brigita Lenarcic
University of Ljubljana
Co-authored papers 1
Alja?? Gaber
University of Ljubljana
Co-authored papers 1
Seung Joong Kim
Korea Advanced Institute of Science and Technology (KAIST)
Co-authored papers 1
Alex Zelter
University of Washington
Co-authored papers 1
Jennifer Deegan
Texas Epidemic Public Health Institute (TEPHI)
Co-authored papers 1
Jose Maria Carazo
National Centre for Biotechnology (CNB CSIC), Campus Universidad Autonoma de Madrid
Co-authored papers 1
Release 1.2