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Author Details

Edoardo Pasolli
University of Naples Federico II
2010
50
33
PMIDPaper TitleJournal TitlePublished Year
36653448The person-to-person transmission landscape of the gut and oral microbiomes.Nature2023
37705113Plastics shape the black soldier fly larvae gut microbiome and select for biodegrading functions.Microbiome2023
37883976Extension of the Segatella copri complex to 13 species with distinct large extrachromosomal elements and associations with host conditions.Cell Host Microbe2023
37116481Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population.Curr Biol2023
37141097MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice.Cell Rep2023
37370676Distinct Signatures of Tumor-Associated Microbiota and Metabolome in Low-Grade vs. High-Grade Dysplastic Colon Polyps: Inference of Their Role in Tumor Initiation and Progression.Cancers (Basel)2023
34315772Stool microRNA profiles reflect different dietary and gut microbiome patterns in healthy individuals.Gut2022
35446845Host phenotype classification from human microbiome data is mainly driven by the presence of microbial taxa.PLoS Comput Biol2022
36001607A Metabologenomic approach reveals alterations in the gut microbiota of a mouse model of Alzheimer's disease.PLoS One2022
35889831The Core Human Microbiome: Does It Exist and How Can We Find It? A Critical Review of the Concept.Nutrients2022
34930787Cancer Induces a Stress Ileopathy Depending on β-Adrenergic Receptors and Promoting Dysbiosis that Contributes to Carcinogenesis.Cancer Discov2022
34050328Prevotella diversity, niches and interactions with the human host.Nat Rev Microbiol2021
33500411Neonatal antibiotic exposure impairs child growth during the first six years of life by perturbing intestinal microbial colonization.Nat Commun2021
34645820Specific gut microbiome signatures and the associated pro-inflamatory functions are linked to pediatric allergy and acquisition of immune tolerance.Nat Commun2021
34789871Reporting guidelines for human microbiome research: the STORMS checklist.Nat Med2021
33963313Intestinal microbiota influences clinical outcome and side effects of early breast cancer treatment.Cell Death Differ2021
32451391Large-scale genome-wide analysis links lactic acid bacteria from food with the gut microbiome.Nat Commun2020
32075887Mediterranean diet intervention in overweight and obese subjects lowers plasma cholesterol and causes changes in the gut microbiome and metabolome independently of energy intake.Gut2020
33127901Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics.NPJ Biofilms Microbiomes2020
33065016Newly Explored Faecalibacterium Diversity Is Connected to Age, Lifestyle, Geography, and Disease.Curr Biol2020
32820119Cross-reactivity between tumor MHC class I-restricted antigens and an enterococcal bacteriophage.Science2020
32556166The food-gut axis: lactic acid bacteria and their link to food, the gut microbiome and human health.FEMS Microbiol Rev2020
32376136Gut Bacteria Composition Drives Primary Resistance to Cancer Immunotherapy in Renal Cell Carcinoma Patients.Eur Urol2020
32513234Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations.Genome Biol2020
32427907Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.Nat Commun2020
30661755Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle.Cell2019
31664237Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.Nat Med2019
31883524Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species.Genome Biol2019
31607556The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations.Cell Host Microbe2019
30799264Distinct Genetic and Functional Traits of Human Intestinal Prevotella copri Strains Are Associated with Different Habitual Diets.Cell Host Microbe2019
30936548Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.Nat Med2019
30901344Methicillin-resistant Staphylococcus aureus eradication in cystic fibrosis patients: A randomized multicenter study.PLoS One2019
30674352Genomic and metagenomic insights into the microbial community of a thermal spring.Microbiome2019
29437085Draft Genome Sequences of Novel <i>Pseudomonas</i>, <i>Flavobacterium</i>, and <i>Sediminibacterium</i> [corrected] Strains from a Freshwater Ecosystem.Genome Announc2018
30001517Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life.Cell Host Microbe2018
30001516Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome.Cell Host Microbe2018
30424799Whole-genome epidemiology, characterisation, and phylogenetic reconstruction of Staphylococcus aureus strains in a paediatric hospital.Genome Med2018
29519845Correction for Pinto et al., "Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Strains from a Freshwater Ecosystem".Genome Announc2018
29743119Profiling microbial strains in urban environments using metagenomic sequencing data.Biol Direct2018
28845461Large-Scale Phylogenomics of the <i>Lactobacillus casei</i> Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features.mSystems2017
28167665Microbial strain-level population structure and genetic diversity from metagenomes.Genome Res2017
29088129Accessible, curated metagenomic data through ExperimentHub.Nat Methods2017
29167244Draft Genome Sequence of the Planktic Cyanobacterium <i>Tychonema bourrellyi</i>, Isolated from Alpine Lentic Freshwater.Genome Announc2017
28651630Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission.Microbiome2017
28837129Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiome.ISME J2017
28649415Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis.NPJ Biofilms Microbiomes2017
26999001Strain-level microbial epidemiology and population genomics from shotgun metagenomics.Nat Methods2016
27400279Machine Learning Meta-analysis of Large Metagenomic Datasets: Tools and Biological Insights.PLoS Comput Biol2016
26418763MetaPhlAn2 for enhanced metagenomic taxonomic profiling.Nat Methods2015
21056938Active learning methods for electrocardiographic signal classification.IEEE Trans Inf Technol Biomed2010
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Broad Institute of MIT and Harvard
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King's College London
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Chemistry Institute, Universidade de Sao Paulo - USP
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