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Author Details

Li Shen
University of Pennsylvania
2000
233
48
PMIDPaper TitleJournal TitlePublished Year
36396044Genome-wide map of R-loops reveals its interplay with transcription and genome integrity during germ cell meiosis.J Adv Res2023
37634885Brain-wide genome-wide colocalization study for integrating genetics, transcriptomics and brain morphometry in Alzheimer's disease.Neuroimage2023
37961739Modeling Path Importance for Effective Alzheimer's Disease Drug Repurposing.ArXiv2023
37953885An interpretable Alzheimer's disease oligogenic risk score informed by neuroimaging biomarkers improves risk prediction and stratification.Front Aging Neurosci2023
38002954Genome-Wide Association Analysis across Endophenotypes in Alzheimer's Disease: Main Effects and Disease Stage-Specific Interactions.Genes (Basel)2023
37507059Preference matrix guided sparse canonical correlation analysis for mining brain imaging genetic associations in Alzheimer's disease.Methods2023
37876849Multi-Group Tensor Canonical Correlation Analysis.ACM BCB2023
37350917Mining Correlation between Fluid Intelligence and Whole-brain Large Scale Structural Connectivity.AMIA Jt Summits Transl Sci Proc2023
37350896Exploring Automated Machine Learning for Cognitive Outcome Prediction from Multimodal Brain Imaging using STREAMLINE.AMIA Jt Summits Transl Sci Proc2023
37350892Discovering Precision AD Biomarkers with Varying Prognosis Effects in Genetics Driven Subpopulations.AMIA Jt Summits Transl Sci Proc2023
37350880Comparing Amyloid Imaging Normalization Strategies for Alzheimer's Disease Classification using an Automated Machine Learning Pipeline.AMIA Jt Summits Transl Sci Proc2023
37365631Development of complemented comprehensive networks for rapid screening of repurposable drugs applicable to new emerging disease outbreaks.J Transl Med2023
37333190The Genetic Architecture of Multimodal Human Brain Age.bioRxiv2023
37429512AD-BERT: Using pre-trained language model to predict the progression from mild cognitive impairment to Alzheimer's disease.J Biomed Inform2023
36882008Integrative analysis of multi-omics and imaging data with incorporation of biological information via structural Bayesian factor analysis.Brief Bioinform2023
36748000Gene-SGAN: a method for discovering disease subtypes with imaging and genetic signatures via multi-view weakly-supervised deep clustering.ArXiv2023
34700244Diagnosis of obsessive-compulsive disorder via spatial similarity-aware learning and fused deep polynomial network.Med Image Anal2022
38013951Using Optimal Transport to Improve Spherical Harmonic Quantification of Complex Biological Shapes.Proceedings (IEEE Int Conf Bioinformatics Biomed)2022
35590321Identifying Alzheimer's genes via brain transcriptome mapping.BMC Med Genomics2022
35655140Integrative analysis of summary data from GWAS and eQTL studies implicates genes differentially expressed in Alzheimer's disease.BMC Genomics2022
37041884Consistency of Graph Theoretical Measurements of Alzheimer's Disease Fiber Density Connectomes Across Multiple Parcellation Scales.Proceedings (IEEE Int Conf Bioinformatics Biomed)2022
36880061Tensor-Based Multi-Modality Feature Selection and Regression for Alzheimer's Disease Diagnosis.Comput Sci Inf Technol2022
36845995Preference Matrix Guided Sparse Canonical Correlation Analysis for Genetic Study of Quantitative Traits in Alzheimer's Disease.Proceedings (IEEE Int Conf Bioinformatics Biomed)2022
36827208Sparse Interpretation of Graph Convolutional Networks for Multi-Modal Diagnosis of Alzheimer's Disease.Med Image Comput Comput Assist Interv2022
36824448Genomics transformer for diagnosing Parkinson's disease.IEEE EMBS Int Conf Biomed Health Inform2022
36824222Mediation Analysis and Mixed-Effects Models for the Identification of Stage-specific Imaging Genetics Patterns in Alzheimer's Disease.Proceedings (IEEE Int Conf Bioinformatics Biomed)2022
36175853Deep multiview learning to identify imaging-driven subtypes in mild cognitive impairment.BMC Bioinformatics2022
36140686Mining High-Level Imaging Genetic Associations via Clustering AD Candidate Variants with Similar Brain Association Patterns.Genes (Basel)2022
36171548Identifying genes associated with brain volumetric differences through tissue specific transcriptomic inference from GWAS summary data.BMC Bioinformatics2022
36094096Integrating multi-omics summary data using a Mendelian randomization framework.Brief Bioinform2022
35915443Identifying genetic markers enriched by brain imaging endophenotypes in Alzheimer's disease.BMC Med Genomics2022
34890141Identifying highly heritable brain amyloid phenotypes through mining Alzheimer's imaging and sequencing biobank data.Pac Symp Biocomput2022
34890140Identifying imaging genetic associations via regional morphometricity estimation.Pac Symp Biocomput2022
34890137Session Introduction: Big Data Imaging Genomics.Pac Symp Biocomput2022
35086473Genome-Wide association study of quantitative biomarkers identifies a novel locus for alzheimer's disease at 12p12.1.BMC Genomics2022
35237294Genetic Influence Underlying Brain Connectivity Phenotype: A Study on Two Age-Specific Cohorts.Front Genet2022
34871929Multi-task learning based structured sparse canonical correlation analysis for brain imaging genetics.Med Image Anal2022
35262657Characterizing Heterogeneity in Neuroimaging, Cognition, Clinical Symptoms, and Genetics Among Patients With Late-Life Depression.JAMA Psychiatry2022
34498337A meta-analysis of deep brain structural shape and asymmetry abnormalities in 2,833 individuals with schizophrenia compared with 3,929 healthy volunteers via the ENIGMA Consortium.Hum Brain Mapp2022
31634139Multi-Task Sparse Canonical Correlation Analysis with Application to Multi-Modal Brain Imaging Genetics.IEEE/ACM Trans Comput Biol Bioinform2021
33848962A structural enriched functional network: An application to predict brain cognitive performance.Med Image Anal2021
33819146Improved Prediction of Cognitive Outcomes via Globally Aligned Imaging Biomarker Enrichments Over Progressions.IEEE Trans Biomed Eng2021
35098263Topological Learning and Its Application to Multimodal Brain Network Integration.Med Image Comput Comput Assist Interv2021
35299717Interpretable temporal graph neural network for prognostic prediction of Alzheimer's disease using longitudinal neuroimaging data.Proceedings (IEEE Int Conf Bioinformatics Biomed)2021
35299630A Novel Bayesian Semi-parametric Model for Learning Heritable Imaging Traits.Med Image Comput Comput Assist Interv2021
34720862White Matter Integrity and Nicotine Dependence: Evaluating Vertical and Horizontal Pleiotropy.Front Neurosci2021
34387095Progress and Research Priorities in Imaging Genomics for Heart and Lung Disease: Summary of an NHLBI Workshop.Circ Cardiovasc Imaging2021
33936415Polygenic mediation analysis of Alzheimer's disease implicated intermediate amyloid imaging phenotypes.AMIA Annu Symp Proc2021
31581090Identify Consistent Cross-Modality Imaging Genetic Patterns via Discriminant Sparse Canonical Correlation Analysis.IEEE/ACM Trans Comput Biol Bioinform2021
31016571Hierarchical Structured Sparse Learning for Schizophrenia Identification.Neuroinformatics2020
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Collaborators

Andrew J Saykin
Indiana University School of Medicine
Co-authored papers 158
Shannon L Risacher
Indiana University School of Medicine
Co-authored papers 102
Sungeun Kim
Center for Neuroimaging, Indiana University School of Medicine
Co-authored papers 61
Jingwen Yan
Indiana University Purdue University Indianapolis (IUPUI)
Co-authored papers 51
Kwangsik Nho
Indiana University School of Medicine
Co-authored papers 51
Xiaohui Yao
Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences
Co-authored papers 46
Michael W Weiner
University of California San Francisco
Co-authored papers 38
Heng Huang
University of Pittsburgh
Co-authored papers 35
Tatiana Foroud
Indiana University School of Medicine
Co-authored papers 33
Jason H Moore
Cedars-Sinai Medical Center
Co-authored papers 33
Kefei Liu
Suzhou Institute for Advanced Research, University of Science and Technology of China
Co-authored papers 25
Clifford R Jack
Mayo Clinic Rochester
Co-authored papers 25
Paul M Thompson
University of Southern California
Co-authored papers 23
Steven G Potkin
University of California Irvine
Co-authored papers 19
Arthur W Toga
Keio University School of Medicine
Co-authored papers 18
Robert C Green
Brigham and Women's Hospital, Broad Institute Ariadne Labs and Harvard Medical School
Co-authored papers 17
Matthew J Huentelman
The Translational Genomics Research Institute (TGen)
Co-authored papers 16
Ronald C Petersen
Mayo Clinic Rochester
Co-authored papers 16
Paul S Aisen
Alzheimer's Therapeutic Research Institute, University of Southern California
Co-authored papers 16
Leslie M Shaw
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 12
Jason L Stein
Co-authored papers 12
John Q Trojanowski
University of Pennsylvania
Co-authored papers 11
David C Glahn
Co-authored papers 9
Ingrid Agartz
Diakonhjemmet Hospital
Co-authored papers 9
William J Jagust
Helen Wills Neuroscience Institute, University of California Berkeley
Co-authored papers 9
Neda Jahanshad
University of Southern California
Co-authored papers 9
Ole A Andreassen
Oslo University Hospital & Institute of Clinical Medicine, University of Oslo
Co-authored papers 9
Martin R Farlow
Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM)
Co-authored papers 8
Simon Lovestone
Janssen Medical Ltd
Co-authored papers 8
Andrew Simmons
Institute of Psychiatry, King's College London
Co-authored papers 8
Release 1.2