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Author Details

Kathryn S Lilley
University of Cambridge
1989
281
71
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
38036857System-wide analysis of RNA and protein subcellular localization dynamics.Nat Methods2024
38036857System-wide analysis of RNA and protein subcellular localization dynamics.Nat Methods2024
38057663N<sup>1</sup>-methylpseudouridylation of mRNA causes +1 ribosomal frameshifting.Nature2024
38057663N<sup>1</sup>-methylpseudouridylation of mRNA causes +1 ribosomal frameshifting.Nature2024
36845540Translation of <i>in vitro</i>-transcribed RNA therapeutics.Front Mol Biosci2023
38021401A Bioconductor workflow for processing, evaluating, and interpreting expression proteomics data.F1000Res2023
37575399Enrichment of Membrane Proteins for Downstream Analysis Using Styrene Maleic Acid Lipid Particles (SMALPs) Extraction.Bio Protoc2023
37698938PLK1 inhibition dampens NLRP3 inflammasome-elicited response in inflammatory disease models.J Clin Invest2023
37554073Mechanisms and physiological function of daily haemoglobin oxidation rhythms in red blood cells.EMBO J2023
37479728Mapping diversity in African trypanosomes using high resolution spatial proteomics.Nat Commun2023
36958336Cryptosporidium uses multiple distinct secretory organelles to interact with and modify its host cell.Cell Host Microbe2023
37265400Multi-Attribute Monitoring Method for Process Development of Engineered Antibody for Site-Specific Conjugation.J Am Soc Mass Spectrom2023
36845540Translation of <i>in vitro</i>-transcribed RNA therapeutics.Front Mol Biosci2023
38021401A Bioconductor workflow for processing, evaluating, and interpreting expression proteomics data.F1000Res2023
37554073Mechanisms and physiological function of daily haemoglobin oxidation rhythms in red blood cells.EMBO J2023
37479728Mapping diversity in African trypanosomes using high resolution spatial proteomics.Nat Commun2023
37698938PLK1 inhibition dampens NLRP3 inflammasome-elicited response in inflammatory disease models.J Clin Invest2023
37575399Enrichment of Membrane Proteins for Downstream Analysis Using Styrene Maleic Acid Lipid Particles (SMALPs) Extraction.Bio Protoc2023
36958336Cryptosporidium uses multiple distinct secretory organelles to interact with and modify its host cell.Cell Host Microbe2023
37265400Multi-Attribute Monitoring Method for Process Development of Engineered Antibody for Site-Specific Conjugation.J Am Soc Mass Spectrom2023
35180429Unresolved stalled ribosome complexes restrict cell-cycle progression after genotoxic stress.Mol Cell2022
36216816Inferring differential subcellular localisation in comparative spatial proteomics using BANDLE.Nat Commun2022
35803928dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts.Nat Commun2022
35741067CFTR Rescue by Lumacaftor (VX-809) Induces an Extensive Reorganization of Mitochondria in the Cystic Fibrosis Bronchial Epithelium.Cells2022
35726249Prior Signal Acquisition Software Versions for Orbitrap Underestimate Low Isobaric Mass Tag Intensities, Without Detriment to Differential Abundance Experiments.ACS Meas Sci Au2022
35721519In Depth Exploration of the Alternative Proteome of <i>Drosophila melanogaster</i>.Front Cell Dev Biol2022
35534633Understudied proteins: opportunities and challenges for functional proteomics.Nat Methods2022
35534555An open invitation to the Understudied Proteins Initiative.Nat Biotechnol2022
36507469Semi-Supervised Non-Parametric Bayesian Modelling of Spatial Proteomics.Ann Appl Stat2022
36812516A proteomic survival predictor for COVID-19 patients in intensive care.PLOS Digit Health2022
34922010Subcellular Transcriptomics and Proteomics: A Comparative Methods Review.Mol Cell Proteomics2022
35289291Multi-omic based production strain improvement (MOBpsi) for bio-manufacturing of toxic chemicals.Metab Eng2022
35180429Unresolved stalled ribosome complexes restrict cell-cycle progression after genotoxic stress.Mol Cell2022
35015072Proteomic analysis in primary T cells reveals IL-7 alters T cell receptor thresholding via CYTIP/cytohesin/LFA-1 localisation and activation.Biochem J2022
35741067CFTR Rescue by Lumacaftor (VX-809) Induces an Extensive Reorganization of Mitochondria in the Cystic Fibrosis Bronchial Epithelium.Cells2022
35803928dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts.Nat Commun2022
35534633Understudied proteins: opportunities and challenges for functional proteomics.Nat Methods2022
35726249Prior Signal Acquisition Software Versions for Orbitrap Underestimate Low Isobaric Mass Tag Intensities, Without Detriment to Differential Abundance Experiments.ACS Meas Sci Au2022
35534555An open invitation to the Understudied Proteins Initiative.Nat Biotechnol2022
35721519In Depth Exploration of the Alternative Proteome of <i>Drosophila melanogaster</i>.Front Cell Dev Biol2022
36812516A proteomic survival predictor for COVID-19 patients in intensive care.PLOS Digit Health2022
36507469Semi-Supervised Non-Parametric Bayesian Modelling of Spatial Proteomics.Ann Appl Stat2022
36216816Inferring differential subcellular localisation in comparative spatial proteomics using BANDLE.Nat Commun2022
34922010Subcellular Transcriptomics and Proteomics: A Comparative Methods Review.Mol Cell Proteomics2022
35289291Multi-omic based production strain improvement (MOBpsi) for bio-manufacturing of toxic chemicals.Metab Eng2022
35015072Proteomic analysis in primary T cells reveals IL-7 alters T cell receptor thresholding via CYTIP/cytohesin/LFA-1 localisation and activation.Biochem J2022
34188175A Bayesian semi-parametric model for thermal proteome profiling.Commun Biol2021
33767396Ultra-fast proteomics with Scanning SWATH.Nat Biotechnol2021
34188175A Bayesian semi-parametric model for thermal proteome profiling.Commun Biol2021
33495453Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions.NPJ Genom Med2021
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Collaborators

Laurent Gatto
de Duve Institute, Universite catholique de Louvain
Co-authored papers 32
Natasha A Karp
Wellcome Sanger Institute
Co-authored papers 17
Stephen G Oliver
University of Cambridge
Co-authored papers 10
Julian L Griffin
Cambridge University
Co-authored papers 9
Markus Ralser
Charite - Universitatsmedizin Berlin
Co-authored papers 9
Manasa Ramakrishna
Co-authored papers 6
Norman W Paton
Co-authored papers 5
Chris F Taylor
European Molecular Biology Laboratory- European Bioinformatics Institute
Co-authored papers 5
Pawel Sadowski
Co-authored papers 5
Henning Hermjakob
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 5
Sabine Bahn
Co-authored papers 5
Ruedi Aebersold
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 4
Kelvin Cain
University of Cambridge
Co-authored papers 4
Georg H H Borner
Max Planck Institute of Biochemistry.
Co-authored papers 4
Susan T Weintraub
University of Texas Health Science Center at San Antonio Texas78229 USA.
Co-authored papers 4
Ernest D Laue
University of Cambridge
Co-authored papers 4
Nathan A Yates
University of Pittsburgh School of Medicine
Co-authored papers 3
Eric W Deutsch
Institute for Systems Biology
Co-authored papers 3
Sean Munro
Medical Research Council Laboratory of Molecular Biology
Co-authored papers 3
Emma Lundberg (CM4AI)
Stanford University
Co-authored papers 3
Friedrich Altmann
Co-authored papers 3
Anne-Claude Gingras
Lunenfeld-Tanenbaum Research Institute
Co-authored papers 3
Pierre-Alain Binz
Co-authored papers 3
Albert J R Heck
Utrecht University
Co-authored papers 2
Boris R Jankovic
4700 King Abdullah University of Science and Technology
Co-authored papers 2
Robert J Beynon
Co-authored papers 2
Karl Mechtler
IMP-Institute of Molecular Pathology
Co-authored papers 2
Paul Bertone
Co-authored papers 2
Georg Kustatscher
University of Edinburgh
Co-authored papers 2
Ileana M Cristea
Princeton University
Co-authored papers 2
Release 1.2