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Author Details

Haixuan Yang
University of Galway
2009
15
7
PMIDPaper TitleJournal TitlePublished Year
33064647Synergy Between Embedding and Protein Functional Association Networks for Drug Label Prediction Using Harmonic Function.IEEE/ACM Trans Comput Biol Bioinform2022
36274527Boundary heat diffusion classifier for a semi-supervised learning in a multilayer network embedding.Neural Netw2022
32617614Selection Shapes Synonymous Stop Codon Use in Mammals.J Mol Evol2020
31320740Discovering Links Between Side Effects and Drugs Using a Diffusion Based Method.Sci Rep2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
31500564Predicting links between tumor samples and genes using 2-Layered graph based diffusion approach.BMC Bioinformatics2019
27604469An expanded evaluation of protein function prediction methods shows an improvement in accuracy.Genome Biol2016
27741311Impact of the Choice of Normalization Method on Molecular Cancer Class Discovery Using Nonnegative Matrix Factorization.PLoS One2016
24659104GOssTo: a stand-alone application and a web tool for calculating semantic similarities on the Gene Ontology.Bioinformatics2014
25142519Progressive promoter element combinations classify conserved orthogonal plant circadian gene expression modules.J R Soc Interface2014
23353650A large-scale evaluation of computational protein function prediction.Nat Methods2013
22522134Improving GO semantic similarity measures by exploring the ontology beneath the terms and modelling uncertainty.Bioinformatics2012
22939629A census of human soluble protein complexes.Cell2012
22879875Computational selection of transcriptomics experiments improves Guilt-by-Association analyses.PLoS One2012
19095552A volume-based heat-diffusion classifier.IEEE Trans Syst Man Cybern B Cybern2009
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Collaborators

Alberto Paccanaro
University of London
Co-authored papers 8
Prajwal Bhat
Royal Holloway University of London
Co-authored papers 4
Alfonso E Romero
University of Miami
Co-authored papers 4
Marco Mesiti
Universita degli Studi di Milano
Co-authored papers 3
Tapio Salakoski
University of Turku
Co-authored papers 3
Liisa Holm
Institute of Biotechnology, University of Helsinki
Co-authored papers 3
Slobodan Vucetic
Temple University
Co-authored papers 3
Mark N Wass
University of Kent
Co-authored papers 3
Julian Gough
Medical Research Council Laboratory of Molecular Biology
Co-authored papers 3
Christine Orengo
University College London, Institute of Structural and Molecular Biology
Co-authored papers 3
Tam??s Nepusz
Kingston University
Co-authored papers 3
Jianlin Cheng
University of Missouri
Co-authored papers 3
Marco Falda
University of Padova
Co-authored papers 3
Enrico Lavezzo
University of Padova
Co-authored papers 3
Paolo Fontana
San Pio Hospital
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Predrag Radivojac
Indiana University
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Fran Supek
Catalan Institution for Research and Advanced Studies (ICREA)
Co-authored papers 3
Sean D Mooney
University of Washington
Co-authored papers 3
Hai Fang
University of Bristol
Co-authored papers 3
Stefano Toppo
University of Padova
Co-authored papers 3
Patricia C Babbitt
University of California san francisco
Co-authored papers 3
Asa Ben-Hur
Colorado State University
Co-authored papers 3
Michal Linial
Institute of Life Sciences, The Hebrew University of Jerusalem
Co-authored papers 3
Daisuke Kihara
Purdue University
Co-authored papers 3
Iddo Friedberg
Iowa State University
Co-authored papers 3
David T Jones
University College London
Co-authored papers 3
Steven E Brenner
University of California berkeley
Co-authored papers 3
Rita Casadio
Department of Pharmacy and Biotechnology, University of Bologna
Co-authored papers 3
Burkhard Rost
Technical University of Munich (TUM)
Co-authored papers 3
Domenico Cozzetto
Imperial College London
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