Author details

Full Name

Midori A Harris

Affiliation

University of Cambridge

ORCID

Career Start Year

1998

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
35100366	Fission stories: using PomBase to understand Schizosaccharomyces pombe biology.	Genetics	2022
35380656	JaponicusDB: rapid deployment of a model organism database for an emerging model species.	Genetics	2022
32353878	Community curation in PomBase: enabling fission yeast experts to provide detailed, standardized, sharable annotation from research publications.	Database (Oxford)	2020
32875947	Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.	Open Biol	2020
30321395	PomBase 2018: user-driven reimplementation of the fission yeast database provides rapid and intuitive access to diverse, interconnected information.	Nucleic Acids Res	2019
30938578	Hidden in plain sight: what remains to be discovered in the eukaryotic proteome?	Open Biol	2019
29761456	PomBase: The Scientific Resource for Fission Yeast.	Methods Mol Biol	2018
27334346	Model organism databases: essential resources that need the support of both funders and users.	BMC Biol	2016
25361970	PomBase 2015: updates to the fission yeast database.	Nucleic Acids Res	2015
24574118	Canto: an online tool for community literature curation.	Bioinformatics	2014
24885854	A method for increasing expressivity of Gene Ontology annotations using a compositional approach.	BMC Bioinformatics	2014
24941002	Representing kidney development using the gene ontology.	PLoS One	2014
23161678	Gene Ontology annotations and resources.	Nucleic Acids Res	2013
23842463	A guide to best practices for Gene Ontology (GO) manual annotation.	Database (Oxford)	2013
23895341	Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology.	BMC Genomics	2013
23658422	FYPO: the fission yeast phenotype ontology.	Bioinformatics	2013
22039153	PomBase: a comprehensive online resource for fission yeast.	Nucleic Acids Res	2012
22539675	Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology.	Bioinformatics	2012
20152934	Cross-product extensions of the Gene Ontology.	J Biomed Inform	2011
21819553	How the gene ontology evolves.	BMC Bioinformatics	2011
20139945	Ontology engineering.	Nat Biotechnol	2010
19178689	Muscle Research and Gene Ontology: New standards for improved data integration.	BMC Med Genomics	2009
18563371	Developing an ontology.	Methods Mol Biol	2008
18819077	The Gene Ontology (GO) project: structured vocabularies for molecular biology and their application to genome and expression analysis.	Curr Protoc Bioinformatics	2008
18936051	The Protein Feature Ontology: a tool for the unification of protein feature annotations.	Bioinformatics	2008
17545183	OBO-Edit--an ontology editor for biologists.	Bioinformatics	2007
14681407	The Gene Ontology (GO) database and informatics resource.	Nucleic Acids Res	2004
18629185	Standards and ontologies for functional genomics 2.	Comp Funct Genomics	2004
15153621	Annotation of parasite genomes.	Methods Mol Biol	2004
12519944	The European Bioinformatics Institute's data resources.	Nucleic Acids Res	2003
18629091	Standards and ontologies for functional genomics: towards unified ontologies for biology and biomedicine.	Comp Funct Genomics	2003
11752257	Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO).	Nucleic Acids Res	2002
18792943	The Gene Ontology (GO) project: structured vocabularies for molecular biology and their application to genome and expression analysis.	Curr Protoc Bioinformatics	2002
12073322	Saccharomyces Genome Database.	Methods Enzymol	2002
11125055	Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data.	Nucleic Acids Res	2001
10592186	Integrating functional genomic information into the Saccharomyces genome database.	Nucleic Acids Res	2000
10802651	Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.	Nat Genet	2000
9847146	Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure.	Nucleic Acids Res	1999
9851918	Comparison of the complete protein sets of worm and yeast: orthology and divergence.	Science	1998
9620858	Mcm1 regulates donor preference controlled by the recombination enhancer in Saccharomyces mating-type switching.	Genes Dev	1998
9885151	Expanding yeast knowledge online.	Yeast	1998

1 - 41 of 41

John Harry Caufield

American Heart Association, American Society for Microbiology, International Society for Computational Biology, Lawrence Berkeley National Laboratory, University of California Los Angeles, University of Delaware, Virginia Commonwealth University

Career Start Year 2012

Number of shared co-authors 4

Aravind Venkatesan

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2010

Number of shared co-authors 1

Jie Zheng

University of Pennsylvania Perelman School of Medicine

Career Start Year 2010

Number of shared co-authors 12

Simon Jupp

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2009

Number of shared co-authors 17

James Malone

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2009

Number of shared co-authors 16

Larisa N Soldatova

University of London

Career Start Year 2005

Number of shared co-authors 4

Toshiaki Katayama

Database Center for Life Science

Career Start Year 2004

Number of shared co-authors 7

Allyson L Lister

Oxford e-Research Centre, University of Oxford

Career Start Year 2004

Number of shared co-authors 11

David Osumi-Sutherland

European Bioinformatics Institute

Career Start Year 2004

Number of shared co-authors 45

Erick Antezana

Norwegian University of Science and Technology

Career Start Year 2004

Number of shared co-authors 6

Anne Niknejad

University of Lausanne

Career Start Year 2004

Number of shared co-authors 19

Steven Vercruysse

Norwegian University of Science and Technology (NTNU)

Career Start Year 2004

Number of shared co-authors 9

M??lanie Courtot

Ontario Institute for Cancer Research

Career Start Year 2001

Number of shared co-authors 25

Matthew Pocock

Newcastle University

Career Start Year 1998

Number of shared co-authors 6

Robert Stevens

The University of Manchester

Career Start Year 1998

Number of shared co-authors 13

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 10

Cecilia N Arighi

University of Delaware

Career Start Year 1998

Number of shared co-authors 54

Lynn M Schriml

University of Maryland School of Medicine, Institute for Genome Sciences

Career Start Year 1998

Number of shared co-authors 30

Katherine Wolstencroft

Leiden Institute of Advanced Computer Science, Leiden University

Career Start Year 1997

Number of shared co-authors 12

Nick Juty

University of Manchester

Career Start Year 1997

Number of shared co-authors 13

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Career Start Year 1994

Number of shared co-authors 9

Mark D Wilkinson

Universidad Politecnica de Madrid (UPM)

Career Start Year 1993

Number of shared co-authors 5

Patricia L Whetzel

University of Colorado Anschutz Medical Campus

Career Start Year 1993

Number of shared co-authors 24

Cathy H Wu

Georgetown University Medical Center

Career Start Year 1992

Number of shared co-authors 40

Phillip Lord

Newcastle University

Career Start Year 1991

Number of shared co-authors 9

Nomi L Harris

Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University

Career Start Year 1990

Number of shared co-authors 75

Lincoln Stein

Ontario Institute for Cancer Research, University Avenue

Career Start Year 1986

Number of shared co-authors 38

Martin Kuiper

Norwegian University of Science and Technology

Career Start Year 1983

Number of shared co-authors 19

Darren A Natale

Georgetown University Medical Center

Career Start Year 1982

Number of shared co-authors 40

Christian J Stoeckert

Perelman School of Medicine, University of Pennsylvania

Career Start Year 1980

Number of shared co-authors 31

row(s) 1 - 30 of 30

Valerie Wood

University of Cambridge

Co-authored papers 15

Antonia Lock

University College London

Co-authored papers 13

J Michael Cherry

Stanford University

Co-authored papers 11

Kim Rutherford

University of Cambridge

Co-authored papers 11

Selina S Dwight

Stanford University School of Medicine

Co-authored papers 10

David P Hill

Co-authored papers 10

Stephen G Oliver

University of Cambridge

Co-authored papers 9

Kara Dolinski

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Co-authored papers 9

David Botstein

Calico Life Sciences LLC

Co-authored papers 9

Catherine A Ball

Co-authored papers 8

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 8

Judith A Blake

Co-authored papers 8

Jane Lomax

Wellcome Sanger Institute

Co-authored papers 7

J??rg B??hler

University College London

Co-authored papers 7

Shuai Weng

Stanford University

Co-authored papers 7