Author details

Full Name

Andrew D Rouillard

Affiliation

ORCID

Career Start Year

2010

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
32368696	Systems Analysis Implicates WAVE2Â Complex in the Pathogenesis ofÂ Developmental Left-Sided ObstructiveÂ Heart Defects.	JACC Basic Transl Sci	2020
30696299	Could advances in representation learning in Artificial Intelligence provide the new paradigm for data integration in drug discovery?	Expert Opinion on Drug Discovery	2019
29782487	Systematic interrogation of diverse Omic data reveals interpretable, robust, and generalizable transcriptomic features of clinically successful therapeutic targets.	PLoS Computational Biology	2018
27903890	Pharos: Collating protein information to shed light on the druggable genome.	Nucleic Acids Res	2017
27667448	Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd.	Nat Commun	2016
28413689	L1000CDS<sup>2</sup>: LINCS L1000 characteristic direction signatures search engine.	NPJ Syst Biol Appl	2016
27141961	Enrichr: a comprehensive gene set enrichment analysis web server 2016 update.	Nucleic Acids Res	2016
27374120	The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins.	Database (Oxford)	2016
26101093	Publisherâ¿¿s Note:Abstraction for data integration:Fusing mammalian molecular, cellular and phenotype big datasets for better knowledge extraction.	Comput Biol Chem	2015
25971742	GEO2Enrichr: browser extension and server app to extract gene sets from GEO and analyze them for biological functions.	Bioinformatics	2015
26297300	Reprint of "Abstraction for data integration: Fusing mammalian molecular, cellular and phenotype big datasets for better knowledge extraction".	Comput Biol Chem	2015
24559996	Mechanical boundary conditions bias fibroblast invasion in a collagen-fibrin wound model.	Biophysical Journal	2014
24906883	LINCS Canvas Browser: interactive web app to query, browse and interrogate LINCS L1000 gene expression signatures.	Nucleic Acids Res	2014
25109570	Lean Big Data integration in systems biology and systems pharmacology.	Trends Pharmacol Sci	2014
25100688	Drug/Cell-line Browser: interactive canvas visualization of cancer drug/cell-line viability assay datasets.	Bioinformatics	2014
25009995	Coupled agent-based and finite-element models for predicting scar structure following myocardial infarction.	Progress in Biophysics and Molecular Biology	2014
22418281	Regional mechanics determine collagen fiber structure in healing myocardial infarcts.	Journal of Molecular and Cellular Cardiology	2012
22495588	Mechanical regulation of fibroblast migration and collagen remodelling in healing myocardial infarcts.	Journal of Physiology	2012
20704471	Methods for photocrosslinking alginate hydrogel scaffolds with high cell viability.	Tissue Engineering - Part C: Methods	2011
20690725	Control of the electromechanical properties of alginate hydrogels via ionic and covalent cross-linking and microparticle doping.	Biomacromolecules	2010