Author details

Full Name

Damion Dooley

Affiliation

Simon Fraser University

ORCID

Career Start Year

2016

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36263822	CARD 2023: expanded curation, support for machine learning,Â and resistome prediction at the Comprehensive Antibiotic Resistance Database.	Nucleic Acids Res	2023
37469931	Ontological how and why: action and objective of planned processes in the food domain.	Front Artif Intell	2023
37267413	OntoTrek: 3D visualization of application ontology class hierarchies.	PLoS One	2023
37195738	Social Prescription Interventions Addressing Social Isolation and Loneliness in Older Adults: Meta-Review Integrating On-the-Ground Resources.	J Med Internet Res	2023
36748616	The DataHarmonizer: a tool for faster data harmonization, validation, aggregation and analysis of pathogen genomics contextual information.	Microb Genom	2023
36847566	A Schema for Digitized Surface Swab Site Metadata in Open-Source DNA Sequence Databases.	mSystems	2023
35169842	Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.	Gigascience	2022
35811979	Establishing a Common Nutritional Vocabulary - From Food Production to Diet.	Front Nutr	2022
34244718	Standardization of assay representation in the Ontology for Biomedical Investigations.	Database (Oxford)	2021
34697637	OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.	Database (Oxford)	2021
31665441	CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.	Nucleic Acids Res	2020
31601655	Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada.	Microbiol Resour Announc	2019
29765365	Human Activity Determines the Presence of Integron-Associated and Antibiotic Resistance Genes in Southwestern British Columbia.	Front Microbiol	2018
31304272	FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration.	NPJ Sci Food	2018
28694792	Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance.	Front Microbiol	2017
26656932	Sequence database versioning for command line and Galaxy bioinformatics servers.	Bioinformatics	2016

1 - 16 of 16

Jerven Bolleman

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Career Start Year 2013

Number of shared co-authors 5

James A Macklin

Agriculture and Agri-Food Canada

Career Start Year 2013

Number of shared co-authors 12

Marie-Ang??lique Laporte

Career Start Year 2011

Number of shared co-authors 5

Alasdair J G Gray

Heriot-Watt University

Career Start Year 2011

Number of shared co-authors 10

Anne E Thessen

Biodiversity Information Standards, Coastal and Estuarine Research Federation, Oregon State University, Phycological Society of America, Society of Professional Consultants, The Data Detektiv, University of Colorado Anschutz Medical Campus, University of Maryland College Park, Women in the Enterprise of Science and Technology

Career Start Year 2010

Number of shared co-authors 17

Alejandra Gonzalez-Beltran

Oxford e-Research Centre, University of Oxford

Career Start Year 2009

Number of shared co-authors 16

James Malone

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2009

Number of shared co-authors 22

Janna Hastings

Institute for Implementation Science in Health Care, University of Zurich

Career Start Year 2008

Number of shared co-authors 4

Csongor Nyulas

Stanford University

Career Start Year 2008

Number of shared co-authors 0

Evangelos Pafilis

Institute of Marine Biology

Career Start Year 2007

Number of shared co-authors 11

Christopher J O Baker

University of New Brunswick

Career Start Year 2007

Number of shared co-authors 1

Daniel Schober

Institute of Forensic Medicine, University of Bern

Career Start Year 2005

Number of shared co-authors 16

Leyla Garcia

European Bioinformatics Institute

Career Start Year 2005

Number of shared co-authors 3

Deborah L McGuinness

Rensselaer Polytechnic Institute

Career Start Year 2005

Number of shared co-authors 7

Norman Morrison

European Bioinformatics Institute

Career Start Year 2001

Number of shared co-authors 21

Indra Neil Sarkar

Center for Biomedical Informatics, Brown University

Career Start Year 2001

Number of shared co-authors 0

Tony Burdett

European Bioinformatics Institute

Career Start Year 2000

Number of shared co-authors 6

Karen Eilbeck

University of Utah

Career Start Year 1999

Number of shared co-authors 13

Marco Roos

Leiden University Medical Center

Career Start Year 1999

Number of shared co-authors 5

Michel Dumontier

Institute of Data Science, Maastricht University

Career Start Year 1998

Number of shared co-authors 23

Philippe Rocca-Serra

University of Oxford

Career Start Year 1998

Number of shared co-authors 22

Andra Waagmeester

Maastricht University

Career Start Year 1998

Number of shared co-authors 1

Robert Stevens

The University of Manchester

Career Start Year 1998

Number of shared co-authors 6

Katherine Wolstencroft

Leiden Institute of Advanced Computer Science, Leiden University

Career Start Year 1997

Number of shared co-authors 4

Susanna-Assunta Sansone

Oxford e-Research Centre, University of Oxford

Career Start Year 1997

Number of shared co-authors 24

Nick Juty

University of Manchester

Career Start Year 1997

Number of shared co-authors 4

Nirav Merchant

Data Science Institute, University of Arizona

Career Start Year 1995

Number of shared co-authors 1

Patricia L Whetzel

University of Colorado Anschutz Medical Campus

Career Start Year 1993

Number of shared co-authors 23

Mark D Wilkinson

Universidad Politecnica de Madrid (UPM)

Career Start Year 1993

Number of shared co-authors 3

Carole Goble

University of Manchester

Career Start Year 1993

Number of shared co-authors 5

row(s) 1 - 30 of 30

Fiona S L Brinkman

Simon Fraser University

Co-authored papers 5

Lynn M Schriml

University of Maryland School of Medicine, Institute for Genome Sciences

Co-authored papers 2

Ruth E Timme

Center for Food Safety and Applied Nutrition, College Park

Co-authored papers 2

Ramona L Walls

Critical Path Institute

Co-authored papers 2

Jie Zheng

University of Pennsylvania Perelman School of Medicine

Co-authored papers 2

Pier Luigi Buttigieg

Alfred Wegener Institute

Co-authored papers 2

Christian J Stoeckert

Perelman School of Medicine, University of Pennsylvania

Co-authored papers 2

Randi Vita

Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology

Co-authored papers 2

James A Overton

Knocean Inc.

Co-authored papers 2

Bjoern Peters

University of Washington School of Medicine

Co-authored papers 2

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Co-authored papers 1

Seth Carbon

Lawrence Berkeley National Laboratory

Co-authored papers 1

Michelle Giglio

University of Maryland School of Medicine, Institute for Genome Sciences

Co-authored papers 1

Robert Hoehndorf

King Abdullah University of Science and Technology

Co-authored papers 1

Mathias Brochhausen

College of Medicine, University of Arkansas for Medical Sciences