Author details

Full Name

Rabie Saidi

Affiliation

European Bioinformatics Institute (EMBL-EBI)

ORCID

Career Start Year

2010

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
35929781	Hierarchical deep learning for predicting GO annotations by integrating protein knowledge.	Bioinformatics	2022
34181736	CROssBAR: comprehensive resource of biomedical relations with knowledge graph representations.	Nucleic Acids Res	2021
33821964	UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.	Bioinformatics	2021
32884053	Effect of sequence padding on the performance of deep learning models in archaeal protein functional prediction.	Sci Rep	2020
30517022	Efficiently Mining Recurrent Substructures from Protein Three-Dimensional Structure Graphs.	J Comput Biol	2019
31744546	The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.	Genome Biol	2019
29098713	Large-scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants.	Proteins	2018
28849566	Rule Mining Techniques to Predict Prokaryotic Metabolic Pathways.	Methods Mol Biol	2017
27153729	UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKB.	Bioinformatics	2016
26538599	Tools and data services registry: a community effort to document bioinformatics resources.	Nucleic Acids Res	2016
27390860	Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining.	PLoS One	2016
24117330	Smoothing 3D protein structure motifs through graph mining and amino acid similarities.	J Comput Biol	2014
20377887	Protein sequences classification by means of feature extraction with substitution matrices.	BMC Bioinformatics	2010

1 - 13 of 13

Kazunori D Yamada

Tohoku University

Career Start Year 2014

Number of shared co-authors 4

Wei Zheng

University of Michigan ann arbor

Career Start Year 2013

Number of shared co-authors 5

Sheng Wang

University of Texas at Arlington

Career Start Year 2008

Number of shared co-authors 0

Xin Gao

King Abdullah University of Science and Technology (KAUST)

Career Start Year 2007

Number of shared co-authors 5

Jiangning Song

Monash Data Futures Institute, Monash University

Career Start Year 2004

Number of shared co-authors 1

Mohammed J Zaki

Rensselaer Polytechnic Institute

Career Start Year 2003

Number of shared co-authors 0

George Karypis

University of Minnesota

Career Start Year 2003

Number of shared co-authors 0

L??szl?? Kaj??n

TUM (Technische Universitat Munchen)

Career Start Year 2003

Number of shared co-authors 5

Wen-Lian Hsu

Institute of Information Science

Career Start Year 2003

Number of shared co-authors 68

Dukka B Kc

Michigan Technological University

Career Start Year 2002

Number of shared co-authors 66

Ying Xu

The China-Japan Union Hospital, Jilin University

Career Start Year 2002

Number of shared co-authors 0

Lenore J Cowen

Tufts University, 177 College Avenue

Career Start Year 2001

Number of shared co-authors 0

Kevin Bryson

University of Glasgow

Career Start Year 1999

Number of shared co-authors 74

Dong Xu

University of Missouri

Career Start Year 1998

Number of shared co-authors 6

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 14

Florencio Pazos

National Centre for Biotechnology (CNB-CSIC)

Career Start Year 1997

Number of shared co-authors 4

Kentaro Tomii

National Institute of Advanced Industrial Science and Technology (AIST)

Career Start Year 1996

Number of shared co-authors 4

Hiroshi Mamitsuka

Institute for Chemical Research, Kyoto University

Career Start Year 1994

Number of shared co-authors 2

Cathy H Wu

Georgetown University Medical Center

Career Start Year 1992

Number of shared co-authors 16

Erik L L Sonnhammer

Stockholm University

Career Start Year 1992

Number of shared co-authors 8

Jaap Heringa

VU University Amsterdam

Career Start Year 1991

Number of shared co-authors 4

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Career Start Year 1991

Number of shared co-authors 7

Baldo Oliva

Universitat Pompeu Fabra

Career Start Year 1991

Number of shared co-authors 0

Peer Bork

University of Wurzburg

Career Start Year 1989

Number of shared co-authors 24

Ramanathan Sowdhamini

Indian Institute of Science

Career Start Year 1989

Number of shared co-authors 4

Adam Godzik

University of California Riverside

Career Start Year 1987

Number of shared co-authors 12

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 83

Amos Bairoch

University of Geneva

Career Start Year 1982

Number of shared co-authors 51

Chris Sander

Broad Institute of MIT and Harvard

Career Start Year 1979

Number of shared co-authors 10

Michael J E Sternberg

Imperial College London

Career Start Year 1976

Number of shared co-authors 72

row(s) 1 - 30 of 30

Maria J Martin

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 9

Tunca Do??an

Hacettepe University

Co-authored papers 5

Ahmet Sureyya Rifaioglu

Iskenderun Technical University

Co-authored papers 3

Rengul Cetin-Atalay

Middle East Technical University

Co-authored papers 3

Claire O'Donovan

European Bioinformatics Institute

Co-authored papers 3

Volkan Atalay

Middle East Technical University

Co-authored papers 3

Imane Boudellioua

King Fahd University of Petroleum and Minerals

Co-authored papers 3

Giuseppe Profiti

University of Bologna

Co-authored papers 2

Silvio C E Tosatto

University of Padova

Co-authored papers 2

Alexandre Renaux

Universite libre de Bruxelles

Co-authored papers 2

Tatyana Goldberg

TUM (Technical University of Munich) Department of Informatics

Co-authored papers 2

Diego Poggioli

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 2

V V Solov'ev

Softberry Inc.

Co-authored papers 2

Rita Casadio

Department of Pharmacy and Biotechnology, University of Bologna

Co-authored papers 2

Burkhard Rost

Technical University of Munich (TUM)

Co-authored papers 2

Robert Hoehndorf

King Abdullah University of Science and Technology

Co-authored papers 2

Steffen M??ller

Rostock University Medical Center

Co-authored papers 1

Domenico Cozzetto

Imperial College London

Co-authored papers 1

Marco Mesiti

Universita degli Studi di Milano

Co-authored papers 1

Neven Sumonja

Institute of Nuclear Sciences VINCA, University of Belgrade

Co-authored papers 1

Magdalena Kotlicka-Antczak

Medical University of Lodz

Co-authored papers 1

Alan J Medlar

Co-authored papers 1

Rui Fa

University College London

Co-authored papers 1

John S Garavelli

Co-authored papers 1

Sabeur Aridhi

Universite de Lorraine, CNRS

Co-authored papers 1

Qizhong Mao

Temple University

Co-authored papers 1

Fabio Fabris

University of Kent

Co-authored papers 1

Wei-Cheng Tseng

Taipei Veterans General Hospital

Co-authored papers 1

Christophe Dessimoz

University of Lausanne

Co-authored papers 1

Gage S Black

Brigham Young University

Co-authored papers 1

1 - 30

Author Details

Column Actions

Recommended Authors

Collaborators