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Author Details

Matteo Re
Universita degli Studi di Milano
2006
17
10
PMIDPaper TitleJournal TitlePublished Year
32444882parSMURF, a high-performance computing tool for the genome-wide detection of pathogenic variants.Gigascience2020
32107391Network modeling of patients' biomolecular profiles for clinical phenotype/outcome prediction.Sci Rep2020
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
28592878Imbalance-Aware Machine Learning for Predicting Rare and Common Disease-Associated Non-Coding Variants.Sci Rep2017
27256314RANKS: a flexible tool for node label ranking and classification in biological networks.Bioinformatics2016
27604469An expanded evaluation of protein function prediction methods shows an improvement in accuracy.Genome Biol2016
24726035An extensive analysis of disease-gene associations using network integration and fast kernel-based gene prioritization methods.Artif Intell Med2014
24843788Think globally and solve locally: secondary memory-based network learning for automated multi-species function prediction.Gigascience2014
23500503A neural network algorithm for semi-supervised node label learning from unbalanced data.Neural Netw2013
24407295Network-based drug ranking and repositioning with respect to DrugBank therapeutic categories.IEEE/ACM Trans Comput Biol Bioinform2013
23095178Cancer module genes ranking using kernelized score functions.BMC Bioinformatics2012
23221088A fast ranking algorithm for predicting gene functions in biomolecular networks.IEEE/ACM Trans Comput Biol Bioinform2012
23308055Regeneration-associated WNT signaling is activated in long-term reconstituting AC133bright acute myeloid leukemia cells.Neoplasia2012
20375460Noise tolerance of multiple classifier systems in data integration-based gene function prediction.J Integr Bioinform2010
18809300Detecting conserved coding genomic regions through signal processing of nucleotide substitution patterns.Artif Intell Med2009
19737408Accurate discrimination of conserved coding and non-coding regions through multiple indicators of evolutionary dynamics.BMC Bioinformatics2009
16343814A new strategy to identify novel genes and gene isoforms: Analysis of human chromosomes 15, 21 and 22.Gene2006
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Collaborators

Giorgio Valentini
Universita degli Studi di Milano
Co-authored papers 14
Marco Mesiti
Universita degli Studi di Milano
Co-authored papers 7
Marco Frasca
Universita degli Studi di Milano
Co-authored papers 5
Alberto Paccanaro
University of London
Co-authored papers 4
Alessandro Petrini
Universita degli Studi di Milano
Co-authored papers 3
Peter N Robinson
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 3
Alfonso E Romero
University of Miami
Co-authored papers 3
Giuliano Grossi
Universita degli Studi di Milano
Co-authored papers 3
Prajwal Bhat
Royal Holloway University of London
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Richard Bonneau
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Nevena Veljkovic
Heliant Ltd
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Branislava Gemovic
Vinca Institute of Nuclear Sciences, University of Belgrade
Co-authored papers 2
Iddo Friedberg
Iowa State University
Co-authored papers 2
David T Jones
University College London
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Tunca Do??an
Hacettepe University
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Filip Ginter
University of Turku
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Steven E Brenner
University of California berkeley
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Max Schubach
Berlin Institute of Health of Health at Charite - Universitatsmedizin Berlin
Co-authored papers 2
Jos?? M Fern??ndez
Hospital Universitario y Politecnico la Fe
Co-authored papers 2
Renzhi Cao
Pacific Lutheran University
Co-authored papers 2
Indika Kahanda
University of North Florida
Co-authored papers 2
Rita Casadio
Department of Pharmacy and Biotechnology, University of Bologna
Co-authored papers 2
Sayoni Das
University College London
Co-authored papers 2
Burkhard Rost
Technical University of Munich (TUM)
Co-authored papers 2
Alfredo Benso
Italy Consorzio Interuniversitario Nazionale per l'Informatica
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Giuseppe Profiti
University of Bologna
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Kai Hakala
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Christophe Dessimoz
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Release 1.2