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Author Details

Samuel O Purvine
Pacific Northwest National Laboratory
2001
130
47
PMIDPaper TitleJournal TitlePublished Year
36562730The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in the laboratory.Plant Cell2023
37695138Targeted curation of the gut microbial gene content modulating human cardiovascular disease.mBio2023
37459532Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management.Proc Natl Acad Sci U S A2023
36562730The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in the laboratory.Plant Cell2023
36993560Cysteine: an ancestral Cu binding ligand in green algae?bioRxiv2023
37422438Zn deficiency disrupts Cu and S homeostasis in Chlamydomonas resulting in over accumulation of Cu and Cysteine.Metallomics2023
37350639Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome.mSystems2023
37695138Targeted curation of the gut microbial gene content modulating human cardiovascular disease.mBio2023
36993560Cysteine: an ancestral Cu binding ligand in green algae?bioRxiv2023
37459532Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management.Proc Natl Acad Sci U S A2023
37422438Zn deficiency disrupts Cu and S homeostasis in Chlamydomonas resulting in over accumulation of Cu and Cysteine.Metallomics2023
37350639Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome.mSystems2023
36303775Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale.Front Bioinform2022
36303775Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale.Front Bioinform2022
35861508Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments.mSystems2022
35861508Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments.mSystems2022
34043287Cell-Type-Specific Proteomics Analysis of a Small Number of Plant Cells by Integrating Laser Capture Microdissection with a Nanodroplet Sample Processing Platform.Curr Protoc2021
33643238Mechanisms of Manganese(II) Oxidation by Filamentous Ascomycete Fungi Vary With Species and Time as a Function of Secretome Composition.Front Microbiol2021
33906945Anaerobic gut fungi are an untapped reservoir of natural products.Proc Natl Acad Sci U S A2021
33579822Widespread polycistronic gene expression in green algae.Proc Natl Acad Sci U S A2021
34161254Soil metabolome response to whole-ecosystem warming at the Spruce and Peatland Responses under Changing Environments experiment.Proc Natl Acad Sci U S A2021
33622792Intracellular pathways for lignin catabolism in white-rot fungi.Proc Natl Acad Sci U S A2021
34043287Cell-Type-Specific Proteomics Analysis of a Small Number of Plant Cells by Integrating Laser Capture Microdissection with a Nanodroplet Sample Processing Platform.Curr Protoc2021
33927199Decrypting bacterial polyphenol metabolism in an anoxic wetland soil.Nat Commun2021
34402628Specialization in a Nitrogen-Fixing Symbiosis: Proteome Differences Between <i>Sinorhizobium medicae</i> Bacteria and Bacteroids.Mol Plant Microbe Interact2021
33906945Anaerobic gut fungi are an untapped reservoir of natural products.Proc Natl Acad Sci U S A2021
33622792Intracellular pathways for lignin catabolism in white-rot fungi.Proc Natl Acad Sci U S A2021
33927199Decrypting bacterial polyphenol metabolism in an anoxic wetland soil.Nat Commun2021
33643238Mechanisms of Manganese(II) Oxidation by Filamentous Ascomycete Fungi Vary With Species and Time as a Function of Secretome Composition.Front Microbiol2021
33579822Widespread polycistronic gene expression in green algae.Proc Natl Acad Sci U S A2021
34402628Specialization in a Nitrogen-Fixing Symbiosis: Proteome Differences Between <i>Sinorhizobium medicae</i> Bacteria and Bacteroids.Mol Plant Microbe Interact2021
34161254Soil metabolome response to whole-ecosystem warming at the Spruce and Peatland Responses under Changing Environments experiment.Proc Natl Acad Sci U S A2021
32350400The National Microbiome Data Collaborative: enabling microbiome science.Nat Rev Microbiol2020
32245809Outer membrane vesicles catabolize lignin-derived aromatic compounds in <i>Pseudomonas putida</i> KT2440.Proc Natl Acad Sci U S A2020
32350400The National Microbiome Data Collaborative: enabling microbiome science.Nat Rev Microbiol2020
31872761Structure Dependent Determination of Organophosphate Targets in Mammalian Tissues Using Activity-Based Protein Profiling.Chem Res Toxicol2020
33291229The Specific Carbohydrate Diet and Diet Modification as Induction Therapy for Pediatric Crohn's Disease: A Randomized Diet Controlled Trial.Nutrients2020
32849338Functional Genomics, Transcriptomics, and Proteomics Reveal Distinct Combat Strategies Between Lineages of Wood-Degrading Fungi With Redundant Wood Decay Mechanisms.Front Microbiol2020
31872761Structure Dependent Determination of Organophosphate Targets in Mammalian Tissues Using Activity-Based Protein Profiling.Chem Res Toxicol2020
33291229The Specific Carbohydrate Diet and Diet Modification as Induction Therapy for Pediatric Crohn's Disease: A Randomized Diet Controlled Trial.Nutrients2020
32849338Functional Genomics, Transcriptomics, and Proteomics Reveal Distinct Combat Strategies Between Lineages of Wood-Degrading Fungi With Redundant Wood Decay Mechanisms.Front Microbiol2020
32245809Outer membrane vesicles catabolize lignin-derived aromatic compounds in <i>Pseudomonas putida</i> KT2440.Proc Natl Acad Sci U S A2020
30659148Multiomics resolution of molecular events during a day in the life of Chlamydomonas.Proc Natl Acad Sci U S A2019
31830917Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis.BMC Genomics2019
30659148Multiomics resolution of molecular events during a day in the life of Chlamydomonas.Proc Natl Acad Sci U S A2019
30767514Mineral Surfaces as Agents of Environmental Proteolysis: Mechanisms and Controls.Environ Sci Technol2019
30979840Deep-Subsurface Pressure Stimulates Metabolic Plasticity in Shale-Colonizing <i>Halanaerobium</i> spp.Appl Environ Microbiol2019
30663714Single-throughput Complementary High-resolution Analytical Techniques for Characterizing Complex Natural Organic Matter Mixtures.J Vis Exp2019
31243331In situ transformation of ethoxylate and glycol surfactants by shale-colonizing microorganisms during hydraulic fracturing.ISME J2019
31830917Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis.BMC Genomics2019
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Collaborators

Richard D Smith
Pacific Northwest National Laboratory
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Mary S Lipton
Pacific Northwest National Laboratory
Co-authored papers 33
Matthew E Monroe
Pacific Northwest National Laboratory
Co-authored papers 29
David G Camp
Co-authored papers 20
Joshua N Adkins
Co-authored papers 20
Ronald J Moore
Co-authored papers 18
Marina A Gritsenko
Pacific Northwest National Laboratory
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Ljiljana Pa??a-Toli??
Pacific Northwest National Laboratory
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Erika M Zink
Pacific Northwest National Laboratory
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Feng Yang
Howard Hughes Medical Institute, University of California San Diego
Co-authored papers 10
Thomas O Metz
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Rui Zhao
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Eugene Kolker
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Therese R W Clauss
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Si Wu
The Fourth Hospital of Hebei Medical University
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Gordon A Anderson
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David R Goodlett
University of Victoria
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Daniel J Orton
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Charles Ansong
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Kristin E Burnum-Johnson
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Rosalie K Chu
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Anil K Shukla
Pacific Northwest National Laboratory
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Young-Mo Kim
Hanyang University
Co-authored papers 6
Samuel H Payne
Brigham Young University
Co-authored papers 6
Katrina M Waters
Pacific Northwest National Laboratory
Co-authored papers 6
Athena A Schepmoes
Pacific Northwest National Laboratory
Co-authored papers 6
Paul D Piehowski
Pacific Northwest National Laboratory
Co-authored papers 6
Tao Liu
Pacific Northwest National Laboratory
Co-authored papers 6
Bobbie-Jo M Webb-Robertson
Pacific Northwest National Laboratory
Co-authored papers 5
Release 1.2