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Author Details

Tsutomu Matsui
Stanford University
2003
49
20
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37147801An ensemble of cadherin-catenin-vinculin complex employs vinculin as the major F-actin binding mode.Biophys J2023
37121546Structural dynamics reveal subtype-specific activation and inhibition of influenza virus hemagglutinin.J Biol Chem2023
35065072Stabilization of glucose-6-phosphate dehydrogenase oligomers enhances catalytic activity and stability of clinical variants.J Biol Chem2022
36322416A round-robin approach provides a detailed assessment of biomolecular small-angle scattering data reproducibility and yields consensus curves for benchmarking.Acta Crystallogr D Struct Biol2022
33468660Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency.Proc Natl Acad Sci U S A2021
33683475Dynamics and stability in the maturation of a eukaryotic virus: a paradigm for chemically programmed large-scale macromolecular reorganization.Arch Virol2021
32786753Antibody Probes of Module 1 of the 6-Deoxyerythronolide B Synthase Reveal an Extended Conformation During Ketoreduction.J Am Chem Soc2020
31848245A bacterial surface layer protein exploits multistep crystallization for rapid self-assembly.Proc Natl Acad Sci U S A2020
31591245An ensemble of flexible conformations underlies mechanotransduction by the cadherin-catenin adhesion complex.Proc Natl Acad Sci U S A2019
31308519Structure of the full-length Clostridium difficile toxin B.Nat Struct Mol Biol2019
31189654Quaternary structure of α-amino-β-carboxymuconate-ϵ-semialdehyde decarboxylase (ACMSD) controls its activity.J Biol Chem2019
29762030Structure-Function Analysis of the Extended Conformation of a Polyketide Synthase Module.J Am Chem Soc2018
30037495α-Catenin Structure and Nanoscale Dynamics in Solution and in Complex with F-Actin.Biophys J2018
30354045De Novo Design and Implementation of a Tandem Acyl Carrier Protein Domain in a Type I Modular Polyketide Synthase.ACS Chem Biol2018
30420764Intrinsic disorder in the regulatory N-terminal domain of diacylglycerol acyltransferase 1 from Brassica napus.Sci Rep2018
30289692Discovery and Characterization of a Thioesterase-Specific Monoclonal Antibody That Recognizes the 6-Deoxyerythronolide B Synthase.Biochemistry2018
30560862A viral-fusion-peptide-like molecular switch drives membrane insertion of botulinum neurotoxin A1.Nat Commun2018
28858528Phospho-Priming Confers Functionally Relevant Specificities for Rad53 Kinase Autophosphorylation.Biochemistry2017
28471365Structural features of NS3 of Dengue virus serotypes 2 and 4 in solution and insight into RNA binding and the inhibitory role of quercetin.Acta Crystallogr D Struct Biol2017
28285124Controllable Activation of Nanoscale Dynamics in a Disordered Protein Alters Binding Kinetics.J Mol Biol2017
29263320Dynamic intramolecular regulation of the histone chaperone nucleoplasmin controls histone binding and release.Nat Commun2017
26968362Solution structure of an "open" E. coli Pol III clamp loader sliding clamp complex.J Struct Biol2016
26882199Structure of a Bacterial Virus DNA-Injection Protein Complex Reveals a Decameric Assembly with a Constricted Molecular Channel.PLoS One2016
26876100Selective Binding of AIRAPL Tandem UIMs to Lys48-Linked Tri-Ubiquitin Chains.Structure2016
25396748Nematic director reorientation at solid and liquid interfaces under flow: SAXS studies in a microfluidic device.Langmuir2015
26598179Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with αα Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence.Biochemistry2015
26529540Protein Arginine Methyltransferase 8: Tetrameric Structure and Protein Substrate Specificity.Biochemistry2015
26527147Structural insight and flexible features of NS5 proteins from all four serotypes of Dengue virus in solution.Acta Crystallogr D Biol Crystallogr2015
25615859The accurate assessment of small-angle X-ray scattering data.Acta Crystallogr D Biol Crystallogr2015
25577149An encapsidated viral protein and its role in RNA packaging by a non-enveloped animal RNA virus.Virology2015
24704088Architectures of whole-module and bimodular proteins from the 6-deoxyerythronolide B synthase.J Mol Biol2014
25240768Structural basis of the pH-dependent assembly of a botulinum neurotoxin complex.J Mol Biol2014
25383668Internal motions prime cIAP1 for rapid activation.Nat Struct Mol Biol2014
25139911Integrative structure-function mapping of the nucleoporin Nup133 suggests a conserved mechanism for membrane anchoring of the nuclear pore complex.Mol Cell Proteomics2014
24931470CD4-induced activation in a soluble HIV-1 Env trimer.Structure2014
23246781Dynamics in cryo EM reconstructions visualized with maximum-likelihood derived variance maps.J Struct Biol2013
23451136Structure of the arginine methyltransferase PRMT5-MEP50 reveals a mechanism for substrate specificity.PLoS One2013
23485419Virus assembly and maturation: auto-regulation through allosteric molecular switches.J Mol Biol2013
23499021Structure, dynamics, evolution, and function of a major scaffold component in the nuclear pore complex.Structure2013
23524290Structural study of hNck2 SH3 domain protein in solution by circular dichroism and X-ray solution scattering.Biophys Chem2013
22544723Atomic structure of the nuclear pore complex targeting domain of a Nup116 homologue from the yeast, Candida glabrata.Proteins2012
22761380Dissecting quasi-equivalence in nonenveloped viruses: membrane disruption is promoted by lytic peptides released from subunit pentamers, not hexamers.J Virol2012
20371334Balanced electrostatic and structural forces guide the large conformational change associated with maturation of T = 4 virus.Biophys J2010
20660783Subunits fold at position-dependent rates during maturation of a eukaryotic RNA virus.Proc Natl Acad Sci U S A2010
18987141Characterization of large conformational changes and autoproteolysis in the maturation of a T=4 virus capsid.J Virol2009
16611246Structural insight of human DEAD-box protein rck/p54 into its substrate recognition with conformational changes.Genes Cells2006
14684915Crystallization and X-ray analysis of the N-terminal core domain of a tumour-associated human DEAD-box RNA helicase, rck/p54.Acta Crystallogr D Biol Crystallogr2004
15502313Crystallization and preliminary X-ray crystallographic analysis of chitinase F1 (ChiF1) from the alkaliphilic Nocardiopsis sp. strain F96.Acta Crystallogr D Biol Crystallogr2004
12875652A tumour-associated DEAD-box protein, rck/p54 exhibits RNA unwinding activity toward c-myc RNAs in vitro.Genes Cells2003
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Collaborators

Thomas M Weiss
Stanford University
Co-authored papers 18
Steven C Almo
Albert Einstein College of Medicine
Co-authored papers 4
Anne Martel
Institut Laue-Langevin (ILL)
Co-authored papers 4
Lester G Carter
Stanford University
Co-authored papers 4
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 3
Seung Joong Kim
Korea Advanced Institute of Science and Technology (KAIST)
Co-authored papers 3
Subbiah Parthasarathy
New York University Grossman School of Medicine
Co-authored papers 3
Charles S Craik
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Co-authored papers 3
Natalia Sevillano
Department of Pharmaceutical Chemistry, University of California San Francisco
Co-authored papers 3
Jeffrey B Bonanno
Albert Einstein College of Medicine
Co-authored papers 3
J Michael Sauder
Eli Lilly and Co.
Co-authored papers 3
Stephen K Burley
The State University of New Jersey
Co-authored papers 3
Hiro Tsuruta
Stanford University
Co-authored papers 3
Michael P Rout
The Rockefeller University
Co-authored papers 3
Javier Fernandez-Martinez
The Rockefeller University
Co-authored papers 3
Michael Brenowitz
Albert Einstein College of Medicine
Co-authored papers 2
Ursula Pieper
University of California san francisco
Co-authored papers 2
Jeremy Phillips
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 2
Gabriel C Lander
The Scripps Research Institute
Co-authored papers 2
Kelly K Lee
University of Washington
Co-authored papers 2
Miklos Guttman
University of Washington
Co-authored papers 2
Florencia La Greca
Department of Pharmaceutical Chemistry , University of California san francisco
Co-authored papers 2
Jeremiah Gilmore
Co-authored papers 1
Ariel Stanhill
Open University of Israel
Co-authored papers 1
Patrice Vachette
Universite Paris-Saclay, CNRS, Institute for Integrative Biology of the Cell (I2BC)
Co-authored papers 1
Shane Atwell
Lilly Research Laboratories
Co-authored papers 1
Devon A Thompson
Stanford University
Co-authored papers 1
Jerome M Karp
New York University (NYU) Langone Health
Co-authored papers 1
Frank Gabel
University Grenoble Alpes, CNRS
Co-authored papers 1
Dmitri I Svergun
King's College London BHF Centre for Research Excellence
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Release 1.2