Author details

Full Name

Stacey L Harmer

Affiliation

Department of Plant Biology University of California Davis California USA.

ORCID

Career Start Year

1990

Papers

H Index

Expertise

CM4AI Collaborator

Nevan J Krogan (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36637156	The circadian clock controls temporal and spatial patterns of floral development in sunflower.	Elife	2023
37906610	Multiple light signaling pathways control solar tracking in sunflowers.	PLoS Biol	2023
37811362	Myb-like transcription factors have epistatic effects on circadian clock function but additive effects on plant growth.	Plant Direct	2023
36974904	XAP5 CIRCADIAN TIMEKEEPER regulates RNA splicing and the circadian clock by genetically separable pathways.	Plant Physiol	2023
35900174	Focus on circadian rhythms.	Plant Physiol	2022
33972605	A TILLING by sequencing approach to identify induced mutations in sunflower genes.	Sci Rep	2021
34659282	XAP5 CIRCADIAN TIMEKEEPER Affects Both DNA Damage Responses and Immune Signaling in <i>Arabidopsis</i>.	Front Plant Sci	2021
34318484	Flower orientation influences floral temperature, pollinator visits and plant fitness.	New Phytol	2021
31138544	Circadian Rhythms in Plants.	Cold Spring Harb Perspect Biol	2019
30774641	Arabidopsis JMJD5/JMJ30 Acts Independently of LUX ARRHYTHMO Within the Plant Circadian Clock to Enable Temperature Compensation.	Front Plant Sci	2019
29107827	Growth-mediated plant movements: hidden in plain sight.	Curr Opin Plant Biol	2018
29915068	Multiple feedback loops of the Arabidopsis circadian clock provide rhythmic robustness across environmental conditions.	Proc Natl Acad Sci U S A	2018
28792639	Circadian rhythms vary over the growing season and correlate with fitness components.	Mol Ecol	2017
28254761	The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.	Plant Physiol	2017
29098954	Guidelines for Genome-Scale Analysis of Biological Rhythms.	J Biol Rhythms	2017
27061301	Circadian regulation of hormone signaling and plant physiology.	Plant Mol Biol	2016
27761349	<i>YUCCA</i> auxin biosynthetic genes are required for Arabidopsis shade avoidance.	PeerJ	2016
27493185	Circadian regulation of sunflower heliotropism, floral orientation, and pollinator visits.	Science	2016
26220933	Reassess the t Test: Interact with All Your Data via ANOVA.	Plant Cell	2015
26157113	A Constitutively Active Allele of Phytochrome B Maintains Circadian Robustness in the Absence of Light.	Plant Physiol	2015
24373845	Wheels within wheels: the plant circadian system.	Trends Plant Sci	2014
24792043	Global profiling of the circadian transcriptome using microarrays.	Methods Mol Biol	2014
24908502	Turning heads: the biology of solar tracking in sunflower.	Plant Sci	2014
24957674	Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts.	EMBO Rep	2014
24630072	Interview with Stacey L. Harmer.	Trends Plant Sci	2014
23302690	Unanticipated regulatory roles for Arabidopsis phytochromes revealed by null mutant analysis.	Proc Natl Acad Sci U S A	2013
23638299	Accurate timekeeping is controlled by a cycling activator in Arabidopsis.	Elife	2013
23540698	The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin.	Cell	2013
23110899	Mutation of Arabidopsis spliceosomal timekeeper locus1 causes circadian clock defects.	Plant Cell	2012
23185460	Circadian phase has profound effects on differential expression analysis.	PLoS One	2012
21163961	XAP5 CIRCADIAN TIMEKEEPER regulates ethylene responses in aerial tissues of Arabidopsis.	Plant Physiol	2011
21343415	Network quantitative trait loci mapping of circadian clock outputs identifies metabolic pathway-to-clock linkages in Arabidopsis.	Plant Cell	2011
21358285	JMJD5 Functions in concert with TOC1 in the arabidopsis circadian system.	Plant Signal Behav	2011
21430186	Genomic analysis of circadian clock-, light-, and growth-correlated genes reveals PHYTOCHROME-INTERACTING FACTOR5 as a modulator of auxin signaling in Arabidopsis.	Plant Physiol	2011
21483796	REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock.	PLoS Genet	2011
20921165	Plant biology in the fourth dimension.	Plant Physiol	2010
21115819	Jumonji domain protein JMJD5 functions in both the plant and human circadian systems.	Proc Natl Acad Sci U S A	2010
19805390	REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways.	Proc Natl Acad Sci U S A	2009
19575587	The circadian system in higher plants.	Annu Rev Plant Biol	2009
18710561	Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development.	Genome Biol	2008
19802365	The development of protein microarrays and their applications in DNA-protein and protein-protein interaction analyses of Arabidopsis transcription factors.	Mol Plant	2008
18515502	XAP5 CIRCADIAN TIMEKEEPER coordinates light signals for proper timing of photomorphogenesis and the circadian clock in Arabidopsis.	Plant Cell	2008
17098855	GIGANTEA acts in blue light signaling and has biochemically separable roles in circadian clock and flowering time regulation.	Plant Physiol	2007
17953483	Mechanical stress induces biotic and abiotic stress responses via a novel cis-element.	PLoS Genet	2007
17589502	Rhythmic growth explained by coincidence between internal and external cues.	Nature	2007
17683202	The circadian clock regulates auxin signaling and responses in Arabidopsis.	PLoS Biol	2007
17384162	GIGANTEA regulates phytochrome A-mediated photomorphogenesis independently of its role in the circadian clock.	Plant Physiol	2007
15649364	Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis circadian clock.	Curr Biol	2005
15923346	Positive and negative factors confer phase-specific circadian regulation of transcription in Arabidopsis.	Plant Cell	2005
12007421	Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis.	Curr Biol	2002

1 - 50 of 58

Charles A Seller

Cell and Developmental Biology Department University of California San Diego

Career Start Year 2013

Number of shared co-authors 1

Estefan??a Mancini

Fundacion Instituto Leloir

Career Start Year 2011

Number of shared co-authors 3

Shao-Shan Carol Huang

Salk Institute for Biological Studies

Career Start Year 2009

Number of shared co-authors 0

Fei He

Institute of Genetics and Developmental Biology, Chinese Academy of Sciences

Career Start Year 2007

Number of shared co-authors 0

Molly Megraw

Center for Quantitative Life Sciences, Oregon State University

Career Start Year 2006

Number of shared co-authors 1

Colleen J Doherty

North Carolina State University

Career Start Year 2006

Number of shared co-authors 1

Steven Maere

Ghent University

Career Start Year 2005

Number of shared co-authors 0

Marie-Laure Martin-Magniette

Universite Paris-Saclay, CNRS, University of Evry

Career Start Year 2004

Number of shared co-authors 0

Hong Qiao

Institute for Cellular and Molecular Biology, The University of Texas at Austin

Career Start Year 2004

Number of shared co-authors 0

Julia Foreman

Wellcome Sanger Institute, European Bioinformatics Institute

Career Start Year 2001

Number of shared co-authors 0

Anthony C Bryan

Oak Ridge National Laboratory

Career Start Year 2001

Number of shared co-authors 1

Michael J Considine

Johns Hopkins University School of Medicine

Career Start Year 2001

Number of shared co-authors 0

Changbin Chen

Arizona State University

Career Start Year 2000

Number of shared co-authors 1

V??ctor Quesada

Instituto Universitario de Oncologia, Universidad de Oviedo

Career Start Year 1998

Number of shared co-authors 0

Joris J Benschop

Center for Molecular Medicine, University Medical Center Utrecht

Career Start Year 1998

Number of shared co-authors 1

Christine Queitsch

University of Washington

Career Start Year 1997

Number of shared co-authors 0

Sushma Naithani

Oregon State University

Career Start Year 1997

Number of shared co-authors 1

Leonore Reiser

Carnegie Institution for Science

Career Start Year 1993

Number of shared co-authors 0

Andrew J Schroeder

Harvard Medical School

Career Start Year 1993

Number of shared co-authors 0

Sara E Patterson

UF Genetics Institute, University of Florida

Career Start Year 1992

Number of shared co-authors 0

Seung Y Rhee

Carnegie Institution for Science

Career Start Year 1992

Number of shared co-authors 1

Kevin L Childs

Center for Genomics-Enabled Plant Science, Michigan State University

Career Start Year 1991

Number of shared co-authors 1

Shengqiang Shu

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory

Career Start Year 1990

Number of shared co-authors 1

Robert J Schmitz

University of Georgia

Career Start Year 1989

Number of shared co-authors 2

Erin K O'Shea

Howard Hughes Medical Institute

Career Start Year 1989

Number of shared co-authors 1

Muh-Ching Yee

Stanford University

Career Start Year 1988

Number of shared co-authors 3

John H Doonan

University of Copenhagen

Career Start Year 1985

Number of shared co-authors 0

Eva Huala

Carnegie Institution for Science

Career Start Year 1984

Number of shared co-authors 0

Cathie Martin

John Innes Centre

Career Start Year 1981

Number of shared co-authors 0

Joseph R Ecker

The Salk Institute for Biological Studies

Career Start Year 1973

Number of shared co-authors 5

row(s) 1 - 30 of 30

Steve A Kay

Keck School of Medicine, University of Southern California

Co-authored papers 8

Marcelo J Yanovsky

Fundacion Instituto Leloir

Co-authored papers 3

Satchidananda Panda

The Salk Institute for Biological Studies

Co-authored papers 2

Shajahan Anver

College of Biological Sciences, University of California davis

Co-authored papers 2

Jennifer J Loros

Geisel School of Medicine at Dartmouth

Co-authored papers 1

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 1

Todd C Mockler

Danforth Foundation

Co-authored papers 1

Till Roenneberg

Institutes for Medical Psychology and for Occupational-

Co-authored papers 1

Michael Rosbash

Co-authored papers 1

Paula Duek

University of Geneva

Co-authored papers 1

Martin Zofall

National Cancer Institute, National Institutes of Health

Co-authored papers 1

Jay C Dunlap

Geisel School of Medicine at Dartmouth

Co-authored papers 1

Shiv I S Grewal

National Cancer Institute, National Institutes of Health

Co-authored papers 1

Garret A FitzGerald

Perelman School of Medicine, University of Pennsylvania

Co-authored papers 1

Michael W Young

The Rockefeller University

Co-authored papers 1

Brian A Williams

Co-authored papers 1

Assen Roguev

University of California, USA Quantitative Biosciences Institute (QBI) san francisco

Co-authored papers 1

Hiroki R Ueda

Co-authored papers 1

Andrew C Liu

University of Florida College of Medicine

Co-authored papers 1

Paloma Mas

Universidad Autonoma de Madrid

Co-authored papers 1

Michael Snyder

Stanford University

Co-authored papers 1

Alexander M Crowell

Geisel School of Medicine at Dartmouth

Co-authored papers 1

Karyn A Esser

University of Florida

Co-authored papers 1

1 - 23

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