Author details

Full Name

Rosalba Lepore

Affiliation

Basel University Hospital and University of Basel

ORCID

Career Start Year

2011

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36798425	Analysis of electronic health records from three distinct and large populations reveals high prevalence and biases in the co-administration of drugs known to interact.	medRxiv	2023
37773046	Epitope-engineered human hematopoietic stem cells are shielded from CD123-targeted immunotherapy.	J Exp Med	2023
35602059	Heterogeneous Infectivity and Pathogenesis of SARS-CoV-2 Variants Beta, Delta and Omicron in Transgenic K18-hACE2 and Wildtype Mice.	Front Microbiol	2022
33456724	Unraveling the molecular basis of host cell receptor usage in SARS-CoV-2 and other human pathogenic Î²-CoVs.	Comput Struct Biotechnol J	2021
34660699	Quantitative Description of Surface Complementarity of Antibody-Antigen Interfaces.	Front Mol Biosci	2021
34595772	Assessing the accuracy of contact and distance predictions in CASP14.	Proteins	2021
34561912	Target highlights in CASP14: Analysis of models by structure providers.	Proteins	2021
34125897	DGLinker: flexible knowledge-graph prediction of disease-gene associations.	Nucleic Acids Res	2021
32610166	Neoantigen prediction and computational perspectives towards clinical benefit: recommendations from the ESMO Precision Medicine Working Group.	Ann Oncol	2020
32053168	About the need to make computational models of biological macromolecules available and discoverable.	Bioinformatics	2020
30298405	Modeling of Protein Tertiary and Quaternary Structures Based on Evolutionary Information.	Methods Mol Biol	2019
31442339	Target highlights in CASP13: Experimental target structures through the eyes of their authors.	Proteins	2019
30535291	Insights on protein thermal stability: a graph representation of molecular interactions.	Bioinformatics	2019
29788355	SWISS-MODEL: homology modelling of protein structures and complexes.	Nucleic Acids Res	2018
30367178	Genome-wide RNA-seq analysis indicates that the DAG1 transcription factor promotes hypocotyl elongation acting on ABA, ethylene and auxin signaling.	Sci Rep	2018
28472367	PIGSPro: prediction of immunoGlobulin structures v2.	Nucleic Acids Res	2017
28338016	Superposition-free comparison and clustering of antibody binding sites: implications for the prediction of the nature of their antigen.	Sci Rep	2017
27131789	PepComposer: computational design of peptides binding to a given protein surface.	Nucleic Acids Res	2016
27604469	An expanded evaluation of protein function prediction methods shows an improvement in accuracy.	Genome Biol	2016
25866995	Multistep current signal in protein translocation through graphene nanopores.	J Phys Chem B	2015
26249814	LoopIng: a template-based tool for predicting the structure of protein loops.	Bioinformatics	2015
24930144	Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies.	Bioinformatics	2014
23698860	TiPs: a database of therapeutic targets in pathogens and associated tools.	Bioinformatics	2013
22177949	Investigation of a potential mechanism for the inhibition of SmTGR by Auranofin and its implications for Plasmodium falciparum inhibition.	Biochem Biophys Res Commun	2012
22540925	Artemether resistance in vitro is linked to mutations in PfATP6 that also interact with mutations in PfMDR1 in travellers returning with Plasmodium falciparum infections.	Malar J	2012
21995318	Identification of the Schistosoma mansoni molecular target for the antimalarial drug artemether.	J Chem Inf Model	2011

1 - 26 of 26

Neeladri Sen

Institute of Structural and Molecular Biology, University College London

Career Start Year 2017

Number of shared co-authors 7

Daniel B Roche

Universita degli Studi di Milano - Computer Science Department - AnacletoLab

Career Start Year 2010

Number of shared co-authors 65

Jaume Bonet

Institute of Bioengineering, Ecole Polytechnique Federale de Lausanne

Career Start Year 2006

Number of shared co-authors 1

Dima Kozakov

Stony Brook University

Career Start Year 2005

Number of shared co-authors 4

Dina Schneidman-Duhovny

The Hebrew University of Jerusalem

Career Start Year 2003

Number of shared co-authors 7

Narcis Fernandez-Fuentes

Institute of Biological, Aberystwyth University

Career Start Year 2002

Number of shared co-authors 7

Yang Zhang

University of Michigan ann arbor

Career Start Year 2002

Number of shared co-authors 69

Liam J McGuffin

University of Reading

Career Start Year 2000

Number of shared co-authors 68

Jo??o P G L M Rodrigues

Stanford University

Career Start Year 1999

Number of shared co-authors 4

Daron M Standley

Osaka university

Career Start Year 1998

Number of shared co-authors 12

Juan Fern??ndez-Recio

Instituto de Ciencias de la Vid y del Vino (ICVV-CSIC)

Career Start Year 1997

Number of shared co-authors 8

Mallur S Madhusudhan

Indian Institute of Science Education and Research Pune

Career Start Year 1996

Number of shared co-authors 3

Marc F Lensink

University Lille, CNRS

Career Start Year 1996

Number of shared co-authors 5

Roberto Sanchez

Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai

Career Start Year 1996

Number of shared co-authors 6

Baldo Oliva

Universitat Pompeu Fabra

Career Start Year 1991

Number of shared co-authors 1

Haim J Wolfson

Tel Aviv University

Career Start Year 1991

Number of shared co-authors 7

Robert B Russell

Heidelberg University

Career Start Year 1991

Number of shared co-authors 2

Robert Preissner

Institute for Physiology, Charite-University Medicine Berlin

Career Start Year 1990

Number of shared co-authors 0

Ram Samudrala

Jacobs School of Medicine and Biomedical Sciences, University at Buffalo

Career Start Year 1990

Number of shared co-authors 2

Paul A Bates

The Francis Crick Institute

Career Start Year 1989

Number of shared co-authors 5

Roland L Dunbrack

Fox Chase Cancer Center

Career Start Year 1989

Number of shared co-authors 25

Miriam Eisenstein

Weizmann Institute of Science

Career Start Year 1988

Number of shared co-authors 5

Herman W T van Vlijmen

Leiden Academic Centre for Drug Research (LACDR), Leiden University

Career Start Year 1988

Number of shared co-authors 0

Andrej Sali (CM4AI)

University of California San Francisco

Career Start Year 1985

Number of shared co-authors 23

Ruben Abagyan

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California

Career Start Year 1981

Number of shared co-authors 1

Shoshana J Wodak

VIB-VUB Center for Structural Biology

Career Start Year 1975

Number of shared co-authors 15

Stephen H Bryant

National Center for Biotechnology Information

Career Start Year 1973

Number of shared co-authors 8

Shoba Ranganathan

Macquarie University

Career Start Year 1972

Number of shared co-authors 2

Andras Fiser

Albert Einstein College of Medicine

Career Start Year 1968

Number of shared co-authors 12

Jens Meiler

Vanderbilt University

Career Start Year 1954

Number of shared co-authors 9

row(s) 1 - 30 of 30

Anna Tramontano

Sapienza University of Rome

Co-authored papers 11

Torsten Schwede

University of Basel

Co-authored papers 5

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Co-authored papers 4

Andriy Kryshtafovych

University of California davis

Co-authored papers 3

Krzysztof Fidelis

University of California davis

Co-authored papers 2

Maya Topf

Leibniz-Institut fur Virologie (LIV)

Co-authored papers 2

Stefan Bienert

University of Basel

Co-authored papers 2

Andrzej Joachimiak

Center for Structural Biology of Infectious Diseases, University of Chicago

Co-authored papers 2

John Moult

Institute for Bioscience and Biotechnology Research

Co-authored papers 2

Gerardo Tauriello

University of Basel

Co-authored papers 2

Christopher Funk

University of Colorado School of Medicine

Co-authored papers 1

Sanja Glisic

Vinca Institute of Nuclear Sciences, The University of Belgrade

Co-authored papers 1

Bonaventura Clotet

IrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol

Co-authored papers 1

Angela Del Pozo

Instituto de Genetica Medica y Molecular (INGEMM), Hospital Universitario La Paz

Co-authored papers 1

Maria J Martin

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 1

Owen R Davies

Institute of Cell Biology, University of Edinburgh

Co-authored papers 1

Christophe Dessimoz

University of Lausanne

Co-authored papers 1

Kai Hakala

University of Turku

Co-authored papers 1

Domenico Cozzetto

Imperial College London

Co-authored papers 1

Amos Stern

Life Science Institute

Co-authored papers 1

Shanshan Zhang

Temple University

Co-authored papers 1

Marina Marcet-Houben

Institute for Research in Biomedicine (IRB)

Co-authored papers 1

Hans J Vogel

University of Calgary

Co-authored papers 1

Lucy Stols

Midwest Center for Structural Genomics, Argonne National Laboratory

Co-authored papers 1

John A Tainer

The University of Texas MD Anderson Cancer Center

Co-authored papers 1

Pooya Zakeri

Aarhus University

Co-authored papers 1

Alfredo Benso

Italy Consorzio Interuniversitario Nazionale per l'Informatica

Co-authored papers 1

Federico Minneci

University College London

Co-authored papers 1

Elena Cibri??n-Uhalte

European Bioinformatics Institute

Co-authored papers 1

Malvika Sharan

The Alan Turing Institute

Co-authored papers 1

1 - 30

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