| 37071670 | Clonally Selected Lines After CRISPR-Cas Editing Are Not Isogenic. | | 2023 |
| 37674007 | Author Correction: Modeling idiopathic autism in forebrain organoids reveals an imbalance of excitatory cortical neuron subtypes during early neurogenesis. | | 2023 |
| 37645832 | Characterization of enhancer activity in early human neurodevelopment using Massively parallel reporter assay (MPRA) and forebrain organoids. | bioRxiv | 2023 |
| 37985666 | Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases. | Sci Data | 2023 |
| 37563294 | Modeling idiopathic autism in forebrain organoids reveals an imbalance of excitatory cortical neuron subtypes during early neurogenesis. | | 2023 |
| 37026484 | Efficient reconstruction of cell lineage trees for cell ancestry and cancer. | | 2023 |
| 36495113 | Somatic genomic mosaicism in the brain during aging: Scratching the surface. | | 2022 |
| 35442945 | All2: A tool for selecting mosaic mutations from comprehensive multi-cell comparisons. | PLoS Computational Biology | 2022 |
| 35809166 | Postmortem Human Dura Mater Cells Exhibit Phenotypic, Transcriptomic and Genetic Abnormalities that Impact their Use for Disease Modeling. | Stem Cell Rev Rep | 2022 |
| 36378632 | Correction: All2: A tool for selecting mosaic mutations from comprehensive multi-cell comparisons. | PLoS Computational Biology | 2022 |
| 34817058 | CNVpytor: a tool for copy number variation detection and analysis from read depth and allele imbalance in whole-genome sequencing. | Gigascience | 2021 |
| 33737484 | Early developmental asymmetries in cell lineage trees in living individuals. | Science | 2021 |
| 33737485 | Landmarks of human embryonic development inscribed in somatic mutations. | Science | 2021 |
| 32777815 | LongAGE: defining breakpoints of genomic structural variants through optimal and memory efficient alignments of long reads. | | 2021 |
| 32622340 | The role of somatic mosaicism in brain disease. | Current Opinion in Genetics and Development | 2020 |
| 32018185 | Neurological safety of oxaliplatin in patients with uncommon variants in Charcot-Marie-tooth disease genes. | J Neurol Sci | 2020 |
| 31787246 | Combining copy number, methylation markers, and mutations as a panel for endometrial cancer detection via intravaginal tampon collection. | Gynecol Oncol | 2020 |
| 32413272 | Cell Lineage Tracing and Cellular Diversity in Humans. | Annual Review of Genomics and Human Genetics | 2020 |
| 32386320 | Adult diffuse glioma GWAS by molecular subtype identifies variants in D2HGDH and FAM20C. | Neuro Oncol | 2020 |
| 33183232 | SCELLECTOR: ranking amplification bias in single cells using shallow sequencing. | BMC Bioinformatics | 2020 |
| 33122304 | Complex mosaic structural variations in human fetal brains. | Genome Res | 2020 |
| 30773596 | Chromatin organization modulates the origin of heritable structural variations in human genome. | Nucleic Acids Research | 2019 |
| 30607001 | Molecular signatures of multiple myeloma progression through single cell RNA-Seq. | Blood Cancer J | 2019 |
| 30864654 | Haplotype-resolved and integrated genome analysis of the cancer cell line HepG2. | Nucleic Acids Res | 2019 |
| 30737237 | Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562. | Genome Res | 2019 |
| 29453410 | Molecular characterization of colorectal adenomas with and without malignancy reveals distinguishing genome, transcriptome and methylome alterations. | Scientific Reports | 2018 |
| 30545853 | Transcriptome and epigenome landscape of human cortical development modeled in organoids. | Science | 2018 |
| 29717444 | Detection and Quantification of Mosaic Genomic DNA Variation in Primary Somatic Tissues Using ddPCR: Analysis of Mosaic Transposable-Element Insertions, Copy-Number Variants, and Single-Nucleotide Variants. | Methods in Molecular Biology | 2018 |
| 29217587 | Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis. | Science | 2018 |
| 29467928 | Inferring modes of evolution from colorectal cancer with residual polyp of origin. | Oncotarget | 2018 |
| 28235832 | One thousand somatic SNVs per skin fibroblast cell set baseline of mosaic mutational load with patterns that suggest proliferative origin. | Genome Res | 2017 |
| 28634656 | Patient-reported (EORTC QLQ-CIPN20) versus physician-reported (CTCAE) quantification of oxaliplatin- and paclitaxel/carboplatin-induced peripheral neuropathy in NCCTG/Alliance clinical trials. | Support Care Cancer | 2017 |
| 28450582 | Intersection of diverse neuronal genomes and neuropsychiatric disease: The Brain Somatic Mosaicism Network. | Science | 2017 |
| 28418023 | Human induced pluripotent stem cells for modelling neurodevelopmental disorders. | Nature Reviews Neurology | 2017 |
| 28662076 | Landscape and variation of novel retroduplications in 26 human populations. | PLoS Comput Biol | 2017 |
| 28438122 | Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans. | BMC Genomics | 2017 |
| 27567950 | Colorectal Cancer with Residual Polyp of Origin: A Model of Malignant Transformation. | Transl Oncol | 2016 |
| 27089393 | A uniform survey of allele-specific binding and expression over 1000-Genomes-Project individuals. | Nat Commun | 2016 |
| 27216746 | Elevated variant density around SV breakpoints in germline lineage lends support to error-prone replication hypothesis. | Genome Research | 2016 |
| 26763541 | Testing of candidate single nucleotide variants associated with paclitaxel neuropathy in the trial NCCTG N08C1 (Alliance). | Cancer Med | 2016 |
| 26657727 | Understanding genome structural variations. | Oncotarget | 2016 |
| 26710886 | Single-cell analysis of targeted transcriptome predicts drug sensitivity of single cells within human myeloma tumors. | Leukemia | 2016 |
| 26028266 | Analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms. | Nat Commun | 2015 |
| 25861968 | MetaSV: an accurate and integrative structural-variant caller for next generation sequencing. | Bioinformatics | 2015 |
| 25524895 | VarSim: a high-fidelity simulation and validation framework for high-throughput genome sequencing with cancer applications. | Bioinformatics | 2015 |
| 26186191 | FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders. | Cell | 2015 |
| 26605881 | The PsychENCODE project. | Nat Neurosci | 2015 |
| 26432246 | An integrated map of structural variation in 2,504 human genomes. | Nature | 2015 |
| 26346554 | Erratum: analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms. | Nat Commun | 2015 |
| 23311762 | Child development and structural variation in the human genome. | Child Dev | 2013 |