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Author Details

Jun-Tao Guo
University of North Carolina at Charlotte
1999
58
21
PMIDPaper TitleJournal TitlePublished Year
37065492Identification and immuno-infiltration analysis of cuproptosis regulators in human spermatogenic dysfunction.Front Genet2023
36978156ComparePD: Improving protein-DNA complex model comparison with hydrogen bond energy-based metrics.Proteins2023
35122321Insights into protein-DNA interactions from hydrogen bond energy-based comparative protein-ligand analyses.Proteins2022
35495145RNA Sequencing of Cardiac in a Rat Model Uncovers Potential Target LncRNA of Diabetic Cardiomyopathy.Front Genet2022
36139026Single-Stranded DNA Binding Proteins and Their Identification Using Machine Learning-Based Approaches.Biomolecules2022
36351394Tuft-cell-intrinsic and -extrinsic mediators of norovirus tropism regulate viral immunity.Cell Rep2022
34707120Structural and functional analysis of somatic coding and UTR indels in breast and lung cancer genomes.Sci Rep2021
33655206A comparative study of protein-ssDNA interactions.NAR Genom Bioinform2021
33167946Comparative assessments of indel annotations in healthy and cancer genomes with next-generation sequencing data.BMC Med Genomics2020
31665426New insights into protein-DNA binding specificity from hydrogen bond based comparative study.Nucleic Acids Res2019
31780678Prognostic and therapeutic potential of Adenylate kinase 2 in lung adenocarcinoma.Sci Rep2019
30577740An SVM-based method for assessment of transcription factor-DNA complex models.BMC Bioinformatics2018
28839204Effects of short indels on protein structure and function in human genomes.Sci Rep2017
34724757Molecular evolution of Zika virus as it crossed the Pacific to the Americas.Cladistics2017
28107007Chlorophyll-Catalyzed Visible-Light-Mediated Synthesis of Tetrahydroquinolines from N,N-Dimethylanilines and Maleimides.J Org Chem2017
28715997An efficient algorithm for improving structure-based prediction of transcription factor binding sites.BMC Bioinformatics2017
27307632Structure-based prediction of transcription factor binding specificity using an integrative energy function.Bioinformatics2016
27147539Statistical analysis of structural determinants for protein-DNA-binding specificity.Proteins2016
25495540Investigation of arc repressor DNA-binding specificity by comparative molecular dynamics simulations.J Biomol Struct Dyn2015
24061925Towards comprehensive analysis of protein family quantitative stability-flexibility relationships using homology models.Methods Mol Biol2014
24763364Semisynthesis and in vitro cytotoxic evaluation of new analogues of 1-O-acetylbritannilactone, a sesquiterpene from Inula britannica.Eur J Med Chem2014
24500196Direct activation of human and mouse Oct4 genes using engineered TALE and Cas9 transcription factors.Nucleic Acids Res2014
23220404Contribution of V(H) replacement products to the generation of anti-HIV antibodies.Clin Immunol2013
23720291Porphyrin and heme metabolism and the porphyrias.Compr Physiol2013
23220572A knowledge-based orientation potential for transcription factor-DNA docking.Bioinformatics2013
22759575High performance transcription factor-DNA docking with GPU computing.Proteome Sci2012
22943312TFinDit: transcription factor-DNA interaction data depository.BMC Bioinformatics2012
21371326Structural analysis of heme proteins: implications for design and prediction.BMC Struct Biol2011
22044637Benchmarks for flexible and rigid transcription factor-DNA docking.BMC Struct Biol2011
20684774Systematic analysis of short internal indels and their impact on protein folding.BMC Struct Biol2010
19799149[Simple sequence repeat variation and small-scale spatial autocorrelation analysis on smooth-shell populations of Oncomelania hupensis in Sichuan province].Zhonghua Liu Xing Bing Xue Za Zhi2009
19594872PDA: an automatic and comprehensive analysis program for protein-DNA complex structures.BMC Genomics2009
18075160A historical perspective of template-based protein structure prediction.Methods Mol Biol2008
19173938[Sequencing on products of Oncomelania hupensis through simple sequence repeat anchored polymerase chain reaction amplification].Zhonghua Liu Xing Bing Xue Za Zhi2008
18574864Improving the performance of protein threading using insertion/deletion frequency arrays.J Bioinform Comput Biol2008
18508498Towards modeling of amyloid fibril structures.Front Biosci2008
18320590Structure-based prediction of transcription factor binding sites using a protein-DNA docking approach.Proteins2008
17299764Analysis of chameleon sequences and their implications in biological processes.Proteins2007
17951836Improvement in protein sequence-structure alignment using insertion/deletion frequency arrays.Comput Syst Bioinformatics Conf2007
17046665Amyloid fibril structure modeling using protein threading and molecular dynamics simulations.Methods Enzymol2006
17503397A generalized threading model using integer programming that allows for secondary structure element deletion.Genome Inform2006
15673715Quantitative evaluation of protein-DNA interactions using an optimized knowledge-based potential.Nucleic Acids Res2005
16354838Structural genomics analysis of alternative splicing and application to isoform structure modeling.Proc Natl Acad Sci U S A2005
15840492Photochemical surface mapping of C14S-Sml1p for constrained computational modeling of protein structure.Anal Biochem2005
14687578Mapping abeta amyloid fibril secondary structure using scanning proline mutagenesis.J Mol Biol2004
15222768Sml1p is a dimer in solution: characterization of denaturation and renaturation of recombinant Sml1p.Biochemistry2004
15215441PROSPECT-PSPP: an automatic computational pipeline for protein structure prediction.Nucleic Acids Res2004
15340923Molecular modeling of the core of Abeta amyloid fibrils.Proteins2004
14744980Protein structure prediction using sparse dipolar coupling data.Nucleic Acids Res2004
14992525Protein fold recognition through application of residual dipolar coupling data.Pac Symp Biocomput2004
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Collaborators

Ying Xu
The China-Japan Union Hospital, Jilin University
Co-authored papers 13
Kyle Ellrott
Oregon Health & Science University
Co-authored papers 6
Victor Olman
University of Georgia
Co-authored papers 5
Rosario I Corona
Cedars-Sinai Medical Center
Co-authored papers 4
RyangGuk Kim
College of Computing and Informatics, University of North Carolina at Charlotte
Co-authored papers 4
Dong Xu
University of Missouri
Co-authored papers 3
Alvin Farrel
Children's Hospital of Philadelphia
Co-authored papers 3
Dongsup Kim
Korea Advanced Institute of Science and Technology
Co-authored papers 2
Ying Xu
Oak Ridge National Laboratory
Co-authored papers 2
Craig B Wilen
Yale School of Medicine
Co-authored papers 1
Mark A Lovell
University of Kentucky
Co-authored papers 1
Joshua S Sharp
Co-authored papers 1
Thomas J Montine
Stanford University
Co-authored papers 1
Jing Chen
College of Bioinformatics Science and Technology, Harbin Medical University
Co-authored papers 1
Dennis R Livesay
Co-authored papers 1
Daniel Janies
University of North Carolina at Charlotte
Co-authored papers 1
Won Jae Chung
Ansan Hospital, Korea University
Co-authored papers 1
Rodney Rothstein
Columbia University Vagelos College of Physicians & Surgeons
Co-authored papers 1
Sergei Passovets
Co-authored papers 1
Xiaolan Zhao
Memorial Sloan-Kettering Cancer Center
Co-authored papers 1
Release 1.2