Author details

Full Name

Artyom A Alekseyenko

Affiliation

ORCID

Career Start Year

1996

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37119804	Cell state-dependent chromatin targeting in NUT carcinoma.		2023
37131839	Cell state-dependent chromatin targeting in NUT carcinoma.		2023
34285087	Chemical Screen Identifies Diverse and Novel Histone Deacetylase Inhibitors as Repressors of NUT Function: Implications for NUT Carcinoma Pathogenesis and Treatment.	Mol Cancer Res	2021
30139738	Z4 Complex Member Fusions in NUT Carcinoma: Implications for a Novel Oncogenic Mechanism.	Molecular Cancer Research	2018
28484033	Ectopic protein interactions within BRD4-chromatin complexes drive oncogenic megadomain formation in NUT midline carcinoma.	Proceedings of the National Academy of Sciences of the United States of America	2017
27698495	The Oncoprotein BRD4-NUT Generates Aberrant Histone Modification Patterns.	PLoS ONE	2016
26831069	Streamlined discovery of cross-linked chromatin complexes and associated histone modifications by mass spectrometry.	Proceedings of the National Academy of Sciences of the United States of America	2016
26063573	Sex comb on midleg (Scm) is a functional link between PcG-repressive complexes in Drosophila.	Genes Dev	2015
25559106	BioTAP-XL: Cross-linking/Tandem Affinity Purification to Study DNA Targets, RNA, and Protein Components of Chromatin-Associated Complexes.	Current Protocols in Molecular Biology	2015
26220994	The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains.	Genes and Development	2015
25164756	Comparative analysis of metazoan chromatin organization.	Nature	2014
24500429	Transcriptional control of a whole chromosome: emerging models for dosage compensation.	Nat Struct Mol Biol	2014
24550272	Reciprocal interactions of human C10orf12 and C17orf96 with PRC2 revealed by BioTAP-XL cross-linking and affinity purification.	Proceedings of the National Academy of Sciences of the United States of America	2014
24990964	Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs.	Genes Dev	2014
23295261	Chromatin proteins captured by ChIP-mass spectrometry are linked to dosage compensation in Drosophila.	Nat Struct Mol Biol	2013
24265597	The epigenome of evolving Drosophila neo-sex chromosomes: dosage compensation and heterochromatin formation.	PLoS Biology	2013
24183666	"Jump start and gain" model for dosage compensation in Drosophila based on direct sequencing of nascent transcripts.	Cell Rep	2013
23599463	Comment on "Drosophila dosage compensation involves enhanced Pol II recruitment to male X-linked promoters".	Science	2013
23630075	Conservation and de novo acquisition of dosage compensation on newly evolved sex chromosomes in Drosophila.	Genes Dev	2013
23028361	Enrichment of HP1a on Drosophila chromosome 4 genes creates an alternate chromatin structure critical for regulation in this heterochromatic domain.	PLoS Genet	2012
22570616	Sequence-specific targeting of dosage compensation in Drosophila favors an active chromatin context.	PLoS Genet	2012
22767387	Nature and function of insulator protein binding sites in the Drosophila genome.	Genome Res	2012
22143764	The genomic binding sites of a noncoding RNA.	Proc Natl Acad Sci U S A	2011
21179089	Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.	Nature	2011
21177972	Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin.	Genome Res	2011
21131980	An assessment of histone-modification antibody quality.	Nat Struct Mol Biol	2011
21177974	Identification of functional elements and regulatory circuits by Drosophila modENCODE.	Science	2010
19797766	Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X.	Genes Dev	2009
18724933	A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome.	Cell	2008
17936709	MSL complex is attracted to genes marked by H3K36 trimethylation using a sequence-independent mechanism.	Mol Cell	2007
17592629	Normalization and experimental design for ChIP-chip data.	BMC Bioinformatics	2007
16583218	DNA underreplication in intercalary heterochromatin regions in polytene chromosomes of Drosophila melanogaster correlates with the formation of partial chromosomal aberrations and ectopic pairing.	Chromosoma	2006
17381321	MSL complex associates with clusters of actively transcribed genes along the Drosophila male X chromosome.	Cold Spring Harb Symp Quant Biol	2006
16547173	High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome.	Genes Dev	2006
15928082	Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories.	Proc Natl Acad Sci U S A	2005
14976302	Molecular biology. Filling gaps in genome organization.	Science	2004
15229655	Sequence-specific targeting of MSL complex regulates transcription of the roX RNA genes.	EMBO Journal	2004
12644953	Influence of the SuUR gene on intercalary heterochromatin in Drosophila melanogaster polytene chromosomes.	Chromosoma	2003
14579126	The MSL complex levels are critical for its correct targeting to the chromosomes in Drosophila melanogaster.	Chromosoma	2003
12723705	Intercalary heterochromatin in Drosophila melanogaster polytene chromosomes and the problem of genetic silencing.	Genetica	2003
14668376	Effect of the Suppressor of Underreplication (SuUR) gene on position-effect variegation silencing in Drosophila melanogaster.	Genetics	2003
12111333	Dosage compensation and intercalary heterochromatin in X chromosomes of Drosophila melanogaster.	Chromosoma	2002
12111334	Microdissection and sequence analysis of pericentric heterochromatin from the Drosophila melanogastermutant Suppressor of Underreplication.	Chromosoma	2002
11136231	The bithorax complex of Drosophila melanogaster: Underreplication and morphology in polytene chromosomes.	Proceedings of the National Academy of Sciences of the United States of America	2001
9928929	Dynamic organization of the beta-heterochromatin in the Drosophila melanogaster polytene X chromosome.		1999
9636184	Su(UR)ES: a gene suppressing DNA underreplication in intercalary and pericentric heterochromatin of Drosophila melanogaster polytene chromosomes.	Proceedings of the National Academy of Sciences of the United States of America	1998
8939824	Alpha and beta heterochromatin in polytene chromosome 2 of Drosophila melanogaster.	Chromosoma	1996