Author details

Full Name

Olof Emanuelsson

Affiliation

KTH Royal Institute of Technology

ORCID

Career Start Year

1999

Papers

H Index

Expertise

CM4AI Collaborator

Emma Lundberg (CM4AI)

PMID	Paper Title	Journal Title	Published Year
37398033	Zfp697 is an RNA-binding protein that regulates skeletal muscle inflammation and regeneration.	bioRxiv	2023
37398033	Zfp697 is an RNA-binding protein that regulates skeletal muscle inflammation and regeneration.	bioRxiv	2023
36076311	Cone-setting in spruce is regulated by conserved elements of the age-dependent flowering pathway.	New Phytol	2022
36076311	Cone-setting in spruce is regulated by conserved elements of the age-dependent flowering pathway.	New Phytol	2022
31570514	Detecting sequence signals in targeting peptides using deep learning.	Life Sci Alliance	2019
31570514	Detecting sequence signals in targeting peptides using deep learning.	Life Sci Alliance	2019
30483285	Integrative Analysis of Three RNA Sequencing Methods Identifies Mutually Exclusive Exons of MADS-Box Isoforms During Early Bud Development in <i>Picea abies</i>.	Front Plant Sci	2018
30483285	Integrative Analysis of Three RNA Sequencing Methods Identifies Mutually Exclusive Exons of MADS-Box Isoforms During Early Bud Development in <i>Picea abies</i>.	Front Plant Sci	2018
28175342	Genome-wide identification of physically clustered genes suggests chromatin-level co-regulation in male reproductive development in Arabidopsis thaliana.	Nucleic Acids Res	2017
28175342	Genome-wide identification of physically clustered genes suggests chromatin-level co-regulation in male reproductive development in Arabidopsis thaliana.	Nucleic Acids Res	2017
26887787	GeneiASE: Detection of condition-dependent and static allele-specific expression from RNA-seq data without haplotype information.	Sci Rep	2016
26887787	GeneiASE: Detection of condition-dependent and static allele-specific expression from RNA-seq data without haplotype information.	Sci Rep	2016
24369430	The Dictyostelium discoideum RNA-dependent RNA polymerase RrpC silences the centromeric retrotransposon DIRS-1 post-transcriptionally and is required for the spreading of RNA silencing signals.	Nucleic Acids Res	2014
24369430	The Dictyostelium discoideum RNA-dependent RNA polymerase RrpC silences the centromeric retrotransposon DIRS-1 post-transcriptionally and is required for the spreading of RNA silencing signals.	Nucleic Acids Res	2014
24632678	Sequencing degraded RNA addressed by 3' tag counting.	PLoS One	2014
25076135	Nuclease-assisted suppression of human DNA background in sepsis.	PLoS One	2014
25070246	Analysis of stranded information using an automated procedure for strand specific RNA sequencing.	BMC Genomics	2014
25070246	Analysis of stranded information using an automated procedure for strand specific RNA sequencing.	BMC Genomics	2014
25076135	Nuclease-assisted suppression of human DNA background in sepsis.	PLoS One	2014
24632678	Sequencing degraded RNA addressed by 3' tag counting.	PLoS One	2014
23341325	Hereditary uveal melanoma: a report of a germline mutation in BAP1.	Genes Chromosomes Cancer	2013
23221834	Early cone setting in Picea abies acrocona is associated with increased transcriptional activity of a MADS box transcription factor.	Plant Physiol	2013
23341325	Hereditary uveal melanoma: a report of a germline mutation in BAP1.	Genes Chromosomes Cancer	2013
23221834	Early cone setting in Picea abies acrocona is associated with increased transcriptional activity of a MADS box transcription factor.	Plant Physiol	2013
20360838	In-depth transcriptome analysis reveals novel TARs and prevalent antisense transcription in human cell lines.	PLoS One	2010
21126332	Analysis of transcript and protein overlap in a human osteosarcoma cell line.	BMC Genomics	2010
20360838	In-depth transcriptome analysis reveals novel TARs and prevalent antisense transcription in human cell lines.	PLoS One	2010
21126332	Analysis of transcript and protein overlap in a human osteosarcoma cell line.	BMC Genomics	2010
18431481	Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.	PLoS One	2008
18431481	Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.	PLoS One	2008
17119069	Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome.	Genome Res	2007
17568005	Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies.	Genome Res	2007
17567988	What is a gene, post-ENCODE? History and updated definition.	Genome Res	2007
17446895	Locating proteins in the cell using TargetP, SignalP and related tools.	Nat Protoc	2007
17571346	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.	Nature	2007
17119069	Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome.	Genome Res	2007
17571346	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.	Nature	2007
17568005	Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies.	Genome Res	2007
17567988	What is a gene, post-ENCODE? History and updated definition.	Genome Res	2007
17446895	Locating proteins in the cell using TargetP, SignalP and related tools.	Nat Protoc	2007
16365382	Design optimization methods for genomic DNA tiling arrays.	Genome Res	2006
16365382	Design optimization methods for genomic DNA tiling arrays.	Genome Res	2006
16939796	Extrapolating traditional DNA microarray statistics to tiling and protein microarray technologies.	Methods Enzymol	2006
16939796	Extrapolating traditional DNA microarray statistics to tiling and protein microarray technologies.	Methods Enzymol	2006
15208420	Analysis of curated and predicted plastid subproteomes of Arabidopsis. Subcellular compartmentalization leads to distinctive proteome properties.	Plant Physiol	2004
15591350	DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states.	Proc Natl Acad Sci U S A	2004
15208420	Analysis of curated and predicted plastid subproteomes of Arabidopsis. Subcellular compartmentalization leads to distinctive proteome properties.	Plant Physiol	2004
15591350	DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states.	Proc Natl Acad Sci U S A	2004
12823981	In silico prediction of the peroxisomal proteome in fungi, plants and animals.	J Mol Biol	2003
14500894	LumenP--a neural network predictor for protein localization in the thylakoid lumen.	Protein Sci	2003

1 - 50 of 64

Tatyana Goldberg

TUM (Technical University of Munich) Department of Informatics

Career Start Year 2012

Number of shared co-authors 4

David Anderson de Lima Morais

Universite de Sherbrooke

Career Start Year 2010

Number of shared co-authors 5

Kenichiro Imai

Cellular and Molecular Biotechnology Research Institute

Career Start Year 2005

Number of shared co-authors 1

Vera van Noort

Leiden University, Institute of Biology Leiden

Career Start Year 2003

Number of shared co-authors 0

Christine Vogel

Center for Genomics and Systems Biology, New York University

Career Start Year 2003

Number of shared co-authors 1

Ying Xu

The China-Japan Union Hospital, Jilin University

Career Start Year 2002

Number of shared co-authors 1

Aalt D J van Dijk

Wageningen University and Research

Career Start Year 2001

Number of shared co-authors 2

Rajkumar Sasidharan

University of California los angeles

Career Start Year 2000

Number of shared co-authors 9

Gunnar R??tsch

ETH Zurich

Career Start Year 1999

Number of shared co-authors 12

V??ctor Quesada

Instituto Universitario de Oncologia, Universidad de Oviedo

Career Start Year 1998

Number of shared co-authors 19

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 7

Dong Xu

University of Missouri

Career Start Year 1998

Number of shared co-authors 0

Thomas Girke

Institute for Integrative Genome Biology, University of California Riverside

Career Start Year 1998

Number of shared co-authors 3

Asa Ben-Hur

Colorado State University

Career Start Year 1996

Number of shared co-authors 2

Dirk Walther

Max Planck Institute of Molecular Plant Physiology

Career Start Year 1995

Number of shared co-authors 0

Ralf Zimmer

Ludwig-Maximilians-Universitat Munchen

Career Start Year 1995

Number of shared co-authors 2

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Career Start Year 1994

Number of shared co-authors 17

Ioannis Xenarios

University of Lausanne

Career Start Year 1994

Number of shared co-authors 7

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 3

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 1

Timothy R Hughes

University of Toronto

Career Start Year 1992

Number of shared co-authors 15

Marc R Wilkins

University of New South Wales

Career Start Year 1992

Number of shared co-authors 3

Erik L L Sonnhammer

Stockholm University

Career Start Year 1992

Number of shared co-authors 5

Burkhard Rost

Technical University of Munich (TUM)

Career Start Year 1992

Number of shared co-authors 11

Martijn A Huynen

Radboud University Medical Centre Nijmegen

Career Start Year 1992

Number of shared co-authors 4

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Career Start Year 1991

Number of shared co-authors 3

Javier De Las Rivas

Cancer Research Centre (IBMCC/CSIC/USAL/IBSAL)

Career Start Year 1989

Number of shared co-authors 2

Michal Linial

Institute of Life Sciences, The Hebrew University of Jerusalem

Career Start Year 1986

Number of shared co-authors 3

Brian J Haas

Broad Institute of MIT and Harvard

Career Start Year 1981

Number of shared co-authors 14

David T Jones

University College London

Career Start Year 1977

Number of shared co-authors 7

row(s) 1 - 30 of 30

Gunnar von Heijne

Stockholm University

Co-authored papers 9

Mark Gerstein

Yale University

Co-authored papers 7

Michael Snyder

Stanford University

Co-authored papers 7

Joakim Lundeberg

KTH Royal Institute of Technology

Co-authored papers 6

Joel Rozowsky

Co-authored papers 6

Sherman M Weissman

Co-authored papers 5

Zhengdong D Zhang

Co-authored papers 3

Deyou Zheng

Co-authored papers 3

S??ren Brunak

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Co-authored papers 2

Alexander E Urban

Co-authored papers 2

Wah Heng Lee

Co-authored papers 2

Stephen Hartman

Co-authored papers 2

Jan O Korbel

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 2

Ghia Euskirchen

Co-authored papers 2

Viktor Stolc

NASA Ames Research Center

Co-authored papers 2

Daniel Klevebring

Karolinska Institutet

Co-authored papers 2

Ugrappa Nagalakshmi

Co-authored papers 2

Zheng Lian

Co-authored papers 2

Yijun Ruan

Co-authored papers 2

Chia-Lin Wei

Co-authored papers 2

Mathias Uhl??n

KTH Royal Institute of Technology

Co-authored papers 1

Paul Bertone

Co-authored papers 1

Pawandeep Dhami

Co-authored papers 1

Atif Shahab

Co-authored papers 1

Yong Yu

Co-authored papers 1

Kayla E Smith

Co-authored papers 1

Daryl J Thomas

University of California at Santa Cruz

Co-authored papers 1

Madhavan Ganesh

Co-authored papers 1

Max K??ller

KTH Royal Institute of Technology

Co-authored papers 1

Ross C Hardison

Co-authored papers 1

1 - 30

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