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Author Details

Jingchun Zhu
University of California at Santa Cruz
2001
24
19
PMIDPaper TitleJournal TitlePublished Year
35294224Safety, Feasibility, and Merits of Longitudinal Molecular Testing of Multiple Metastatic Sites to Inform mTNBC Patient Treatment in the Intensive Trial of Omics in Cancer.JCO Precis Oncol2022
35294224Safety, Feasibility, and Merits of Longitudinal Molecular Testing of Multiple Metastatic Sites to Inform mTNBC Patient Treatment in the Intensive Trial of Omics in Cancer.JCO Precis Oncol2022
32444850Visualizing and interpreting cancer genomics data via the Xena platform.Nat Biotechnol2020
32444850Visualizing and interpreting cancer genomics data via the Xena platform.Nat Biotechnol2020
32636365A user guide for the online exploration and visualization of PCAWG data.Nat Commun2020
32636365A user guide for the online exploration and visualization of PCAWG data.Nat Commun2020
31651965Comparative Tumor RNA Sequencing Analysis for Difficult-to-Treat Pediatric and Young Adult Patients With Cancer.JAMA Netw Open2019
31651965Comparative Tumor RNA Sequencing Analysis for Difficult-to-Treat Pediatric and Young Adult Patients With Cancer.JAMA Netw Open2019
31372595Comparative RNA-Sequencing Analysis Benefits a Pediatric Patient With Relapsed Cancer.JCO Precis Oncol2018
31372595Comparative RNA-Sequencing Analysis Benefits a Pediatric Patient With Relapsed Cancer.JCO Precis Oncol2018
28398314Toil enables reproducible, open source, big biomedical data analyses.Nat Biotechnol2017
28398314Toil enables reproducible, open source, big biomedical data analyses.Nat Biotechnol2017
26733551A Distributed Network for Intensive Longitudinal Monitoring in Metastatic Triple-Negative Breast Cancer.J Natl Compr Canc Netw2016
26733551A Distributed Network for Intensive Longitudinal Monitoring in Metastatic Triple-Negative Breast Cancer.J Natl Compr Canc Netw2016
26536169Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma.N Engl J Med2016
26536169Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma.N Engl J Med2016
25392408The UCSC Cancer Genomics Browser: update 2015.Nucleic Acids Res2015
25392408The UCSC Cancer Genomics Browser: update 2015.Nucleic Acids Res2015
25405470RADIA: RNA and DNA integrated analysis for somatic mutation detection.PLoS One2014
25405470RADIA: RNA and DNA integrated analysis for somatic mutation detection.PLoS One2014
23109555The UCSC Cancer Genomics Browser: update 2013.Nucleic Acids Res2013
24084870Exploring TCGA Pan-Cancer data at the UCSC Cancer Genomics Browser.Sci Rep2013
23109555The UCSC Cancer Genomics Browser: update 2013.Nucleic Acids Res2013
24084870Exploring TCGA Pan-Cancer data at the UCSC Cancer Genomics Browser.Sci Rep2013
22085927Human tRNA genes function as chromatin insulators.EMBO J2012
22391556A DNA hypermethylation module for the stem/progenitor cell signature of cancer.Genome Res2012
22085927Human tRNA genes function as chromatin insulators.EMBO J2012
22391556A DNA hypermethylation module for the stem/progenitor cell signature of cancer.Genome Res2012
21059681The UCSC Cancer Genomics Browser: update 2011.Nucleic Acids Res2011
21059681The UCSC Cancer Genomics Browser: update 2011.Nucleic Acids Res2011
22127213The Human Epigenome Browser at Washington University.Nat Methods2011
22127213The Human Epigenome Browser at Washington University.Nat Methods2011
20529912Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM.Bioinformatics2010
20529912Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM.Bioinformatics2010
19333237The UCSC Cancer Genomics Browser.Nat Methods2009
19333237The UCSC Cancer Genomics Browser.Nat Methods2009
18085818Comparative genomics search for losses of long-established genes on the human lineage.PLoS Comput Biol2007
18085818Comparative genomics search for losses of long-established genes on the human lineage.PLoS Comput Biol2007
17183726A Bayesian network driven approach to model the transcriptional response to nitric oxide in Saccharomyces cerevisiae.PLoS One2006
17183726A Bayesian network driven approach to model the transcriptional response to nitric oxide in Saccharomyces cerevisiae.PLoS One2006
12620119Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray.Genome Biol2003
12929205The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum.PLoS Biol2003
12620119Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray.Genome Biol2003
12929205The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum.PLoS Biol2003
11395429Database verification studies of SWISS-PROT and GenBank.Bioinformatics2001
11239432nompA encodes a PNS-specific, ZP domain protein required to connect mechanosensory dendrites to sensory structures.Neuron2001
11239432nompA encodes a PNS-specific, ZP domain protein required to connect mechanosensory dendrites to sensory structures.Neuron2001
11395429Database verification studies of SWISS-PROT and GenBank.Bioinformatics2001
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Collaborators

Genomics Institute, University of California Santa Cruz
Co-authored papers 17
UC Santa Cruz Genomics Institute, University of California
Co-authored papers 7
UC Santa Cruz Genomics Institute, University of California
Co-authored papers 7
University of California
Co-authored papers 5
University of California at Santa Cruz
Co-authored papers 5
Co-authored papers 4
Genomics Institute, University of California Santa Cruz
Co-authored papers 4
Co-authored papers 4
University of California San Francisco
Co-authored papers 3
Genomics Institute, University of California Santa Cruz
Co-authored papers 3
Co-authored papers 3
La Trobe Institute for Molecular Science, La Trobe University
Co-authored papers 3
Center for Biomolecular Science and Engineering, University of California
Co-authored papers 3
University of British Columbia
Co-authored papers 3
Genomics Institute, University of California Santa Cruz
Co-authored papers 3
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
British Columbia Children's Hospital, The University of British Columbia
Co-authored papers 2
University of Washington
Co-authored papers 2
Co-authored papers 2
University of California Santa Cruz Genomics Institute
Co-authored papers 2
University of California, Santa Cruz Genomics Institute
Co-authored papers 2
Data4Cure Inc.
Co-authored papers 2
Center for Cancer Innovation, University of Washington
Co-authored papers 2
University of Washington, USA Brotman Baty Institute for Precision Medicine
Co-authored papers 2
University of British Columbia
Co-authored papers 2
Harvard University Faculty of Arts and Sciences
Co-authored papers 2
Co-authored papers 2