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Author Details

Raphael Gottardo
Fred Hutchinson Cancer Center
2003
156
49
PMIDPaper TitleJournal TitlePublished Year
36655191Antibody Correlates of Protection From Severe Respiratory Syncytial Virus Disease in a Vaccine Efficacy Trial.Open Forum Infect Dis2023
37674528Single-cell Profiling Uncovers a <i>Muc4</i>-Expressing Metaplastic Gastric Cell Type Sustained by <i>Helicobacter pylori</i>-driven Inflammation.Cancer Res Commun2023
36655191Antibody Correlates of Protection From Severe Respiratory Syncytial Virus Disease in a Vaccine Efficacy Trial.Open Forum Infect Dis2023
37392736Single-cell protein expression profiling resolves circulating and resident memory T cell diversity across tissues and infection contexts.Immunity2023
37321353Intradermal skin test with mRNA vaccines as a surrogate marker of T cell immunity in immunocompromised patients.J Infect2023
37426750An information theoretic approach to detecting spatially varying genes.Cell Rep Methods2023
37674528Single-cell Profiling Uncovers a <i>Muc4</i>-Expressing Metaplastic Gastric Cell Type Sustained by <i>Helicobacter pylori</i>-driven Inflammation.Cancer Res Commun2023
37392736Single-cell protein expression profiling resolves circulating and resident memory T cell diversity across tissues and infection contexts.Immunity2023
37321353Intradermal skin test with mRNA vaccines as a surrogate marker of T cell immunity in immunocompromised patients.J Infect2023
37426750An information theoretic approach to detecting spatially varying genes.Cell Rep Methods2023
34489601Integrated analysis of plasma and single immune cells uncovers metabolic changes in individuals with COVID-19.Nat Biotechnol2022
35385469Optimizing clinical dosing of combination broadly neutralizing antibodies for HIV prevention.PLoS Comput Biol2022
36091040The deficiency in Th2-like Tfh cells affects the maturation and quality of HIV-specific B cell response in viremic infection.Front Immunol2022
35817516An In Vivo Model of Human Macrophages in Metastatic Melanoma.J Immunol2022
35695527Monocyte Transcriptional Responses to Mycobacterium tuberculosis Associate with Resistance to Tuberculin Skin Test and Interferon Gamma Release Assay Conversion.mSphere2022
35803696Th2-Biased Transcriptional Profile Predicts HIV Envelope-Specific Polyfunctional CD4<sup>+</sup> T Cells That Correlated with Reduced Risk of Infection in RV144 Trial.J Immunol2022
35935978Early and Long-Term HIV-1 Immunogenicity Induced in Macaques by the Combined Administration of DNA, NYVAC and Env Protein-Based Vaccine Candidates: The AUP512 Study.Front Immunol2022
36266291The Immune Signatures data resource, a compendium of systems vaccinology datasets.Sci Data2022
35545675Extricating human tumour immune alterations from tissue inflammation.Nature2022
35413271Neoantigen-specific CD4<sup>+</sup> T cells in human melanoma have diverse differentiation states and correlate with CD8<sup>+</sup> T cell, macrophage, and B cell function.Cancer Cell2022
36316476Pan-vaccine analysis reveals innate immune endotypes predictive of antibody responses to vaccination.Nat Immunol2022
36252564Transcriptional and functional analyses of neoantigen-specific CD4 T cells during a profound response to anti-PD-L1 in metastatic Merkel cell carcinoma.J Immunother Cancer2022
36511483Defining cellular population dynamics at single-cell resolution during prostate cancer progression.Elife2022
35271706Humoral Responses Against Variants of Concern by COVID-19 mRNA Vaccines in Immunocompromised Patients.JAMA Oncol2022
35225231Global and context-specific transcriptional consequences of oncogenic Fbw7 mutations.Elife2022
34489601Integrated analysis of plasma and single immune cells uncovers metabolic changes in individuals with COVID-19.Nat Biotechnol2022
35078666Characterization of the cell-mediated immune response to Takeda's live-attenuated tetravalent dengue vaccine in adolescents participating in a phase 2 randomized controlled trial conducted in a dengue-endemic setting.Vaccine2022
35060479Transcriptional correlates of malaria in RTS,S/AS01-vaccinated African children: a matched case-control study.Elife2022
35073995IDEAS: individual level differential expression analysis for single-cell RNA-seq data.Genome Biol2022
35138909Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency.Sci Transl Med2022
34931002Single-cell immunology of SARS-CoV-2 infection.Nat Biotechnol2022
35803696Th2-Biased Transcriptional Profile Predicts HIV Envelope-Specific Polyfunctional CD4<sup>+</sup> T Cells That Correlated with Reduced Risk of Infection in RV144 Trial.J Immunol2022
35545675Extricating human tumour immune alterations from tissue inflammation.Nature2022
35695527Monocyte Transcriptional Responses to Mycobacterium tuberculosis Associate with Resistance to Tuberculin Skin Test and Interferon Gamma Release Assay Conversion.mSphere2022
35817516An In Vivo Model of Human Macrophages in Metastatic Melanoma.J Immunol2022
35413271Neoantigen-specific CD4<sup>+</sup> T cells in human melanoma have diverse differentiation states and correlate with CD8<sup>+</sup> T cell, macrophage, and B cell function.Cancer Cell2022
35385469Optimizing clinical dosing of combination broadly neutralizing antibodies for HIV prevention.PLoS Comput Biol2022
36511483Defining cellular population dynamics at single-cell resolution during prostate cancer progression.Elife2022
35935978Early and Long-Term HIV-1 Immunogenicity Induced in Macaques by the Combined Administration of DNA, NYVAC and Env Protein-Based Vaccine Candidates: The AUP512 Study.Front Immunol2022
36266291The Immune Signatures data resource, a compendium of systems vaccinology datasets.Sci Data2022
36091040The deficiency in Th2-like Tfh cells affects the maturation and quality of HIV-specific B cell response in viremic infection.Front Immunol2022
36252564Transcriptional and functional analyses of neoantigen-specific CD4 T cells during a profound response to anti-PD-L1 in metastatic Merkel cell carcinoma.J Immunother Cancer2022
36316476Pan-vaccine analysis reveals innate immune endotypes predictive of antibody responses to vaccination.Nat Immunol2022
35225231Global and context-specific transcriptional consequences of oncogenic Fbw7 mutations.Elife2022
35073995IDEAS: individual level differential expression analysis for single-cell RNA-seq data.Genome Biol2022
35271706Humoral Responses Against Variants of Concern by COVID-19 mRNA Vaccines in Immunocompromised Patients.JAMA Oncol2022
35060479Transcriptional correlates of malaria in RTS,S/AS01-vaccinated African children: a matched case-control study.Elife2022
34931002Single-cell immunology of SARS-CoV-2 infection.Nat Biotechnol2022
35138909Targeting an alternate Wilms' tumor antigen 1 peptide bypasses immunoproteasome dependency.Sci Transl Med2022
35078666Characterization of the cell-mediated immune response to Takeda's live-attenuated tetravalent dengue vaccine in adolescents participating in a phase 2 randomized controlled trial conducted in a dengue-endemic setting.Vaccine2022
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Collaborators

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University of British Columbia
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8Benaroya Research Institute
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Co-authored papers 3
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Co-authored papers 3
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Co-authored papers 3
Institute of Systems Biology, University of Washington
Co-authored papers 3
City University of New York School of Public Health
Co-authored papers 3
Centre de Recherche du CHU de Quebec-Universite, Universite Laval
Co-authored papers 3
Technische Universitat Munchen
Co-authored papers 3
Fred Hutchinson Cancer Center
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University of British Columbia
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Roswell Park Comprehensive Cancer Center
Co-authored papers 3
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University of Chicago
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Institute for Systems Biology
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