Author details

Full Name

Steven W Singer

Affiliation

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36465038	Revealing oxidative pentose metabolism in new Pseudomonas putida isolates.	Environ Microbiol	2023
37724856	Simultaneous carbon catabolite repression governs sugar and aromatic co-utilization in <i>Pseudomonas putida</i> M2.	Appl Environ Microbiol	2023
36894634	Lignin deconstruction by anaerobic fungi.	Nat Microbiol	2023
36691869	Development of genetic tools for heterologous protein expression in a pentose-utilizing environmental isolate of Pseudomonas putida.	Microb Biotechnol	2023
35134957	Adaptive evolution of Methylotuvimicrobium alcaliphilum to grow in the presence of rhamnolipids improves fatty acid and rhamnolipid production from CH4.	J Ind Microbiol Biotechnol	2022
36280858	Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction.	Microbiome	2022
35377177	Complete Genome Sequences of Five Isolated Pseudomonas Strains that Catabolize Pentose Sugars and Aromatic Compounds Obtained from Lignocellulosic Biomass.	Microbiol Resour Announc	2022
36454757	Trajectories for the evolution of bacterial CO<sub>2</sub>-concentrating mechanisms.	Proc Natl Acad Sci U S A	2022
34384463	CAZymes from the thermophilic fungus Thermoascus aurantiacus are induced by C5 and C6 sugars.	Biotechnology for Biofuels	2021
34172951	Microbial production of advanced biofuels.	Nat Rev Microbiol	2021
34168079	The F-box protein gene <i>exo</i>-<i>1</i> is a target for reverse engineering enzyme hypersecretion in filamentous fungi.	Proc Natl Acad Sci U S A	2021
34009716	Development of dual-inducible duet-expression vectors for tunable gene expression control and CRISPR interference-based gene repression in Pseudomonas putida KT2440.	Microb Biotechnol	2021
33961733	Recovering Individual Genomes from Metagenomes Using MaxBin 2.0.	Current Protocols	2021
33518389	Metabolic Engineering of Cupriavidus necator H16 for Sustainable Biofuels from CO.	Trends in Biotechnology	2021
33926536	Experimental and theoretical insights into the effects of pH on catalysis of bond-cleavage by the lignin peroxidase isozyme H8 from Phanerochaete chrysosporium.	Biotechnol Biofuels	2021
33870123	A single-cell genomics pipeline for environmental microbial eukaryotes.	iScience	2021
34083602	A multiplexed nanostructure-initiator mass spectrometry (NIMS) assay for simultaneously detecting glycosyl hydrolase and lignin modifying enzyme activities.	Sci Rep	2021
33221420	Machine learning for metabolic engineering: A review.	Metab Eng	2021
34675441	A new path for one-carbon conversion.	Nature Metabolism	2021
32557119	Purification and characterization of a native lytic polysaccharide monooxygenase from Thermoascus aurantiacus.	Biotechnology Letters	2020
32185613	Ionic Liquid Tolerance of Yeasts in Family Dipodascaceae and Genus Wickerhamomyces.	Appl Biochem Biotechnol	2020
32160408	Response of Pseudomonas putida to Complex, Aromatic-Rich Fractions from Biomass.	ChemSusChem	2020
31754206	Function-driven single-cell genomics uncovers cellulose-degrading bacteria from the rare biosphere.	ISME J	2020
33239462	Whole-Genome Sequence of Brevibacillus borstelensis SDM, Isolated from a Sorghum-Adapted Microbial Community.	Microbiol Resour Announc	2020
32963959	Adaptive laboratory evolution of <i>Pseudomonas putida</i> KT2440 improves <i>p</i>-coumaric and ferulic acid catabolism and tolerance.	Metab Eng Commun	2020
33062053	Development of genetic tools for the thermophilic filamentous fungus .	Biotechnology for Biofuels	2020
32504628	Construction of a novel dual-inducible duet-expression system for gene (over)expression in Pseudomonas putida.	Plasmid	2020
30988034	Guanidine Riboswitch-Regulated Efflux Transporters Protect Bacteria against Ionic Liquid Toxicity.	J Bacteriol	2019
30982958	Methyl ketone production by Pseudomonas putida is enhanced by plant-derived amino acids.	Biotechnol Bioeng	2019
30808697	Large Circular Plasmids from Groundwater Plasmidomes Span Multiple Incompatibility Groups and Are Enriched in Multimetal Resistance Genes.	mBio	2019
31388393	Isolation and Characterization of Bacterial Cellulase Producers for Biomass Deconstruction: A Microbiology Laboratory Course.	J Microbiol Biol Educ	2019
29315638	Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists.	New Phytologist	2018
30190458	Jungle Express is a versatile repressor system for tight transcriptional control.	Nat Commun	2018
30045857	Natural Variation in the Multidrug Efflux Pump <i>SGE1</i> Underlies Ionic Liquid Tolerance in Yeast.	Genetics	2018
30375402	Author Correction: Jungle Express is a versatile repressor system for tight transcriptional control.	Nat Commun	2018
30042744	Microbial Community Structure and Functional Potential Along a Hypersaline Gradient.	Front Microbiol	2018
29109478	A bacterial pioneer produces cellulase complexes that persist through community succession.	Nat Microbiol	2018
29145855	Generation of a platform strain for ionic liquid tolerance using adaptive laboratory evolution.	Microb Cell Fact	2017
28648267	Ecological Insights into the Dynamics of Plant Biomass-Degrading Microbial Consortia.	Trends Microbiol	2017
28967888	Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.	Nat Methods	2017
28609753	Alteration of white-rot basidiomycetes cellulase and xylanase activities in the submerged co-cultivation and optimization of enzyme production by Irpex lacteus and Schizophyllum commune.	Bioresource Technology	2017
29051987	1-Ethyl-3-methylimidazolium tolerance and intracellular lipid accumulation of 38 oleaginous yeast species.	Appl Microbiol Biotechnol	2017
29167701	Xylose induces cellulase production in <i>Thermoascus aurantiacus</i>.	Biotechnol Biofuels	2017
29075325	<i>Rhodosporidium toruloides:</i> a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts.	Biotechnol Biofuels	2017
29281693	Expression of naturally ionic liquid-tolerant thermophilic cellulases in Aspergillus niger.	PLoS One	2017
27664055	Transcriptomic analysis of the highly efficient oil-degrading bacterium Acinetobacter venetianus RAG-1 reveals genes important in dodecane uptake and utilization.	FEMS Microbiol Lett	2016
26973616	Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage.	Front Microbiol	2016
27102129	Enrichment of microbial communities tolerant to the ionic liquids tetrabutylphosphonium chloride and tributylethylphosphonium diethylphosphate.	Appl Microbiol Biotechnol	2016
26515820	MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets.	Bioinformatics	2016
26325358	Refining the phylum Chlorobi by resolving the phylogeny and metabolic potential of the representative of a deeply branching, uncultivated lineage.	ISME J	2016