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Author Details

Li Ding
McDonnell Genome Institute, Washington University School of Medicine
1997
214
94
PMIDPaper TitleJournal TitlePublished Year
37592035Single-nucleotide variant calling in single-cell sequencing data with Monopogen.Nat Biotechnol2024
37592035Single-nucleotide variant calling in single-cell sequencing data with Monopogen.Nat Biotechnol2024
35169076LINE-1 expression in cancer correlates with p53 mutation, copy number alteration, and S phase checkpoint.Proc Natl Acad Sci U S A2022
35898895NCAPG2 Is a Novel Prognostic Biomarker and Promotes Cancer Stem Cell Maintenance in Low-Grade Glioma.Front Oncol2022
35646902Nuclear GSK-3β and Oncogenic KRas Lead to the Retention of Pancreatic Ductal Progenitor Cells Phenotypically Similar to Those Seen in IPMN.Front Cell Dev Biol2022
35605912Effects of itraconazole and rifampicin on the pharmacokinetics and safety of youkenafil, a novel phosphodiesterase type 5 inhibitor, in healthy Chinese subjects.Eur J Pharm Sci2022
35667090Upregulated SPAG6 promotes acute myeloid leukemia progression through MYO1D that regulates the EGFR family expression.Blood Adv2022
35236940Cancer proteogenomics: current impact and future prospects.Nat Rev Cancer2022
35169076LINE-1 expression in cancer correlates with p53 mutation, copy number alteration, and S phase checkpoint.Proc Natl Acad Sci U S A2022
34996889Author Correction: Comprehensive characterization of 536 patient-derived xenograft models prioritizes candidates for targeted treatment.Nat Commun2022
35646902Nuclear GSK-3β and Oncogenic KRas Lead to the Retention of Pancreatic Ductal Progenitor Cells Phenotypically Similar to Those Seen in IPMN.Front Cell Dev Biol2022
35605912Effects of itraconazole and rifampicin on the pharmacokinetics and safety of youkenafil, a novel phosphodiesterase type 5 inhibitor, in healthy Chinese subjects.Eur J Pharm Sci2022
35667090Upregulated SPAG6 promotes acute myeloid leukemia progression through MYO1D that regulates the EGFR family expression.Blood Adv2022
35898895NCAPG2 Is a Novel Prognostic Biomarker and Promotes Cancer Stem Cell Maintenance in Low-Grade Glioma.Front Oncol2022
34996889Author Correction: Comprehensive characterization of 536 patient-derived xenograft models prioritizes candidates for targeted treatment.Nat Commun2022
35236940Cancer proteogenomics: current impact and future prospects.Nat Rev Cancer2022
33417831Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma.Cancer Cell2021
36969355Single-cell manifold-preserving feature selection for detecting rare cell populations.Nat Comput Sci2021
33912478The Direct Semi-Quantitative Detection of 18 Pathogens and Simultaneous Screening for Nine Resistance Genes in Clinical Urine Samples by a High-Throughput Multiplex Genetic Detection System.Front Cell Infect Microbiol2021
33963182Co-evolution of tumor and immune cells during progression of multiple myeloma.Nat Commun2021
33691015AeQTL: eQTL analysis using region-based aggregation of rare genomic variants.Pac Symp Biocomput2021
33904371Genomic population structure of <i>Helicobacter pylori</i> Shanghai isolates and identification of genomic features uniquely linked with pathogenicity.Virulence2021
33796222Genomic and neoantigen evolution from primary tumor to first metastases in head and neck squamous cell carcinoma.Oncotarget2021
33577785Proteogenomic and metabolomic characterization of human glioblastoma.Cancer Cell2021
34162761Transcription factor PAX4 facilitates gastric cancer progression through interacting with miR-27b-3p/Grb2 axis.Aging (Albany NY)2021
33622385MEDALT: single-cell copy number lineage tracing enabling gene discovery.Genome Biol2021
34156976The clear cell sarcoma functional genomic landscape.J Clin Invest2021
33461213MSIsensor-ct: microsatellite instability detection using cfDNA sequencing data.Brief Bioinform2021
34261773Correction: Glycogen Synthase Kinase-3 Inhibition Sensitizes Pancreatic Cancer Cells to Chemotherapy by Abrogating the TopBP1/ATR-mediated DNA Damage Response.Clin Cancer Res2021
33989520Isotope tracing in adult zebrafish reveals alanine cycling between melanoma and liver.Cell Metab2021
33875650Spatially interacting phosphorylation sites and mutations in cancer.Nat Commun2021
33417831Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma.Cancer Cell2021
34572800Genomic Determinants of Homologous Recombination Deficiency across Human Cancers.Cancers (Basel)2021
34731541RNA Splicing and Immune-Checkpoint Inhibition.N Engl J Med2021
34429404Comprehensive characterization of 536 patient-derived xenograft models prioritizes candidatesfor targeted treatment.Nat Commun2021
34591593Genomic Profiling of Lung Adenocarcinoma in Never-Smokers.J Clin Oncol2021
35121865Moving pan-cancer studies from basic research toward the clinic.Nat Cancer2021
36969355Single-cell manifold-preserving feature selection for detecting rare cell populations.Nat Comput Sci2021
33912478The Direct Semi-Quantitative Detection of 18 Pathogens and Simultaneous Screening for Nine Resistance Genes in Clinical Urine Samples by a High-Throughput Multiplex Genetic Detection System.Front Cell Infect Microbiol2021
33796222Genomic and neoantigen evolution from primary tumor to first metastases in head and neck squamous cell carcinoma.Oncotarget2021
33904371Genomic population structure of <i>Helicobacter pylori</i> Shanghai isolates and identification of genomic features uniquely linked with pathogenicity.Virulence2021
33875650Spatially interacting phosphorylation sites and mutations in cancer.Nat Commun2021
33622385MEDALT: single-cell copy number lineage tracing enabling gene discovery.Genome Biol2021
33691015AeQTL: eQTL analysis using region-based aggregation of rare genomic variants.Pac Symp Biocomput2021
33577785Proteogenomic and metabolomic characterization of human glioblastoma.Cancer Cell2021
35121865Moving pan-cancer studies from basic research toward the clinic.Nat Cancer2021
34591593Genomic Profiling of Lung Adenocarcinoma in Never-Smokers.J Clin Oncol2021
34731541RNA Splicing and Immune-Checkpoint Inhibition.N Engl J Med2021
34429404Comprehensive characterization of 536 patient-derived xenograft models prioritizes candidatesfor targeted treatment.Nat Commun2021
34572800Genomic Determinants of Homologous Recombination Deficiency across Human Cancers.Cancers (Basel)2021
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Collaborators

Richard K Wilson
The Ohio State University
Co-authored papers 80
Elaine R Mardis
The Ohio State University
Co-authored papers 76
Michael C Wendl
Washington University in St Louis
Co-authored papers 50
Michael D McLellan
McDonnell Genome Institute, Washington University in St. Louis
Co-authored papers 46
Robert S Fulton
McDonnell Genome Institute, Washington University School of Medicine
Co-authored papers 44
Ken Chen
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Co-authored papers 42
Timothy J Ley
Washington University School of Medicine
Co-authored papers 37
Daniel C Koboldt
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Co-authored papers 31
Matthew A Wyczalkowski
Washington University in St Louis
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Feng Chen
Washington University in St Louis
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Charles Lu
Co-authored papers 26
David E Larson
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Christopher A Miller
Washington University School of Medicine
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Joshua F McMichael
Washington University
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John F DiPersio
Washington University School of Medicine
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Song Cao
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Lucinda Fulton
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Jinghui Zhang
Changhai Hospital, Second Military Medical University
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Cyriac Kandoth
University of California los angeles
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Matthew J Walter
Washington University School of Medicine in St. Louis
Co-authored papers 20
Timothy A Graubert
Massachusetts General Hospital
Co-authored papers 19
Matthew J Ellis
Co-authored papers 18
Kuan-Lin Huang
Icahn School of Medicine at Mount Sinai
Co-authored papers 18
Michael Rusch
St Jude Children's Research Hospital
Co-authored papers 18
John Easton
St Jude Children's Research Hospital
Co-authored papers 18
Qunyuan Zhang
Co-authored papers 17
Beifang Niu
Co-authored papers 16
Xiang Chen
St. Jude Children's Research Hospital
Co-authored papers 16
Matthew H Bailey
Department of Biology at Brigham Young University
Co-authored papers 15
Daniel C Link
Washington University School of Medicine
Co-authored papers 15
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