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Author Details

Christine Orengo
University College London, Institute of Structural and Molecular Biology
1989
249
73
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36350672InterPro in 2022.Nucleic Acids Res2023
36350672InterPro in 2022.Nucleic Acids Res2023
36410474Mapping the Constrained Coding Regions in the Human Genome to Their Corresponding Proteins.J Mol Biol2023
37787768Broad functional profiling of fission yeast proteins using phenomics and machine learning.Elife2023
36830646KinFams: De-Novo Classification of Protein Kinases Using CATH Functional Units.Biomolecules2023
36828268ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models.J Mol Biol2023
36648327CATHe: detection of remote homologues for CATH superfamilies using embeddings from protein language models.Bioinformatics2023
36504138Novel machine learning approaches revolutionize protein knowledge.Trends Biochem Sci2023
36755055AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms.Commun Biol2023
36807079The opportunities and challenges posed by the new generation of deep learning-based protein structure predictors.Curr Opin Struct Biol2023
37354790Protein diversification through post-translational modifications, alternative splicing, and gene duplication.Curr Opin Struct Biol2023
37787768Broad functional profiling of fission yeast proteins using phenomics and machine learning.Elife2023
37354790Protein diversification through post-translational modifications, alternative splicing, and gene duplication.Curr Opin Struct Biol2023
36648327CATHe: detection of remote homologues for CATH superfamilies using embeddings from protein language models.Bioinformatics2023
36807079The opportunities and challenges posed by the new generation of deep learning-based protein structure predictors.Curr Opin Struct Biol2023
36830646KinFams: De-Novo Classification of Protein Kinases Using CATH Functional Units.Biomolecules2023
36504138Novel machine learning approaches revolutionize protein knowledge.Trends Biochem Sci2023
36828268ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models.J Mol Biol2023
36755055AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms.Commun Biol2023
36410474Mapping the Constrained Coding Regions in the Human Genome to Their Corresponding Proteins.J Mol Biol2023
35134112Srinivasan (1962-2021) in Bioinformatics and beyond.Bioinformatics2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
35702380Contrastive learning on protein embeddings enlightens midnight zone.NAR Genom Bioinform2022
35507259Three-dimensional Structure Databases of Biological Macromolecules.Methods Mol Biol2022
35758800Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia.Bioinformatics2022
35641150Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs.Brief Bioinform2022
35883853Profiling the Site of Protein CoAlation and Coenzyme A Stabilization Interactions.Antioxidants (Basel)2022
35624123Transmission of SARS-CoV-2 from humans to animals and potential host adaptation.Nat Commun2022
36408455Structural and energetic analyses of SARS-CoV-2 <i>N</i>-terminal domain characterise sugar binding pockets and suggest putative impacts of variants on COVID-19 transmission.Comput Struct Biotechnol J2022
364488473D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources.Gigascience2022
36516231Dissecting peripheral protein-membrane interfaces.PLoS Comput Biol2022
35035776Exploiting protein family and protein network data to identify novel drug targets for bladder cancer.Oncotarget2022
35033002Assigning protein function from domain-function associations using DomFun.BMC Bioinformatics2022
35134112Srinivasan (1962-2021) in Bioinformatics and beyond.Bioinformatics2022
35507259Three-dimensional Structure Databases of Biological Macromolecules.Methods Mol Biol2022
35702380Contrastive learning on protein embeddings enlightens midnight zone.NAR Genom Bioinform2022
35641150Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs.Brief Bioinform2022
35758800Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia.Bioinformatics2022
35624123Transmission of SARS-CoV-2 from humans to animals and potential host adaptation.Nat Commun2022
364488473D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources.Gigascience2022
36408455Structural and energetic analyses of SARS-CoV-2 <i>N</i>-terminal domain characterise sugar binding pockets and suggest putative impacts of variants on COVID-19 transmission.Comput Struct Biotechnol J2022
36516231Dissecting peripheral protein-membrane interfaces.PLoS Comput Biol2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
35883853Profiling the Site of Protein CoAlation and Coenzyme A Stabilization Interactions.Antioxidants (Basel)2022
35035776Exploiting protein family and protein network data to identify novel drug targets for bladder cancer.Oncotarget2022
35033002Assigning protein function from domain-function associations using DomFun.BMC Bioinformatics2022
33348379The impact of structural bioinformatics tools and resources on SARS-CoV-2 research and therapeutic strategies.Brief Bioinform2021
36700104Letter by the ISCB President.Bioinform Adv2021
34225010Computational approaches to predict protein functional families and functional sites.Curr Opin Struct Biol2021
34041266Tracing Evolution Through Protein Structures: Nature Captured in a Few Thousand Folds.Front Mol Biosci2021
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Collaborators

Ian Sillitoe
University College London
Co-authored papers 62
Jonathan G Lees
University College London, Institute of Structural and Molecular Biology
Co-authored papers 44
David Lee
University of Bristol
Co-authored papers 35
Natalie L Dawson
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Corin Yeats
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University College London
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Medical Research Council Laboratory of Molecular Biology
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University of Oxford
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Technical University of Munich (TUM)
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European Bioinformatics Institute
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Paul D Thomas
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Peer Bork
University of Wurzburg
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Christian J A Sigrist
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Darren A Natale
Georgetown University Medical Center
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Robert D Finn
European Bioinformatics Institute
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Alex Bateman
European Bioinformatics Institute (EMBL-EBI)
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Alex Mitchell
European Bioinformatics Institute
Co-authored papers 8
Ivica Letunic
Co-authored papers 8
Cathy H Wu
Georgetown University Medical Center
Co-authored papers 7
Silvio C E Tosatto
University of Padova
Co-authored papers 7
Teresa K Attwood
Co-authored papers 7
Catherine Rivoire
carnegie mellon university
Co-authored papers 6
Rodrigo Lopez
Co-authored papers 6
Mark Dibley
Co-authored papers 6
Michael J E Sternberg
Imperial College London
Co-authored papers 6
Daniel H Haft
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 6
Huaiyu Mi
University of Southern California
Co-authored papers 6
Release 1.2