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Author Details

Markus Hafner
National Institute of Arthritis and Musculoskeletal and Skin Diseases
2006
93
53
PMIDPaper TitleJournal TitlePublished Year
34001528Evolving Views of Long Noncoding RNAs and Epigenomic Control of Lymphocyte State and Memory.Cold Spring Harb Perspect Biol2022
35409289MicroRNA 3928 Suppresses Glioblastoma through Downregulation of Several Oncogenes and Upregulation of p53.Int J Mol Sci2022
35429501Mitogen-activated protein kinase phosphatase-1 controls PD-L1 expression by regulating type I interferon during systemic Escherichia coli infection.J Biol Chem2022
34694609PAR-CLIP: A Method for Transcriptome-Wide Identification of RNA Binding Protein Interaction Sites.Methods Mol Biol2022
34316033Cytokine-enhanced cytolytic activity of exosomes from NK Cells.Cancer Gene Ther2022
33334821The p53-induced RNA-binding protein ZMAT3 is a splicing regulator that inhibits the splicing of oncogenic CD44 variants in colorectal carcinoma.Genes Dev2021
33503264A non-radioactive, improved PAR-CLIP and small RNA cDNA library preparation protocol.Nucleic Acids Res2021
33657395MicroRNA-221 and -222 modulate intestinal inflammatory Th17 cell response as negative feedback regulators downstream of interleukin-23.Immunity2021
34890234The nuclear transcription factor, TAF7, is a cytoplasmic regulator of protein synthesis.Sci Adv2021
34580177MKP-1 modulates ubiquitination/phosphorylation of TLR signaling.Life Sci Alliance2021
34774131Balancing of mitochondrial translation through METTL8-mediated m<sup>3</sup>C modification of mitochondrial tRNAs.Mol Cell2021
34039638Knockout of MAPK Phosphatase-1 Exaggerates Type I IFN Response during Systemic <i>Escherichia coli</i> Infection.J Immunol2021
34151974The miR-26 family regulates neural differentiation-associated microRNAs and mRNAs by directly targeting REST.J Cell Sci2021
33983685RNA Externalized by Neutrophil Extracellular Traps Promotes Inflammatory Pathways in Endothelial Cells.Arthritis Rheumatol2021
33979654Dynamic imaging of nascent RNA reveals general principles of transcription dynamics and stochastic splice site selection.Cell2021
34001972A miR-375/YAP axis regulates neuroendocrine differentiation and tumorigenesis in lung carcinoid cells.Sci Rep2021
32438484Proximity-CLIP and Expedited Non-Radioactive Library Preparation of Small RNA Footprints for Next-Generation Sequencing.Curr Protoc Mol Biol2020
31768017RNA-binding protein IGF2BP1 maintains leukemia stem cell properties by regulating HOXB4, MYB, and ALDH1A1.Leukemia2020
32943634Multiple capsid protein binding sites mediate selective packaging of the alphavirus genomic RNA.Nat Commun2020
32710416Proximity-CLIP Provides a Snapshot of Protein-Occupied RNA Elements at Subcellular Resolution and Transcriptome-Wide Scale.Methods Mol Biol2020
33020268Posttranscriptional regulation of human endogenous retroviruses by RNA-binding motif protein 4, RBM4.Proc Natl Acad Sci U S A2020
31160600DHX36 prevents the accumulation of translationally inactive mRNAs with G4-structures in untranslated regions.Nat Commun2019
31601969Keratin 19 regulates cell cycle pathway and sensitivity of breast cancer cells to CDK inhibitors.Sci Rep2019
31371577Laboratory mice born to wild mice have natural microbiota and model human immune responses.Science2019
31221665Enhancement of LIN28B-induced hematopoietic reprogramming by IGF2BP3.Genes Dev2019
31101765miR-450a Acts as a Tumor Suppressor in Ovarian Cancer by Regulating Energy Metabolism.Cancer Res2019
30842218The splicing factor U2AF1 contributes to cancer progression through a noncanonical role in translation regulation.Genes Dev2019
29719618ONC201 kills breast cancer cells <i>in vitro</i> by targeting mitochondria.Oncotarget2018
30146314Argonaute-miRNA Complexes Silence Target mRNAs in the Nucleus of Mammalian Stem Cells.Mol Cell2018
29979962A Muscle-Specific Enhancer RNA Mediates Cohesin Recruitment and Regulates Transcription In trans.Mol Cell2018
30108179Human proteins that interact with RNA/DNA hybrids.Genome Res2018
30324908CD95/Fas ligand mRNA is toxic to cells.Elife2018
303741106mer seed toxicity in tumor suppressive microRNAs.Nat Commun2018
30478324Proximity-CLIP provides a snapshot of protein-occupied RNA elements in subcellular compartments.Nat Methods2018
30563203Dysregulation of Lipid Metabolism in Mkp-1 Deficient Mice during Gram-Negative Sepsis.Int J Mol Sci2018
29358286Aberrant tRNA processing causes an autoinflammatory syndrome responsive to TNF inhibitors.Ann Rheum Dis2018
29573145Profiling of m6A RNA modifications identified an age-associated regulation of AGO2 mRNA stability.Aging Cell2018
27871973PAR-CLIP and streamlined small RNA cDNA library preparation protocol for the identification of RNA binding protein target sites.Methods2017
28329689The Human CCHC-type Zinc Finger Nucleic Acid-Binding Protein Binds G-Rich Elements in Target mRNA Coding Sequences and Promotes Translation.Cell Rep2017
28297718DND1 maintains germline stem cells via recruitment of the CCR4-NOT complex to target mRNAs.Nature2017
29063830Many si/shRNAs can kill cancer cells by targeting multiple survival genes through an off-target mechanism.Elife2017
28895529<i>LARP4</i> mRNA codon-tRNA match contributes to LARP4 activity for ribosomal protein mRNA poly(A) tail length protection.Elife2017
28793268Characterizing Expression and Processing of Precursor and Mature Human tRNAs by Hydro-tRNAseq and PAR-CLIP.Cell Rep2017
26807845Post-transcriptional Control of Tumor Cell Autonomous Metastatic Potential by CCR4-NOT Deadenylase CNOT7.PLoS Genet2016
26463383PAR-CLIP: A Method for Transcriptome-Wide Identification of RNA Binding Protein Interaction Sites.Methods Mol Biol2016
27354703Evolving specificity of tRNA 3-methyl-cytidine-32 (m3C32) modification: a subset of tRNAsSer requires N6-isopentenylation of A37.RNA2016
25431026Laser capture microdissection followed by next-generation sequencing identifies disease-related microRNAs in psoriatic skin that reflect systemic microRNA changes in psoriasis.Exp Dermatol2015
26253535AUF1 promotes let-7b loading on Argonaute 2.Genes Dev2015
26351695Biochemical isolation of Argonaute protein complexes by Ago-APP.Proc Natl Acad Sci U S A2015
26720005RNA Polymerase III Output Is Functionally Linked to tRNA Dimethyl-G26 Modification.PLoS Genet2015
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Collaborators

Dimitrios G Anastasakis
National Institute for Arthritis and Musculoskeletal and Skin Disease
Co-authored papers 14
Aishe A Sarshad
Institute of Biomedicine, University of Gothenburg
Co-authored papers 8
Uwe Ohler
Humboldt University
Co-authored papers 5
Mihaela Zavolan
Co-authored papers 5
Yusen Liu
Co-authored papers 4
David L Corcoran
The University of North Carolina at Chapel Hill
Co-authored papers 4
Chris Sander
Broad Institute of MIT and Harvard
Co-authored papers 4
Scott Dewell
Co-authored papers 3
Cristina R Antonescu
Memorial Sloan Kettering Cancer Center
Co-authored papers 2
Barbara Rehermann
National Institute of Diabetes and Digestive and Kidney Diseases
Co-authored papers 2
Nicholas W Wood
UCL Queen Square Institute of Neurology
Co-authored papers 2
Myriam Gorospe
National Institute on Aging (NIA), National Institutes of Health (NIH)
Co-authored papers 2
Lodewyk F A Wessels
University Medical Centre Mannheim, University of Heidelberg
Co-authored papers 2
Vittorio Sartorelli
Co-authored papers 2
Kevin G Becker
National Institute on Aging, National Institutes of Health
Co-authored papers 2
Yuka Kanno
Co-authored papers 2
Han-Yu Shih
National Eye Institute, National Institutes of Health
Co-authored papers 2
John J O'Shea
National Institute of Arthritis, National Institutes of Health
Co-authored papers 2
Kotb Abdelmohsen
National Institute on Aging, National Institutes of Health
Co-authored papers 2
Pradeep Bandaru
Howard Hughes Medical Institute, University of California berkeley
Co-authored papers 2
Qing-Rong Chen
Center for Biomedical Informatics and Information Technology
Co-authored papers 1
Shurjo K Sen
Louisiana State University
Co-authored papers 1
Chen Yao
University of Texas Southwestern Medical Center
Co-authored papers 1
Matthew S Dreier
Co-authored papers 1
Pablo Landgraf
Co-authored papers 1
Stoyan Georgiev
Stanford University
Co-authored papers 1
Donna Voeller
Center for Cancer Research, National Cancer Institute
Co-authored papers 1
Xiaorong Wang
University of California Irvine
Co-authored papers 1
Xinghao Wang
Co-authored papers 1
Tomasz Gambin
Institute of Computer Science, Warsaw University of Technology
Co-authored papers 1
Release 1.2