Author details

Full Name

Giuseppe Agapito

Affiliation

Data Analytics Research Center, University Magna Graecia of Catanzaro

ORCID

Career Start Year

2012

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37895264	An Exploratory Application of Multilayer Networks and Pathway Analysis in Pharmacogenomics.	Genes (Basel)	2023
34902133	Clustering Methods for Microarray Data Sets.	Methods Mol Biol	2022
35625946	A Prognostic and Carboplatin Response Predictive Model in Ovarian Cancer: A Mono-Institutional Retrospective Study Based on Clinics and Pharmacogenomics.	Biomedicines	2022
36278559	Bioinformatics and High-Performance Computing Methods for Deciphering and Fighting COVID-19-Editorial.	BioTech (Basel)	2022
35997341	Application of CCTV Methodology to Analyze COVID-19 Evolution in Italy.	BioTech (Basel)	2022
36063560	Pathway integration and annotation: building a puzzle with non-matching pieces and no reference picture.	Brief Bioinform	2022
36167506	A statistical network pre-processing method to improve relevance and significance of gene lists in microarray gene expression studies.	BMC Bioinformatics	2022
35892929	Challenges and Limitations of Biological Network Analysis.	BioTech (Basel)	2022
36292724	A Python Clustering Analysis Protocol of Genes Expression Data Sets.	Genes (Basel)	2022
35951505	Nine quick tips for pathway enrichment analysis.	PLoS Comput Biol	2022
35053305	Risk Alleles for Multiple Myeloma Susceptibility in ADME Genes.	Cells	2022
34902134	Microarray Data Analysis Protocol.	Methods Mol Biol	2022
34592927	Using BioPAX-Parser (BiP) to enrich lists of genes or proteins with pathway data.	BMC Bioinformatics	2021
33564777	International Comparisons of Harmonized Laboratory Value Trajectories to Predict Severe COVID-19: Leveraging the 4CE Collaborative Across 342 Hospitals and 6 Countries: A Retrospective Cohort Study.	medRxiv	2021
32235355	DMET<sup>TM</sup> Genotyping: Tools for Biomarkers Discovery in the Era of Precision Medicine.	High Throughput	2020
32756428	COVID-WAREHOUSE: A Data Warehouse of Italian COVID-19, Pollution, and Climate Data.	Int J Environ Res Public Health	2020
32437515	BioPAX-Parser: parsing and enrichment analysis of BioPAX pathways.	Bioinformatics	2020
31115894	Computer Tools to Analyze Microarray Data.	Methods Mol Biol	2019
30739312	Polymorphic Variants in NR1I3 and UGT2B7 Predict Taxane Neurotoxicity and Have Prognostic Relevance in Patients With Breast Cancer: A Case-Control Study.	Clin Pharmacol Ther	2019
29157465	DIETOS: A dietary recommender system for chronic diseases monitoring and management.	Comput Methods Programs Biomed	2018
29904017	A Parallel Software Pipeline for DMET Microarray Genotyping Data Analysis.	High Throughput	2018
29296186	Genetic variants associated with Fabry disease progression despite enzyme replacement therapy.	Oncotarget	2017
25971913	Ontology-Based Analysis of Microarray Data.	Methods Mol Biol	2016
26351205	Methodologies and experimental platforms for generating and analysing microarray and mass spectrometry-based omics data to support P4 medicine.	Brief Bioinform	2016
26607259	Identification of polymorphic variants associated with erlotinib-related skin toxicity in advanced non-small cell lung cancer patients by DMET microarray analysis.	Cancer Chemother Pharmacol	2016
27669316	OSAnalyzer: A Bioinformatics Tool for the Analysis of Gene Polymorphisms Enriched with Clinical Outcomes.	Microarrays (Basel)	2016
27825144	Genetic variants associated with gastrointestinal symptoms in Fabry disease.	Oncotarget	2016
27304055	DMETâ¿¢ (Drug Metabolism Enzymes and Transporters): a pharmacogenomic platform for precision medicine.	Oncotarget	2016
27045823	Extracting Cross-Ontology Weighted Association Rules from Gene Ontology Annotations.	IEEE/ACM Trans Comput Biol Bioinform	2016
25921876	Using GO-WAR for mining cross-ontology weighted association rules.	Comput Methods Programs Biomed	2015
26092773	DMET-Miner: Efficient discovery of association rules from pharmacogenomic data.	J Biomed Inform	2015
23341759	Visual data mining of biological networks: one size does not fit all.	PLoS Comput Biol	2013
23368786	Visualization of protein interaction networks: problems and solutions.	BMC Bioinformatics	2013
23035929	DMET-analyzer: automatic analysis of Affymetrix DMET data.	BMC Bioinformatics	2012

1 - 34 of 34

Alfredo Benso

Italy Consorzio Interuniversitario Nazionale per l'Informatica

Career Start Year 2011

Number of shared co-authors 0

Alessandro Savino

Consorzio Interuniversitario Nazionale per l'Informatica

Career Start Year 2011

Number of shared co-authors 0

Enrico Glaab

University of Luxembourg

Career Start Year 2009

Number of shared co-authors 0

Khader Shameer

School of Public Health, Imperial College London

Career Start Year 2006

Number of shared co-authors 0

Jan Baumbach

University of Hamburg

Career Start Year 2006

Number of shared co-authors 0

Arnaud Droit

Centre de Recherche du CHU de Quebec-Universite, Universite Laval

Career Start Year 2005

Number of shared co-authors 1

Dongxiao Zhu

Wayne State University

Career Start Year 2005

Number of shared co-authors 0

Doheon Lee

Korea Advanced Institute of Science and Technology

Career Start Year 2004

Number of shared co-authors 0

Wenjin Jim Zheng

University of Texas Health Science Center at Houston

Career Start Year 2004

Number of shared co-authors 0

F??tima Al-Shahrour

Spanish National Cancer Research Centre (CNIO)

Career Start Year 2003

Number of shared co-authors 0

Jake Y. Chen (CM4AI)

University of Alabama at Birmingham

Career Start Year 2003

Number of shared co-authors 0

J??rg Rahnenf??hrer

TU Dortmund University

Career Start Year 2002

Number of shared co-authors 0

Chunlei Wu

The Scripps Research Institute

Career Start Year 2002

Number of shared co-authors 5

Kristina Hanspers

Gladstone Institutes

Career Start Year 2001

Number of shared co-authors 0

Johan Rung

Uppsala University

Career Start Year 2001

Number of shared co-authors 0

Alberto Pascual-Montano

National Center for Biotechnology-CSIC

Career Start Year 2001

Number of shared co-authors 1

Carlos Prieto

Hospital Rey Juan Carlos

Career Start Year 2000

Number of shared co-authors 0

Hedi Peterson

Institute of Computer Science, University of Tartu

Career Start Year 2000

Number of shared co-authors 0

Laura I Furlong

Hospital del Mar Research Institute (IMIM), Pompeu Fabra University (UPF)

Career Start Year 2000

Number of shared co-authors 5

Youping Deng

John A. Burns School of Medicine, University of Hawaii at Manoa

Career Start Year 1999

Number of shared co-authors 0

Blaz Zupan

University of Ljubljana

Career Start Year 1998

Number of shared co-authors 2

Ralf Herwig

Max Planck Institute for Molecular Genetics

Career Start Year 1998

Number of shared co-authors 0

Jaak Vilo

Institute of Computer Science, University of Tartu

Career Start Year 1996

Number of shared co-authors 1

Ioannis Xenarios

University of Lausanne

Career Start Year 1994

Number of shared co-authors 1

Jill P Mesirov

University of California San Diego

Career Start Year 1992

Number of shared co-authors 0

Robert Gentleman

Center for Computational Biomedicine, Harvard Medical School

Career Start Year 1991

Number of shared co-authors 1

Bart De Moor

STADIUS Center for Dynamical Systems

Career Start Year 1990

Number of shared co-authors 0

Luciano Milanesi

Institute of Biomedical Technologies - National Research Council of Italy

Career Start Year 1982

Number of shared co-authors 2

Joaqu??n Dopazo

Andalusian Public Foundation Progress and Health-FPS

Career Start Year 1977

Number of shared co-authors 0

Yves A Lussier

Center for Biomedical Informatics and Biostatistics, University of Arizona

Career Start Year 1971

Number of shared co-authors 2

row(s) 1 - 30 of 30

Mario Cannataro

Data Analytics Research Center, University Magna Graecia of Catanzaro

Co-authored papers 26

Pietro Hiram Guzzi

Magna Graecia University

Co-authored papers 15

Marianna Milano

Data Analytics Research Center, University Magna Graecia of Catanzaro

Co-authored papers 10

Igor Jurisica

Schroeder Arthritis Institute

Co-authored papers 2

Chiara Zucco

Data Analytics Research Center, University Magna Graecia

Co-authored papers 2

Michael Matheny

American College of Medical Informatics, Department of Veteran Affairs, Harvard University T H Chan School of Public Health, Massachusetts Institute of Technology, The American Society for Clinical Investigation, University of Kentucky, Vanderbilt University Medical Center, Vanderbilt University Medical School

Co-authored papers 1

Chuan Hong

Harvard Medical School, USA Duke University

Co-authored papers 1

Martin Boeker

Institute of AI and Informatics in Medicine, Technical University of Munich

Co-authored papers 1

Yuan Luo

Northwestern University Feinberg School of Medicine

Co-authored papers 1

Vincent Benoit

Universite de Paris, Imagine Institute, INSERM UMR 1163