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| 37638652 | Eliminating genes for a two-component system increases PHB productivity in Cupriavidus basilensis 4G11 under PHB suppressing, nonstress conditions. | Biotechnol Bioeng | 2024 |
| 36824877 | An integrated transcriptomics-functional genomics approach reveals a small RNA that modulates <i>Bacteroides thetaiotaomicron</i> sensitivity to tetracyclines. | bioRxiv | 2023 |
| 37598339 | Dynamic genetic adaptation of Bacteroides thetaiotaomicron during murine gut colonization. | Cell Rep | 2023 |
| 37596312 | Geochemical constraints on bacteriophage infectivity in terrestrial environments. | ISME Commun | 2023 |
| 37712143 | Simvastatin induces human gut bacterial cell surface genes. | Mol Microbiol | 2023 |
| 37651474 | Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites. | PLoS Genet | 2023 |
| 37693407 | A mutant fitness compendium in Bifidobacteria reveals molecular determinants of colonization and host-microbe interactions. | bioRxiv | 2023 |
| 37824485 | A chemically-defined growth medium to support Lactobacillus-Acetobacter sp. community analysis. | PLoS One | 2023 |
| 37040165 | 4'-Deoxypyridoxine disrupts vitamin B<sub>6</sub> homeostasis in <i>Escherichia coli</i> K12 through combined inhibition of cumulative B<sub>6</sub> uptake and PLP-dependent enzyme activity. | Microbiology (Reading) | 2023 |
| 37065130 | Large-scale genetic characterization of the model sulfate-reducing bacterium, <i>Desulfovibrio vulgaris</i> Hildenborough. | Front Microbiol | 2023 |
| 36805702 | Multicopy suppressor screens reveal convergent evolution of single-gene lysis proteins. | Nat Chem Biol | 2023 |
| 35080906 | Study of the Production of Poly(Hydroxybutyrate-<i>co</i>-Hydroxyhexanoate) and Poly(Hydroxybutyrate-<i>co</i>-Hydroxyvalerate-<i>co-</i>Hydroxyhexanoate) in Rhodospirillum rubrum. | Appl Environ Microbiol | 2022 |
| 35737807 | Development of a Markerless Deletion Mutagenesis System in Nitrate-Reducing Bacterium Rhodanobacter denitrificans. | Appl Environ Microbiol | 2022 |
| 35706385 | Genome-wide identification of fitness determinants in the Xanthomonas campestris bacterial pathogen during early stages of plant infection. | New Phytol | 2022 |
| 35649364 | Caulobacter lipid A is conditionally dispensable in the absence of fur and in the presence of anionic sphingolipids. | Cell Rep | 2022 |
| 35694313 | A Defined Medium for Cultivation and Exometabolite Profiling of Soil Bacteria. | Front Microbiol | 2022 |
| 35417463 | Filling gaps in bacterial catabolic pathways with computation and high-throughput genetics. | PLoS Genet | 2022 |
| 36527020 | Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron. | BMC Biol | 2022 |
| 36070752 | Design, construction, and in vivo augmentation of a complex gut microbiome. | Cell | 2022 |
| 35961013 | A roadmap for the functional annotation of protein families: a community perspective. | Database (Oxford) | 2022 |
| 35285712 | Nitrogen Metabolism in Pseudomonas putida: Functional Analysis Using Random Barcode Transposon Sequencing. | Appl Environ Microbiol | 2022 |
| 34873292 | Species- and site-specific genome editing in complex bacterial communities. | Nat Microbiol | 2022 |
| 35107332 | Genomic Features and Pervasive Negative Selection in <i>Rhodanobacter</i> Strains Isolated from Nitrate and Heavy Metal Contaminated Aquifer. | Microbiol Spectr | 2022 |
| 34021295 | Rapid ordering of barcoded transposon insertion libraries of anaerobic bacteria. | Nat Protoc | 2021 |
| 33657378 | Functional genetics of human gut commensal Bacteroides thetaiotaomicron reveals metabolic requirements for growth across environments. | Cell Rep | 2021 |
| 33767674 | Microbial Community Field Surveys Reveal Abundant <i>Pseudomonas</i> Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes. | Front Microbiol | 2021 |
| 33649553 | Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins. | ISME J | 2021 |
| 33541873 | Draft Genome Sequence of Methanothermobacter thermautotrophicus WHS, a Thermophilic Hydrogenotrophic Methanogen from Washburn Hot Springs in Yellowstone National Park, USA. | Microbiol Resour Announc | 2021 |
| 33737356 | Deletion Mutants, Archived Transposon Library, and Tagged Protein Constructs of the Model Sulfate-Reducing Bacterium Desulfovibrio vulgaris Hildenborough. | Microbiol Resour Announc | 2021 |
| 33534785 | Four families of folate-independent methionine synthases. | PLoS Genet | 2021 |
| 34910616 | The genetic basis of phage susceptibility, cross-resistance and host-range in <i>Salmonella</i>. | Microbiology (Reading) | 2021 |
| 34432491 | Deciphering Microbial Metal Toxicity Responses via Random Bar Code Transposon Site Sequencing and Activity-Based Metabolomics. | Appl Environ Microbiol | 2021 |
| 34726495 | Genome-Wide Identification of Tomato Xylem Sap Fitness Factors for Three Plant-Pathogenic <i>Ralstonia</i> Species. | mSystems | 2021 |
| 34184913 | Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance. | mSystems | 2021 |
| 33964456 | Engineering Pseudomonas putida for efficient aromatic conversion to bioproduct using high throughput screening in a bioreactor. | Metab Eng | 2021 |
| 34360661 | Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant-Microbe Interactions. | Int J Mol Sci | 2021 |
| 34050180 | Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics. | Nat Commun | 2021 |
| 32372050 | Selective carbon sources influence the end products of microbial nitrate respiration. | ISME J | 2020 |
| 33193240 | Characterization of a Metal-Resistant <i>Bacillus</i> Strain With a High Molybdate Affinity ModA From Contaminated Sediments at the Oak Ridge Reservation. | Front Microbiol | 2020 |
| 33323518 | Diverse Bacterial Genes Modulate Plant Root Association by Beneficial Bacteria. | mBio | 2020 |
| 33293380 | Identification of a Novel Cobamide Remodeling Enzyme in the Beneficial Human Gut Bacterium Akkermansia muciniphila. | mBio | 2020 |
| 33122416 | Draft Genome Sequence of <i>Bacillus</i> sp. Strain EB106-08-02-XG196, Isolated from High-Nitrate-Contaminated Sediment. | Microbiol Resour Announc | 2020 |
| 32576650 | GapMind: Automated Annotation of Amino Acid Biosynthesis. | mSystems | 2020 |
| 32826213 | Fatty Acid and Alcohol Metabolism in Pseudomonas putida: Functional Analysis Using Random Barcode Transposon Sequencing. | Appl Environ Microbiol | 2020 |
| 32793173 | Iron Supplementation Eliminates Antagonistic Interactions Between Root-Associated Bacteria. | Front Microbiol | 2020 |
| 32651203 | Photoheterotrophic Assimilation of Valerate and Associated Polyhydroxyalkanoate Production by <i>Rhodospirillum rubrum</i>. | Appl Environ Microbiol | 2020 |
| 32986776 | Distinctiveness of genes contributing to growth of Pseudomonas syringae in diverse host plant species. | PLoS One | 2020 |
| 32332139 | Covert Cross-Feeding Revealed by Genome-Wide Analysis of Fitness Determinants in a Synthetic Bacterial Mutualism. | Appl Environ Microbiol | 2020 |
| 32434546 | New perspectives on butyrate assimilation in Rhodospirillum rubrum S1H under photoheterotrophic conditions. | BMC Microbiol | 2020 |
| 30659179 | Dual-barcoded shotgun expression library sequencing for high-throughput characterization of functional traits in bacteria. | Nat Commun | 2019 |