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Author Details

John S Taylor
University of Victoria
1999
41
25
PMIDPaper TitleJournal TitlePublished Year
37097026Sablefish (Anoplopoma fimbria) chromosome-level genome assembly.G3 (Bethesda)2023
34294428Retention of duplicated genes in evolution.Trends Genet2022
33372686The subterranean catfish <i>Phreatobius cisternarum</i> provides insights into visual adaptations to the phreatic environment.Int J Dev Biol2021
29555918Parallel opsin switches in multiple cone types of the starry flounder retina: tuning visual pigment composition for a demersal life style.Sci Rep2018
29059507The non-visual opsins: eighteen in the ancestor of vertebrates, astonishing increase in ray-finned fish, and loss in amniotes.J Exp Zool B Mol Dev Evol2017
28295290Fine-tuning light sensitivity in the starry flounder (Platichthys stellatus) retina: Regional variation in photoreceptor cell morphology and opsin gene expression.J Comp Neurol2017
28399148Convergent evolution of SWS2 opsin facilitates adaptive radiation of threespine stickleback into different light environments.PLoS Biol2017
26950095The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.Nat Genet2016
27230688Corrigendum: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.Nat Genet2016
27463216Opsin gene repertoires in northern archaic hominids.Genome2016
26283341Conservation of the Host-Interacting Proteins Tp0750 and Pallilysin among Treponemes and Restriction of Proteolytic Capacity to Treponema pallidum.Infect Immun2015
24952670Did Neanderthals and Denisovans have our de novo genes?J Mol Evol2014
21775314In the four-eyed fish (Anableps anableps), the regions of the retina exposed to aquatic and aerial light do not express the same set of opsin genes.Biol Lett2012
22897796The polyphenol oxidase gene family in land plants: Lineage-specific duplication and expansion.BMC Genomics2012
22178363Opsin gene duplication and divergence in ray-finned fish.Mol Phylogenet Evol2012
21123836The antiquity of chordate odorant receptors is revealed by the discovery of orthologs in the cnidarian Nematostella vectensis.Genome Biol Evol2011
21900472Intra-retinal variation of opsin gene expression in the guppy (Poecilia reticulata).J Exp Biol2011
21447186RT-qPCR reveals opsin gene upregulation associated with age and sex in guppies (Poecilia reticulata) - a species with color-based sexual selection and 11 visual-opsin genes.BMC Evol Biol2011
19551143A fish eye out of water: ten visual opsins in the four-eyed fish, Anableps anableps.PLoS One2009
19804645Amphioxus (Branchiostoma floridae) has orthologs of vertebrate odorant receptors.BMC Evol Biol2009
18638376The molecular basis of color vision in colorful fish: four long wave-sensitive (LWS) opsins in guppies (Poecilia reticulata) are defined by amino acid substitutions at key functional sites.BMC Evol Biol2008
16965768A genomic view of the sea urchin nervous system.Dev Biol2006
17095691The genome of the sea urchin Strongylocentrotus purpuratus.Science2006
17236426Parallel evolution and vicariance in the guppy (Poecilia reticulata) over multiple spatial and temporal scales.Evolution2006
12949137Identification of Nogo-66 receptor (NgR) and homologous genes in fish.Mol Biol Evol2004
15568988Duplication and divergence: the evolution of new genes and old ideas.Annu Rev Genet2004
15486693Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish.J Mol Evol2004
14757817Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates.Proc Natl Acad Sci U S A2004
15114419Salmonid opsin sequences undergo positive selection and indicate an alternate evolutionary relationship in oncorhynchus.J Mol Evol2004
12836686Are all fishes ancient polyploids?J Struct Funct Genomics2003
12618368Genome duplication, a trait shared by 22000 species of ray-finned fish.Genome Res2003
11752268Wanda: a database of duplicated fish genes.Nucleic Acids Res2002
12354655Dealing with saturation at the amino acid level: a case study based on anciently duplicated zebrafish genes.Gene2002
115258162R or not 2R?Trends Genet2001
11377777Genome duplication, divergent resolution and speciation.Trends Genet2001
11675603The ghost of selection past: rates of evolution and functional divergence of anciently duplicated genes.J Mol Evol2001
11747834Revisiting recent challenges to the ancient fish-specific genome duplication hypothesis.Curr Biol2001
11604130Comparative genomics provides evidence for an ancient genome duplication event in fish.Philos Trans R Soc Lond B Biol Sci2001
10880490Slipped-strand mispairing at noncontiguous repeats in Poecilia reticulata: a model for minisatellite birth.Genetics2000
9929393Microsatellite allele size homoplasy in the guppy (Poecilia reticulata)J Mol Evol1999
10331282The death of a microsatellite: a phylogenetic perspective on microsatellite interruptions.Mol Biol Evol1999
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Collaborators

Allison M Churcher
Umea University
Co-authored papers 5
Glen Humphrey
National Institute of Child Health and Human Development
Co-authored papers 2
Robert D Burke
University of Victoria
Co-authored papers 2
Bruce P Brandhorst
University Drive Simon Fraser University
Co-authored papers 2
Cavit Agca
Sabanci University
Co-authored papers 2
Xiuqian Mu
University at Buffalo, State University of New York
Co-authored papers 2
Nansheng Chen
Institute of Oceanology, Chinese Academy of Sciences (IOCAS)
Co-authored papers 2
Kerstin Lindblad-Toh
Uppsala University
Co-authored papers 2
Daniel Barrell
Oncology R&D
Co-authored papers 2
Peter F Stadler
Co-authored papers 2
Greg Murray
Centre for Mental Health Swinburne University of Technology
Co-authored papers 2
Shunsuke Yaguchi
Shimoda Marine Research Center, University of Tsukuba
Co-authored papers 2
John H Postlethwait
Co-authored papers 2
Dan O Mellott
University of Victoria
Co-authored papers 2
Jessica Alföldi
Co-authored papers 2
Lynne M Angerer
National Institute of Dental and Craniofacial Research, National Institutes of Health
Co-authored papers 2
Diana Wang
University of Victoria
Co-authored papers 2
Karen Wilson
University of Gothenburg
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Jeremy Johnson
Co-authored papers 2
Maurice R Elphick
Queen Mary University of London
Co-authored papers 2
Michael C Thorndyke
Department of Biology and Environmental Science University of Gothenburg
Co-authored papers 2
Matthew L Rowe
Western Regional Research Center
Co-authored papers 2
Stephen M J Searle
Wellcome Trust Sanger Institute
Co-authored papers 2
Takae Kiyama
University of Texas Health Science Center at Houston Medical School
Co-authored papers 2
William H Klein
Columbia University
Co-authored papers 2
Jana Hertel
Co-authored papers 2
Shuguang Liang
The University of Texas M. D. Anderson Cancer Center
Co-authored papers 2
Finn Hallb????k
Uppsala University
Co-authored papers 2
Mark Yandell
University of Utah
Co-authored papers 2
Robert P Olinski
Uppsala University
Co-authored papers 2
Release 1.2