Author details

Full Name

Neil R Clark

Affiliation

ORCID

Career Start Year

2011

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
29789295	Integration of protein phosphorylation, acetylation, and methylation data sets to outline lung cancer signaling networks.	Sci Signal	2018
29218867	Cell-specific prediction and application of drug-induced gene expression profiles.	Pac Symp Biocomput	2018
27667448	Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd.	Nat Commun	2016
28413689	L1000CDS<sup>2</sup>: LINCS L1000 characteristic direction signatures search engine.	NPJ Syst Biol Appl	2016
27153606	Drug-induced adverse events prediction with the LINCS L1000 data.	Bioinformatics	2016
27226058	Glucocorticoid receptor isoforms direct distinct mitochondrial programs to regulate ATP production.	Sci Rep	2016
26048415	Dynamics of the discovery process of protein-protein interactions from low content studies.	BMC Syst Biol	2015
26848405	Principal Angle Enrichment Analysis (PAEA): Dimensionally Reduced Multivariate Gene Set Enrichment Analysis Tool.	Proceedings (IEEE Int Conf Bioinformatics Biomed)	2015
24650281	The characteristic direction: a geometrical approach to identify differentially expressed genes.	BMC Bioinformatics	2014
24949636	Proteomics analysis of the non-muscle myosin heavy chain IIa-enriched actin-myosin complex reveals multiple functions within the podocyte.	PLoS One	2014
25109570	Lean Big Data integration in systems biology and systems pharmacology.	Trends Pharmacol Sci	2014
23586463	Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool.	BMC Bioinformatics	2013
23770078	Induction of a hemogenic program in mouse fibroblasts.	Cell Stem Cell	2013
23749960	Network2Canvas: network visualization on a canvas with enrichment analysis.	Bioinformatics	2013
23836026	Metasignatures identify two major subtypes of breast cancer.	CPT Pharmacometrics Syst Pharmacol	2013
23559582	Renoprotective effect of combined inhibition of angiotensin-converting enzyme and histone deacetylase.	J Am Soc Nephrol	2013
22824380	Sets2Networks: network inference from repeated observations of sets.	BMC Syst Biol	2012
22748121	Genes2FANs: connecting genes through functional association networks.	BMC Bioinformatics	2012
21917717	Introduction to statistical methods to analyze large data sets: principal components analysis.	Sci Signal	2011
21917718	Introduction to statistical methods for analyzing large data sets: gene-set enrichment analysis.	Sci Signal	2011
22219718	Recovering protein-protein and domain-domain interactions from aggregation of IP-MS proteomics of coregulator complexes.	PLoS Comput Biol	2011