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Author Details

Andrew Wen
Mayo Clinic
2017
42
10
PMIDPaper TitleJournal TitlePublished Year
36747787Predicting Physiological Response in Heart Failure Management: A Graph Representation Learning Approach using Electronic Health Records.medRxiv2023
37479735The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era.NPJ Digit Med2023
37368483Acquisition of a Lexicon for Family History Information: Bidirectional Encoder Representations From Transformers-Assisted Sublanguage Analysis.JMIR Med Inform2023
37128369Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator.AMIA Annu Symp Proc2023
36550266Endovascular treatment over 24 hours after ischemic stroke onset: a single-center retrospective study.Neuroradiology2023
35077901Developing an ETL tool for converting the PCORnet CDM into the OMOP CDM to facilitate the COVID-19 data integration.J Biomed Inform2022
35649342BETA: a comprehensive benchmark for computational drug-target prediction.Brief Bioinform2022
35672994The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records.Stud Health Technol Inform2022
35701544Computational drug repurposing based on electronic health records: a scoping review.NPJ Digit Med2022
35854735Assessment of Data Quality Variability across Two EHR Systems through a Case Study of Post-Surgical Complications.AMIA Jt Summits Transl Sci Proc2022
35917480Assessment of Electronic Health Record for Cancer Research and Patient Care Through a Scoping Review of Cancer Natural Language Processing.JCO Clin Cancer Inform2022
34983060MedTator: a serverless annotation tool for corpus development.Bioinformatics2022
35316697A hybrid model to identify fall occurrence from electronic health records.Int J Med Inform2022
35239951Ascertainment of Delirium Status Using Natural Language Processing From Electronic Health Records.J Gerontol A Biol Sci Med Sci2022
35171108Patient Portal Messaging for Asynchronous Virtual Care During the COVID-19 Pandemic: Retrospective Analysis.JMIR Hum Factors2022
35261092Midwest rural-urban disparities in use of patient online services for COVID-19.J Rural Health2022
33321199An aberration detection-based approach for sentinel syndromic surveillance of COVID-19 and other novel influenza-like illnesses.J Biomed Inform2021
34457178CQL4NLP: Development and Integration of FHIR NLP Extensions in Clinical Quality Language for EHR-driven Phenotyping.AMIA Jt Summits Transl Sci Proc2021
34714247Developing a RadLex-Based Named Entity Recognition Tool for Mining Textual Radiology Reports: Development and Performance Evaluation Study.J Med Internet Res2021
34032581Leveraging Genetic Reports and Electronic Health Records for the Prediction of Primary Cancers: Algorithm Development and Validation Study.JMIR Med Inform2021
31885036Drug-target prediction utilizing heterogeneous bio-linked network embeddings.Brief Bioinform2021
33160272Modeling cancer clinical trials using HL7 FHIR to support downstream applications: A case study with colorectal cancer data.Int J Med Inform2021
32134686Developing an FHIR-Based Computational Pipeline for Automatic Population of Case Report Forms for Colorectal Cancer Clinical Trials Using Electronic Health Records.JCO Clin Cancer Inform2020
33215074Evaluation of patient-level retrieval from electronic health record data for a cohort discovery task.JAMIA Open2020
32607483Adapting and evaluating a deep learning language model for clinical why-question answering.JAMIA Open2020
32768446Clinical concept extraction: A methodology review.J Biomed Inform2020
33021486Implementation of a Cohort Retrieval System for Clinical Data Repositories Using the Observational Medical Outcomes Partnership Common Data Model: Proof-of-Concept System Validation.JMIR Med Inform2020
32530430Detecting and Filtering Immune-Related Adverse Events Signal Based on Text Mining and Observational Health Data Sciences and Informatics Common Data Model: Framework Development Study.JMIR Med Inform2020
32477694Integrating Electronic Health Record Data into the ADEpedia-on-OHDSI Platform for Improved Signal Detection: A Case Study of Immune-related Adverse Events.AMIA Jt Summits Transl Sci Proc2020
30738946ADEpedia-on-OHDSI: A next generation pharmacovigilance signal detection platform using the OHDSI common data model.J Biomed Inform2019
31872069Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation.NPJ Digit Med2019
32025655Developing a scalable FHIR-based clinical data normalization pipeline for standardizing and integrating unstructured and structured electronic health record data.JAMIA Open2019
31709390Test collections for electronic health record-based clinical information retrieval.JAMIA Open2019
31821152Detecting Lifestyle Risk Factors for Chronic Kidney Disease With Comorbidities: Association Rule Mining Analysis of Web-Based Survey Data.J Med Internet Res2019
31259028Evaluating the Impact of Dictionary Updates on Automatic Annotations Based on Clinical NLP Systems.AMIA Jt Summits Transl Sci Proc2019
31622801Developing a FHIR-based EHR phenotyping framework: A case study for identification of patients with obesity and multiple comorbidities from discharge summaries.J Biomed Inform2019
31255713HPO2Vec+: Leveraging heterogeneous knowledge resources to enrich node embeddings for the Human Phenotype Ontology.J Biomed Inform2019
30305261Utilization of Electronic Medical Records and Biomedical Literature to Support the Diagnosis of Rare Diseases Using Data Fusion and Collaborative Filtering Approaches.JMIR Med Inform2018
29888045Integrating Structured and Unstructured EHR Data Using an FHIR-based Type System: A Case Study with Medication Data.AMIA Jt Summits Transl Sci Proc2018
30058702Clinical study on the early application and ideal dosage of urokinase after surgery for hypertensive intracerebral hemorrhage.Eur Rev Med Pharmacol Sci2018
30815098Standardizing Heterogeneous Annotation Corpora Using HL7 FHIR for Facilitating their Reuse and Integration in Clinical NLP.AMIA Annu Symp Proc2018
29295172Aligned-Layer Text Search in Clinical Notes.Stud Health Technol Inform2017
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Collaborators

Sijia Liu
Mayo Clinic, University at Buffalo - North Campus
Co-authored papers 22
Hongfang Liu
Mayo Clinic
Co-authored papers 21
Sunyang Fu
Mayo Clinic
Co-authored papers 15
Liwei Wang
University of Texas Health Science Center at Houston, Mayo Clinic
Co-authored papers 15
Guoqian Jiang
Mayo Clinic Rochester Minnesota USA.
Co-authored papers 13
Nansu Zong
Mayo Clinic
Co-authored papers 13
Yue Yu
Health Sciences Mayo Clinic
Co-authored papers 12
Yanshan Wang
Mayo Clinic
Co-authored papers 11
Sunghwan Sohn
Mayo Clinic
Co-authored papers 10
Feichen Shen
Shanghai Polytechnic University
Co-authored papers 9
Sungrim Moon
Mayo Clinic
Co-authored papers 7
Na Hong
Mayo Clinic
Co-authored papers 6
Steven Bedrick
Colorado College, Oregon Health & Science University, Oregon Health and Science University
Co-authored papers 4
Nilay D Shah
Mayo Clinic
Co-authored papers 4
Chen Wang
Center for Individualized Medicine, Mayo Clinic
Co-authored papers 4
William Hersh
Oregon Health & Science University
Co-authored papers 4
Kathryn J Ruddy
Mayo Clinic
Co-authored papers 3
Yadan Fan
The Second Affiliated Hospital of Hainan Medical University
Co-authored papers 3
Yiqing Zhao
Northwestern University
Co-authored papers 3
Yuan Luo
Northwestern University Feinberg School of Medicine
Co-authored papers 2
Victoria Ngo
RAND Corporation
Co-authored papers 2
Kevin J Peterson
Dartmouth College
Co-authored papers 2
Qian Shi
117902Beijing TongRen Hospital, Capital Medical University
Co-authored papers 2
Xiaoyang Ruan
University of Texas Health Science Center at Houston, Mayo Clinic
Co-authored papers 2
Walter A Rocca
Mayo Clinic
Co-authored papers 2
Jyotishman Pathak
Cornell University
Co-authored papers 2
Vinod C Kaggal
Mayo Clinic
Co-authored papers 2
Luke V Rasmussen
Northwestern University Feinberg School of Medicine
Co-authored papers 2
Prakash Adekkanattu
Northwestern University
Co-authored papers 2
Jennifer A Pacheco
University of Pennsylvania
Co-authored papers 2
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