Author details

Full Name

Randi Vita

Affiliation

Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology

ORCID

Career Start Year

1995

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36250634	The Cancer Epitope Database and Analysis Resource (CEDAR).	Nucleic Acids Res	2023
37258911	IEDB and CEDAR: Two Sibling Databases to Serve the Global Scientific Community.	Methods Mol Biol	2023
36763096	Coronavirus Immunotherapeutic Consortium Database.	Database (Oxford)	2023
35042788	Minimal Information about MHC Multimers (MIAMM).	J Immunol	2022
36521443	SARS-CoV-2 human TÂ cell epitopes: Adaptive immune response against COVID-19.	Cell Host Microbe	2022
36347894	Aï»¿ curated collection of human vaccination response signatures.	Sci Data	2022
34237248	SARS-CoV-2 human T cell epitopes: Adaptive immune response against COVID-19.	Cell Host Microbe	2021
33777034	TCRMatch: Predicting T-Cell Receptor Specificity Based on Sequence Similarity to Previously Characterized Receptors.	Front Immunol	2021
33772585	An immunologically friendly classification of non-peptidic ligands.	Database (Oxford)	2021
34697637	OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.	Database (Oxford)	2021
34244718	Standardization of assay representation in the Ontology for Biomedical Investigations.	Database (Oxford)	2021
32283555	A structured model for immune exposures.	Database (Oxford)	2020
32615639	A behind-the-scenes tour of the IEDB curation process: an optimized process empirically integrating automation and human curation efforts.	Immunology	2020
30357391	The Immune Epitope Database (IEDB): 2018 update.	Nucleic Acids Res	2019
31272390	Reporting and connecting cell type names and gating definitions through ontologies.	BMC Bioinformatics	2019
29688354	FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability.	Database (Oxford)	2018
29878047	ImmunomeBrowser: a tool to aggregate and visualize complex and heterogeneous epitopes in reference proteins.	Bioinformatics	2018
30515166	Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database.	Front Immunol	2018
29688357	Identification of errors in the IEDB using ontologies.	Database (Oxford)	2018
28634590	The Immune Epitope Database: How Data Are Entered and Retrieved.	J Immunol Res	2017
28365732	Better living through ontologies at the Immune Epitope Database.	Database (Oxford)	2017
26759709	An ontology for major histocompatibility restriction.	J Biomed Semantics	2016
26678806	Reproducibility and conflicts in immune epitope data.	Immunology	2016
27979027	Immunodominance in allergic T-cell reactivity to Japanese cedar in different geographic cohorts.	Ann Allergy Asthma Immunol	2016
27359111	Sequence conservation predicts T cell reactivity against ragweed allergens.	Clin Exp Allergy	2016
27128319	The Ontology for Biomedical Investigations.	PLoS One	2016
25300482	The immune epitope database (IEDB) 3.0.	Nucleic Acids Res	2015
25548174	Immunological consequences of intragenus conservation of Mycobacterium tuberculosis T-cell epitopes.	Proc Natl Acad Sci U S A	2015
25110827	Antibody informatics for drug discovery.	Biochim Biophys Acta	2014
23734660	Query enhancement through the practical application of ontology: the IEDB and OBI.	J Biomed Semantics	2013
22786768	T cell responses to known allergen proteins are differently polarized and account for a variable fraction of total response to allergen extracts.	J Immunol	2012
19906713	The immune epitope database 2.0.	Nucleic Acids Res	2010
21403821	Towards defining molecular determinants recognized by adaptive immunity in allergic disease: an inventory of the available data.	J Allergy (Cairo)	2010
19918065	Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population.	Proc Natl Acad Sci U S A	2009
18688821	The curation guidelines of the immune epitope database and analysis resource.	Cytometry A	2008
16836764	Curation of complex, context-dependent immunological data.	BMC Bioinformatics	2006
17069454	The biocurator: connecting and enhancing scientific data.	PLoS Comput Biol	2006
15749850	Clustering of T cell ligands on artificial APC membranes influences T cell activation and protein kinase C theta translocation to the T cell plasma membrane.	J Immunol	2005
14988727	SPAK kinase is a substrate and target of PKCtheta in T-cell receptor-induced AP-1 activation pathway.	EMBO J	2004
11699076	IGF-I/BP-3 administration preserves hepatic homeostasis after thermal injury which is associated with increases in no and hepatic NF-kappa B.	Shock	2001
11352826	Cell proliferation, apoptosis, NF-kappaB expression, enzyme, protein, and weight changes in livers of burned rats.	Am J Physiol Gastrointest Liver Physiol	2001
11591790	The functional role of rho and rho-associated coiled-coil forming protein kinase in eotaxin signaling of eosinophils.	J Immunol	2001
9502767	Interleukin 15 is produced by endothelial cells and increases the transendothelial migration of T cells In vitro and in the SCID mouse-human rheumatoid arthritis model In vivo.	J Clin Invest	1998
7534786	Phenotypic characterization of CD4+ T cells that exhibit a transendothelial migratory capacity.	J Immunol	1995
11854787	Prostaglandin E(2)-Mediated Inhibition of the Transendothelial Migration of Human T Lymphocytes.	Am J Ther	1995

1 - 45 of 45

Edison Ong

University of Michigan Medical School ann arbor

Career Start Year 2014

Number of shared co-authors 13

Ang Cui

Massachusetts Institute of Technology

Career Start Year 2013

Number of shared co-authors 0

Alexander F Rosenberg

University of Alabama at Birmingham Birmingham

Career Start Year 2011

Number of shared co-authors 0

Zuoshuang Xiang

College of Literature, University of Michigan ann arbor

Career Start Year 2006

Number of shared co-authors 16

Christopher Szeto

La Trobe Institute for Molecular Science, La Trobe University

Career Start Year 2005

Number of shared co-authors 0

Johannes B Goll

.The Emmes Corporation

Career Start Year 2005

Number of shared co-authors 2

Alison Deckhut Augustine

National Institute of Allergy and Infectious Diseases/National Institutes of Health

Career Start Year 2005

Number of shared co-authors 6

Sudipto Saha

Bose Institute

Career Start Year 2005

Number of shared co-authors 0

David S DeLuca

Hannover Medical School

Career Start Year 2004

Number of shared co-authors 7

Sunil Thomas

Lankenau Institute for Medical Research

Career Start Year 2004

Number of shared co-authors 1

Andrew T Girvin

Career Start Year 2003

Number of shared co-authors 1

David J Lynn

South Australian Health and Medical Research Institute

Career Start Year 2002

Number of shared co-authors 3

Julie A McMurry

University of Colorado - Anschutz Medical Campus

Career Start Year 2002

Number of shared co-authors 23

William D Martin

EpiVax Inc.

Career Start Year 2001

Number of shared co-authors 1

Ning Jiang

The University of Texas at Austin

Career Start Year 2000

Number of shared co-authors 0

Vivian H Gersuk

Center for Systems Immunology, Benaroya Research Institute

Career Start Year 1993

Number of shared co-authors 1

Anna Maria Masci

Duke University School of Medicine

Career Start Year 1992

Number of shared co-authors 13

Leonard Moise

EpiVax Inc.

Career Start Year 1991

Number of shared co-authors 1

William H Hildebrand

University of Oklahoma Health Sciences Center

Career Start Year 1990

Number of shared co-authors 7

Anne S De Groot

University of Georgia

Career Start Year 1989

Number of shared co-authors 2

Anthony W Purcell

Monash Biomedicine Discovery Institute, Monash University

Career Start Year 1989

Number of shared co-authors 4

Nir Hacohen

Broad Institute of MIT and Harvard

Career Start Year 1989

Number of shared co-authors 1

Philippe Moingeon

France French Academy of Pharmacy

Career Start Year 1983

Number of shared co-authors 1

Martin S Zand

University of Rochester Medical Center

Career Start Year 1983

Number of shared co-authors 7

David R Karp

University of Texas Southwestern Medical Center

Career Start Year 1981

Number of shared co-authors 7

Thomas E Fehniger

Biomedical Center, Lund University

Career Start Year 1979

Number of shared co-authors 0

Carl A K Borrebaeck

Lund University

Career Start Year 1977

Number of shared co-authors 1

Christopher B Wilson

Drukier Institute for Children's Health

Career Start Year 1976

Number of shared co-authors 4

Jonathan Braun

Inflammatory Bowel and Immunobiology Research Institute, Cedars-Sinai Medical Center

Career Start Year 1975

Number of shared co-authors 4

Shoba Ranganathan

Macquarie University

Career Start Year 1972

Number of shared co-authors 8

row(s) 1 - 30 of 30

Bjoern Peters

University of Washington School of Medicine

Co-authored papers 35

Alessandro Sette

Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology

Co-authored papers 28

James A Overton

Knocean Inc.

Co-authored papers 15

Jason A Greenbaum

Co-authored papers 12

John Sidney

Co-authored papers 8

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Co-authored papers 3

Jie Zheng

University of Pennsylvania Perelman School of Medicine

Co-authored papers 3

Christian J Stoeckert

Perelman School of Medicine, University of Pennsylvania

Co-authored papers 3

Melissa A Haendel

Co-authored papers 3

Richard H Scheuermann

J. Craig Venter Institute

Co-authored papers 3

Yohan Kim

Co-authored papers 2

Damion Dooley

Simon Fraser University

Co-authored papers 2

Kei-Hoi Cheung

Yale University School of Medicine

Co-authored papers 2

Yongqun He

University of Michigan Medical School ann arbor

Co-authored papers 2

Patrick Dunn

NG Health Solutions

Co-authored papers 2

Marcus C Chibucos

Institute for Genome Sciences, University of Maryland School of Medicine

Co-authored papers 2

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 2

M??lanie Courtot

Ontario Institute for Cancer Research

Co-authored papers 2

Alan Ruttenberg

University at Buffalo

Co-authored papers 2

Anita Bandrowski

university of california san diego

Co-authored papers 2

Matthew H Brush

University of Colorado Anschutz Medical Campus