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Author Details

Bin Xue
University of California at Berkeley
2007
95
41
PMIDPaper TitleJournal TitlePublished Year
34301766<i>miR-200</i> deficiency promotes lung cancer metastasis by activating Notch signaling in cancer-associated fibroblasts.Genes Dev2021
31232187Analyzing aggregation propensities of clinically relevant PTEN mutants: a new culprit in pathogenesis of cancer and other PTENopathies.J Biomol Struct Dyn2020
31894361The dark side of Alzheimer's disease: unstructured biology of proteins from the amyloid cascade signaling pathway.Cell Mol Life Sci2020
31797594Many-to-one binding by intrinsically disordered protein regions.Pac Symp Biocomput2020
32466138Intrinsic Disorder in Tetratricopeptide Repeat Proteins.Int J Mol Sci2020
30813885Significant improvement of miRNA target prediction accuracy in large datasets using meta-strategy based on comprehensive voting and artificial neural networks.BMC Genomics2019
31861935Computational Disorder Analysis in Ethylene Response Factors Uncovers Binding Motifs Critical to Their Diverse Functions.Int J Mol Sci2019
31215361Recent Advances in Machine Learning Based Prediction of RNA-protein Interactions.Protein Pept Lett2019
28843784How many differentially expressed genes: A perspective from the comparison of genotypic and phenotypic distances.Genomics2018
30301243Decision-Tree Based Meta-Strategy Improved Accuracy of Disorder Prediction and Identified Novel Disordered Residues Inside Binding Motifs.Int J Mol Sci2018
27718363Structural pliability adjacent to the kinase domain highlights contribution of FAK1 IDRs to cytoskeletal remodeling.Biochim Biophys Acta Proteins Proteom2017
28435088Improving prediction accuracy using decision-tree-based meta-strategy and multi-threshold sequential-voting exemplified by miRNA target prediction.Genomics2017
28795090Consensus datasets of mouse miRNA-mRNA interactions from multiple online resources.Data Brief2017
27391701Intrinsic Disorder in Transmembrane Proteins: Roles in Signaling and Topology Prediction.PLoS One2016
27585692Self-regulation of functional pathways by motifs inside the disordered tails of beta-catenin.BMC Genomics2016
28004021Data on evolution of intrinsically disordered regions of the human kinome and contribution of FAK1 IDRs to cytoskeletal remodeling.Data Brief2016
28002428Integrated Strategy Improves the Prediction Accuracy of miRNA in Large Dataset.PLoS One2016
24939692Exceptionally abundant exceptions: comprehensive characterization of intrinsic disorder in all domains of life.Cell Mol Life Sci2015
26319992Role of structural flexibility in the evolution of emerin.J Theor Biol2015
26227315Erratum to: Improving protein order-disorder classification using charge-hydropathy plots.BMC Bioinformatics2015
26086829Identifying Similar Patterns of Structural Flexibility in Proteins by Disorder Prediction and Dynamic Programming.Int J Mol Sci2015
25694109Superdomains in the protein structure hierarchy: The case of PTP-C2.Protein Sci2015
25714333Disorder in milk proteins: caseins, intrinsically disordered colloids.Curr Protein Pept Sci2015
25811425Correction to disordered proteinaceous machines.Chem Rev2015
25424537Intrinsic disorder mediates hepatitis C virus core-host cell protein interactions.Protein Sci2015
23713779Disordered interactome of human papillomavirus.Curr Pharm Des2014
25610865DBC1/CCAR2 and CCAR1 Are Largely Disordered Proteins that Have Evolved from One Common Ancestor.Biomed Res Int2014
25559583Improving protein order-disorder classification using charge-hydropathy plots.BMC Bioinformatics2014
25039985The intrinsically disordered structural platform of the plant defence hub protein RPM1-interacting protein 4 provides insights into its mode of action in the host-pathogen interface and evolution of the nitrate-induced domain protein family.FEBS J2014
25099472Presence and utility of intrinsically disordered regions in kinases.Mol Biosyst2014
24841368Identifying novel cell cycle proteins in Apicomplexa parasites through co-expression decision analysis.PLoS One2014
24752801The intrinsic disorder status of the human hepatitis C virus proteome.Mol Biosyst2014
24747961An expanding universe of the non-coding genome in cancer biology.Carcinogenesis2014
24823319Structural disorder in viral proteins.Chem Rev2014
24845231Targeting the disordered C terminus of PTP1B with an allosteric inhibitor.Nat Chem Biol2014
24549315A putative role of the Sup35p C-terminal domain in the cytoskeleton organization during yeast mitosis.Mol Biosyst2014
24599592G-protein-coupled receptor GPR161 is overexpressed in breast cancer and is a promoter of cell proliferation and invasion.Proc Natl Acad Sci U S A2014
24184279Intrinsic disorder in proteins involved in the innate antiviral immunity: another flexible side of a molecular arms race.J Mol Biol2014
24211251Contribution of proline to the pre-structuring tendency of transient helical secondary structure elements in intrinsically disordered proteins.Biochim Biophys Acta2014
23942625A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome.Cell Mol Life Sci2014
23352836Intrinsically disordered regions of p53 family are highly diversified in evolution.Biochim Biophys Acta2013
28516016Structural characterizations of phosphorylatable residues in transmembrane proteins from <i>Arabidopsis thaliana</i>.Intrinsically Disord Proteins2013
28516017Distribution and cluster analysis of predicted intrinsically disordered protein Pfam domains.Intrinsically Disord Proteins2013
24358900On the intrinsic disorder status of the major players in programmed cell death pathways.F1000Res2013
24014171Ordered disorder of the astrocytic dystrophin-associated protein complex in the norm and pathology.PLoS One2013
23638354Malleable ribonucleoprotein machine: protein intrinsic disorder in the Saccharomyces cerevisiae spliceosome.PeerJ2013
23603389Stochastic machines as a colocalization mechanism for scaffold protein function.FEBS Lett2013
23764774Resilience of death: intrinsic disorder in proteins involved in the programmed cell death.Cell Death Differ2013
23783762Intrinsic disorder in PTEN and its interactome confers structural plasticity and functional versatility.Sci Rep2013
23403842Protein intrinsic disorder in the acetylome of intracellular and extracellular Toxoplasma gondii.Mol Biosyst2013
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Collaborators

Vladimir N Uversky
Morsani College of Medicine, University of South Florida
Co-authored papers 69
Alan Keith Dunker
Center for Computational Biology, Indiana University School of Medicine
Co-authored papers 32
Senthil K Muthuswamy
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 8
Yaoqi Zhou
Co-authored papers 6
Xiaowen Liu
Tulane Center for Biomedical Informatics and Genomics, Tulane University
Co-authored papers 2
Nicholas K Tonks
University of Washington
Co-authored papers 2
Zoran Obradovic
Center for Data Analytics and Biomedical Informatics, Temple University
Co-authored papers 2
Douglas J LaCount
Purdue University
Co-authored papers 2
Li Shen
University of Pennsylvania
Co-authored papers 2
Marc S Cortese
University of the Basque Country
Co-authored papers 1
Niloofar Arshadi
Dalla Lana School of Public Health, University of Toronto
Co-authored papers 1
Irina Kalatskaya
EMD Serono Research & Development Institute, Inc. (an affiliate of Merck KGaA)
Co-authored papers 1
Peter Tompa
VIB-VUB Center for Structural Biology
Co-authored papers 1
Monte M Winslow
Stanford University School of Medicine
Co-authored papers 1
Ari Elson
The Weizmann Institute of Science
Co-authored papers 1
Sylvie Ricard-Blum
ICBMS UMR CNRS 5246, University Lyon 1
Co-authored papers 1
Roland L Dunbrack
Fox Chase Cancer Center
Co-authored papers 1
Syed Haider
Institute of Cancer Research
Co-authored papers 1
Donald C Allred
Co-authored papers 1
Tanguy LeGall
Centre hospitalier universitaire Caremeau, service de pharmacie
Co-authored papers 1
Allan Bradley
The Wellcome Trust Sanger Institute
Co-authored papers 1
Paul C Boutros
University of California los angeles
Co-authored papers 1
Stefan Wuchty
University of Miami
Co-authored papers 1
Ling Huang
Beth Israel Deaconess Medical Center, Harvard Medical School
Co-authored papers 1
Francis Nguyen
Ontario Institute for Cancer Research
Co-authored papers 1
Eldon L Ulrich
University of Wisconsin-Madison
Co-authored papers 1
Lakshmi Muthuswamy
Harvard Medical School
Co-authored papers 1
Ren Sun
University of California los angeles
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Release 1.2