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Author Details

Liyou Wu
Institute for Environmental Genomics, University of Oklahoma
2000
146
56
PMIDPaper TitleJournal TitlePublished Year
38038441Effects of error, chimera, bias, and GC content on the accuracy of amplicon sequencing.mSystems2023
35420482Temporal Dynamics of Bacterial Communities along a Gradient of Disturbance in a U.S. Southern Plains Agroecosystem.mBio2022
35697795Reduction of microbial diversity in grassland soil is driven by long-term climate warming.Nat Microbiol2022
33305411Winter warming rapidly increases carbon degradation capacities of fungal communities in tundra soil: Potential consequences on carbon stability.Mol Ecol2021
33612833Synergistic epistasis enhances the co-operativity of mutualistic interspecies interactions.ISME J2021
32871382Microbial functional genes commonly respond to elevated carbon dioxide.Environ Int2020
32994415Gene-informed decomposition model predicts lower soil carbon loss due to persistent microbial adaptation to warming.Nat Commun2020
30911147Climate warming accelerates temporal scaling of grassland soil microbial biodiversity.Nat Ecol Evol2019
31213523Functional Gene Array-Based Ultrasensitive and Quantitative Detection of Microbial Populations in Complex Communities.mSystems2019
31285347Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths.Proc Natl Acad Sci U S A2019
31536680Plant-microbe networks in soil are weakened by century-long use of inorganic fertilizers.Microb Biotechnol2019
30808694Long-Term Warming in Alaska Enlarges the Diazotrophic Community in Deep Soils.mBio2019
28715138Microbial functional diversity covaries with permafrost thaw-induced environmental heterogeneity in tundra soil.Glob Chang Biol2018
30051570Spatial scaling of forest soil microbial communities across a temperature gradient.Environ Microbiol2018
30154760Elevated CO<sub>2</sub> and Warming Altered Grassland Microbial Communities in Soil Top-Layers.Front Microbiol2018
29937762Microbial Interactions With Dissolved Organic Matter Drive Carbon Dynamics and Community Succession.Front Microbiol2018
29904372Taxonomic and Functional Responses of Soil Microbial Communities to Annual Removal of Aboveground Plant Biomass.Front Microbiol2018
30093611More replenishment than priming loss of soil organic carbon with additional carbon input.Nat Commun2018
30038871Biases during DNA extraction affect characterization of the microbiota associated with larvae of the Pacific white shrimp, <i>Litopenaeus vannamei</i>.PeerJ2018
29851205Successional change in species composition alters climate sensitivity of grassland productivity.Glob Chang Biol2018
29463661Microbial Functional Gene Diversity Predicts Groundwater Contamination and Ecosystem Functioning.mBio2018
29339824Oral microbiota of periodontal health and disease and their changes after nonsurgical periodontal therapy.ISME J2018
28585533Correspondence: Reply to 'Analytical flaws in a continental-scale forest soil microbial diversity study'.Nat Commun2017
28437572Nearly a decade-long repeatable seasonal diversity patterns of bacterioplankton communities in the eutrophic Lake Donghu (Wuhan, China).Mol Ecol2017
28300407Dynamic Succession of Groundwater Sulfate-Reducing Communities during Prolonged Reduction of Uranium in a Contaminated Aquifer.Environ Sci Technol2017
28453559Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform.PLoS One2017
28430189Warming enhances old organic carbon decomposition through altering functional microbial communities.ISME J2017
28475654Bacterial community and arsenic functional genes diversity in arsenic contaminated soils from different geographic locations.PLoS One2017
28500044RpoN (Ï¿<sup>54</sup>) Is Required for Floc Formation but Not for Extracellular Polysaccharide Biosynthesis in a Floc-Forming Aquincola tertiaricarbonis Strain.Appl Environ Microbiol2017
29079614Divergent Responses of Forest Soil Microbial Communities under Elevated CO<sub>2</sub> in Different Depths of Upper Soil Layers.Appl Environ Microbiol2017
29216322Correction: Bacterial community and arsenic functional genes diversity in arsenic contaminated soils from different geographic locations.PLoS One2017
29138306Key Metabolites and Mechanistic Changes for Salt Tolerance in an Experimentally Evolved Sulfate-Reducing Bacterium, <i>Desulfovibrio vulgaris</i>.mBio2017
28597589Enhanced decomposition of stable soil organic carbon and microbial catabolic potentials by long-term field warming.Glob Chang Biol2017
27048805Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community.mBio2016
26280746The Diversity and Co-occurrence Patterns of Nâ¿¿-Fixing Communities in a COâ¿¿-Enriched Grassland Ecosystem.Microb Ecol2016
27677789Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming.mBio2016
27703234A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom.Sci Rep2016
27933054<i>NifH</i>-Harboring Bacterial Community Composition across an Alaskan Permafrost Thaw Gradient.Front Microbiol2016
27199978Warming Alters Expressions of Microbial Functional Genes Important to Ecosystem Functioning.Front Microbiol2016
27199914Metagenomics Reveals Pervasive Bacterial Populations and Reduced Community Diversity across the Alaska Tundra Ecosystem.Front Microbiol2016
27377774Temperature mediates continental-scale diversity of microbes in forest soils.Nat Commun2016
27130138Environmental filtering decreases with fish development for the assembly of gut microbiota.Environ Microbiol2016
27085668Biogeographic patterns of soil diazotrophic communities across six forests in North America.Mol Ecol2016
26791504Hybridization of Environmental Microbial Community Nucleic Acids by GeoChip.Methods Mol Biol2016
25424441Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska.Mol Ecol2015
26372223Microbial Community Dynamics and Activity Link to Indigo Production from Indole in Bioaugmented Activated Sludge Systems.PLoS One2015
26583008Comparative metagenomics reveals impact of contaminants on groundwater microbiomes.Front Microbiol2015
26284038Denitrifying and diazotrophic community responses to artificial warming in permafrost and tallgrass prairie soils.Front Microbiol2015
26084274Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis.BMC Microbiol2015
25852161Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity.mBio2015
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Collaborators

Jizhong Zhou
Institute for Environmental Genomics, University of Oklahoma
Co-authored papers 140
Zhili He
Environmental Microbiomics Research Center, Sun Yat-Sen University
Co-authored papers 75
Ye Deng
Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences
Co-authored papers 52
Yunfeng Yang
Tsinghua University
Co-authored papers 20
Matthew W Fields
Center for Biofilm Engineering (CBE), Montana State University
Co-authored papers 16
Terry C Hazen
University of Tennessee
Co-authored papers 16
Adam P Arkin
Lawrence Berkeley National Laboratory
Co-authored papers 14
Christopher L Hemme
University of Rhode Island
Co-authored papers 12
Aifen Zhou
University of Oklahoma
Co-authored papers 10
Tingfen Yan
Center for Precision Health Research, National Human Genome Research Institute
Co-authored papers 9
Anthony V Palumbo
Oak Ridge National Laboratory
Co-authored papers 7
Eric J Alm
Massachusetts Institute of Technology 21 Ames St. Cambridge
Co-authored papers 6
David A Stahl
University of Washington
Co-authored papers 5
Dong Xu
University of Missouri
Co-authored papers 3
Edward M Rubin
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Qiang He
University of Tennessee
Co-authored papers 3
Zamin K Yang
Oak Ridge National Laboratory
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Kristina L Hillesland
University of Washington Bothell
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Feng Luo
Clemson University
Co-authored papers 2
Ying Xu
Oak Ridge National Laboratory
Co-authored papers 2
Katherine Huang
Broad Institute of MIT and Harvard
Co-authored papers 2
Paul D Adams
Lawrence Berkeley National Laboratory
Co-authored papers 2
Patrick S G Chain
Los Alamos National Laboratory
Co-authored papers 2
Romy Chakraborty
Lawrence Berkeley National Laboratory
Co-authored papers 2
Nitin S Baliga
Institute for Systems Biology
Co-authored papers 2
Dawn M Klingeman
Oak Ridge National Laboratory
Co-authored papers 2
Judy D Wall
University of Missouri
Co-authored papers 2
Daniel P Harris
Case Western Reserve University
Co-authored papers 2
Dwayne A Elias
Oak Ridge National Laboratory
Co-authored papers 2
Grant M Zane
University of Missouri
Co-authored papers 2
Release 1.2