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Author Details

Marta Gut
Universitat de Barcelona (UB)
2010
156
56
PMIDPaper TitleJournal TitlePublished Year
38030727Identification of constrained sequence elements across 239 primate genomes.Nature2024
36611239Liquidhope: methylome and genomic profiling from very limited quantities of plasma-derived DNA.Brief Bioinform2023
38010338Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales.Microb Genom2023
37797305Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome.DNA Res2023
37850903A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797).G3 (Bethesda)2023
37351572A critical spotlight on the paradigms of FFPE-DNA sequencing.Nucleic Acids Res2023
37251933Evaluation of circulating tumor DNA by electropherogram analysis and methylome profiling in high-risk neuroblastomas.Front Oncol2023
37205491The landscape of tolerated genetic variation in humans and primates.bioRxiv2023
37272812A Stenotrophomonas maltophilia TetR-Like Transcriptional Regulator Involved in Fatty Acid Metabolism Is Controlled by Quorum Sensing Signals.Appl Environ Microbiol2023
37137526Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain).DNA Res2023
37262156The landscape of tolerated genetic variation in humans and primates.Science2023
37262161A global catalog of whole-genome diversity from 233 primate species.Science2023
36587276A chromosome-level genome assembly enables the identification of the follicule stimulating hormone receptor as the master sex-determining gene in the flatfish Solea senegalensis.Mol Ecol Resour2023
34687742PLCγ1/PKCθ Downstream Signaling Controls Cutaneous T-Cell Lymphoma Development and Progression.J Invest Dermatol2022
35583263Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad.DNA Res2022
36002559In silico validation of RNA-Seq results can identify gene fusions with oncogenic potential in glioblastoma.Sci Rep2022
36202811A method for multiplexed full-length single-molecule sequencing of the human mitochondrial genome.Nat Commun2022
36220894MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution.Nat Struct Mol Biol2022
35012964Diagnosis of Genetic White Matter Disorders by Singleton Whole-Exome and Genome Sequencing Using Interactome-Driven Prioritization.Neurology2022
34688835Emergence of 16S rRNA methyltransferases among carbapenemase-producing Enterobacterales in Spain studied by whole-genome sequencing.Int J Antimicrob Agents2022
32273478Genetic lesions in MYC and STAT3 drive oncogenic transcription factor overexpression in plasmablastic lymphoma.Haematologica2021
33792947Variation in predicted COVID-19 risk among lemurs and lorises.Am J Primatol2021
33802698Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in <i>Ostreococcus tauri</i>.Cells2021
34815787Interleukin-4 and interleukin-13 induce different metabolic profiles in microglia and macrophages that relate with divergent outcomes after spinal cord injury.Theranostics2021
34429448Mitogenomic analysis of extant condor species provides insight into the molecular evolution of vultures.Sci Rep2021
34621020E3 ubiquitin ligase Atrogin-1 mediates adaptive resistance to KIT-targeted inhibition in gastrointestinal stromal tumor.Oncogene2021
34413140X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19.Sci Immunol2021
33980650Occurrence of the <i>p019</i> Gene in the <i>bla</i><sub>KPC</sub>-Harboring Plasmids: Adverse Clinical Impact for Direct Tracking of KPC-Producing <i>Klebsiella pneumoniae</i> by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.J Clin Microbiol2021
33952594An Improved Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Data Analysis Pipeline for the Identification of Carbapenemase-Producing Klebsiella pneumoniae.J Clin Microbiol2021
34050148Impact of DNA methylation on 3D genome structure.Nat Commun2021
33106291RNA sequencing and Immunohistochemistry Reveal <i>ZFN7</i> as a Stronger Marker of Survival than Molecular Subtypes in G-CIMP-negative Glioblastoma.Clin Cancer Res2021
31529539Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence.Plant J2020
31702774Phylogenomics Identifies an Ancestral Burst of Gene Duplications Predating the Diversification of Aphidomorpha.Mol Biol Evol2020
31980558Diagnostic value of bone marrow core biopsy patterns in lymphoplasmacytic lymphoma/Waldenström macroglobulinaemia and description of its mutational profiles by targeted NGS.J Clin Pathol2020
33168033Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel.Genome Biol2020
33028839Framework for quality assessment of whole genome cancer sequences.Nat Commun2020
33318526Development of whole-genome multiplex assays and construction of an integrated genetic map using SSR markers in Senegalese sole.Sci Rep2020
32998960Glioblastoma TCGA Mesenchymal and IGS 23 Tumors are Identifiable by IHC and have an Immune-phenotype Indicating a Potential Benefit from Immunotherapy.Clin Cancer Res2020
32850563Case Report: Benign Infantile Seizures Temporally Associated With COVID-19.Front Pediatr2020
32817379Tracking of Antibiotic Resistance Transfer and Rapid Plasmid Evolution in a Hospital Setting by Nanopore Sequencing.mSphere2020
32814051Alternative Enhancer Usage and Targeted Polycomb Marking Hallmark Promoter Choice during T Cell Differentiation.Cell Rep2020
32667968Blueprint of human thymopoiesis reveals molecular mechanisms of stage-specific TCR enhancer activation.J Exp Med2020
32327644Functional and molecular heterogeneity of D2R neurons along dorsal ventral axis in the striatum.Nat Commun2020
32518403Benchmarking single-cell RNA-sequencing protocols for cell atlas projects.Nat Biotechnol2020
32457347Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings.Nat Commun2020
32317694Identification of tipifarnib sensitivity biomarkers in T-cell acute lymphoblastic leukemia and T-cell lymphoma.Sci Rep2020
30639209Patient-Specific iPSC-Derived Astrocytes Contribute to Non-Cell-Autonomous Neurodegeneration in Parkinson's Disease.Stem Cell Reports2019
31645421The Genome Sequence of the Eastern Woodchuck (<i>Marmota monax</i>) - A Preclinical Animal Model for Chronic Hepatitis B.G3 (Bethesda)2019
31882973High degree of polyclonality hinders somatic mutation calling in lung brush samples of COPD cases and controls.Sci Rep2019
30245085Mutational Profile of Aggressive, Localised Prostate Cancer from African Caribbean Men Versus European Ancestry Men.Eur Urol2019
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Collaborators

Ivo Gut
Spain Universitat de Barcelona (UB)
Co-authored papers 92
Simon Heath
Barcelona Institute of Science and Technology (BIST)
Co-authored papers 28
Tyler Alioto
Universitat de Barcelona (UB)
Co-authored papers 23
Sergi Beltran
Hospital Universitari Vall d'Hebron
Co-authored papers 20
Elias Campo
Institute for Biomedical Research August Pi I Sunyer
Co-authored papers 12
Tomas Marques-Bonet
University of California san francisco
Co-authored papers 12
Marc Dabad
Universitat de Barcelona (UB)
Co-authored papers 11
Carlos L??pez-Ot??n
Instituto Universitario de Oncologia, Universidad de Oviedo
Co-authored papers 10
Romain Fenouil
Universite de Toulon, CNRS
Co-authored papers 10
Alfonso Valencia
Josep Carreras Leukaemia Research Institute (IJC)
Co-authored papers 10
Hendrik G Stunnenberg
Co-authored papers 9
Sophia Derdak
Medical University of Vienna
Co-authored papers 9
Holger Heyn
Barcelona Institute of Science and Technology, Spain Universitat Pompeu Fabra
Co-authored papers 8
Xose S Puente
University of Oviedo
Co-authored papers 8
V??ctor Quesada
Instituto Universitario de Oncologia, Universidad de Oviedo
Co-authored papers 7
Xavier Estivill
Sidra Medical Center
Co-authored papers 7
Paul Flicek
European Bioinformatics Institute
Co-authored papers 7
Arcadi Navarro
Barcelonabeta Brain Research Center (BBRC), Pasqual Maragall Foundation
Co-authored papers 7
Toni Gabald??n
Catalan Institution for Research and Advanced Studies
Co-authored papers 7
Dirk Eick
Helmholtz Center Munich and Center for Integrated Protein Science Munich (CIPSM)
Co-authored papers 6
David Torrents
Institucio Catalana de Recerca i Estudis Avancats (ICREA)
Co-authored papers 6
Marina Marcet-Houben
Institute for Research in Biomedicine (IRB)
Co-authored papers 5
Roderic Guig??
Barcelona Institute of Science and Technology
Co-authored papers 5
Laura Clarke
Co-authored papers 5
Paolo Ribeca
The James Hutton Institute
Co-authored papers 5
Alejandro Valenzuela
Co-authored papers 5
Francesc Castro-Giner
University of Basel and University Hospital Basel
Co-authored papers 4
Joost H A Martens
Co-authored papers 4
Mattia Frontini
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Pedro G Ferreira
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Release 1.2