Skip to Main Content

Author Details

Martin C Frith
Artificial Intelligence Research Center, University of Tokyo
2001
92
38
PMIDPaper TitleJournal TitlePublished Year
38008286Cost-Effective Cas9-Mediated Targeted Sequencing of Spinocerebellar Ataxia Repeat Expansions.J Mol Diagn2024
38008286Cost-Effective Cas9-Mediated Targeted Sequencing of Spinocerebellar Ataxia Repeat Expansions.J Mol Diagn2024
36702468How to optimally sample a sequence for rapid analysis.Bioinformatics2023
35617174Improved DNA-Versus-Protein Homology Search for Protein Fossils.IEEE/ACM Trans Comput Biol Bioinform2023
38085182DNA Conserved in Diverse Animals Since the Precambrian Controls Genes for Embryonic Development.Mol Biol Evol2023
37286232Biallelic structural variations within <i>FGF12</i> detected by long-read sequencing in epilepsy.Life Sci Alliance2023
36818731An immune-suppressing protein in human endogenous retroviruses.Bioinform Adv2023
36702468How to optimally sample a sequence for rapid analysis.Bioinformatics2023
36941762A new layer of complexity in the human genome: Somatic recombination of repeat elements.Clin Transl Med2023
36781728Finding Rearrangements in Nanopore DNA Reads with LAST and dnarrange.Methods Mol Biol2023
36781727Analysis of Tandem Repeat Expansions Using Long DNA Reads.Methods Mol Biol2023
38085182DNA Conserved in Diverse Animals Since the Precambrian Controls Genes for Embryonic Development.Mol Biol Evol2023
35617174Improved DNA-Versus-Protein Homology Search for Protein Fossils.IEEE/ACM Trans Comput Biol Bioinform2023
37286232Biallelic structural variations within <i>FGF12</i> detected by long-read sequencing in epilepsy.Life Sci Alliance2023
36818731An immune-suppressing protein in human endogenous retroviruses.Bioinform Adv2023
36781728Finding Rearrangements in Nanopore DNA Reads with LAST and dnarrange.Methods Mol Biol2023
36781727Analysis of Tandem Repeat Expansions Using Long DNA Reads.Methods Mol Biol2023
36941762A new layer of complexity in the human genome: Somatic recombination of repeat elements.Clin Transl Med2023
35882231Recombination of repeat elements generates somatic complexity in human genomes.Cell2022
35882231Recombination of repeat elements generates somatic complexity in human genomes.Cell2022
33289891lamassemble: Multiple Alignment and Consensus Sequence of Long Reads.Methods Mol Biol2021
34078885Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.Nat Commun2021
33693858Significant non-existence of sequences in genomes and proteomes.Nucleic Acids Res2021
33510365Long-read whole-genome sequencing identified a partial MBD5 deletion in an exome-negative patient with neurodevelopmental disorder.J Hum Genet2021
33346833Minimally overlapping words for sequence similarity search.Bioinformatics2021
33289891lamassemble: Multiple Alignment and Consensus Sequence of Long Reads.Methods Mol Biol2021
33413375Genome-wide survey of tandem repeats by nanopore sequencing shows that disease-associated repeats are more polymorphic in the general population.BMC Med Genomics2021
33510365Long-read whole-genome sequencing identified a partial MBD5 deletion in an exome-negative patient with neurodevelopmental disorder.J Hum Genet2021
33693858Significant non-existence of sequences in genomes and proteomes.Nucleic Acids Res2021
34078885Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.Nat Commun2021
33346833Minimally overlapping words for sequence similarity search.Bioinformatics2021
33413375Genome-wide survey of tandem repeats by nanopore sequencing shows that disease-associated repeats are more polymorphic in the general population.BMC Med Genomics2021
32296131Long-read DNA sequencing fully characterized chromothripsis in a patient with Langer-Giedion syndrome and Cornelia de Lange syndrome-4.J Hum Genet2020
32066831Long-read sequencing identifies the pathogenic nucleotide repeat expansion in RFC1 in a Japanese case of CANVAS.J Hum Genet2020
32296131Long-read DNA sequencing fully characterized chromothripsis in a patient with Langer-Giedion syndrome and Cornelia de Lange syndrome-4.J Hum Genet2020
32731881A pipeline for complete characterization of complex germline rearrangements from long DNA reads.Genome Med2020
32066831Long-read sequencing identifies the pathogenic nucleotide repeat expansion in RFC1 in a Japanese case of CANVAS.J Hum Genet2020
32731881A pipeline for complete characterization of complex germline rearrangements from long DNA reads.Genome Med2020
30689855NanoPipe-a web server for nanopore MinION sequencing data analysis.Gigascience2019
30462165Evaluation and application of RNA-Seq by MinION.DNA Res2019
30689855NanoPipe-a web server for nanopore MinION sequencing data analysis.Gigascience2019
30890163Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads.Genome Biol2019
31332381Long-read sequencing identifies GGC repeat expansions in NOTCH2NLC associated with neuronal intranuclear inclusion disease.Nat Genet2019
31332381Long-read sequencing identifies GGC repeat expansions in NOTCH2NLC associated with neuronal intranuclear inclusion disease.Nat Genet2019
30890163Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads.Genome Biol2019
30462165Evaluation and application of RNA-Seq by MinION.DNA Res2019
29272440A survey of localized sequence rearrangements in human DNA.Nucleic Acids Res2018
29994365A Simplified Description of Child Tables for Sequence Similarity Search.IEEE/ACM Trans Comput Biol Bioinform2018
30412317Biallelic COLGALT1 variants are associated with cerebral small vessel disease.Ann Neurol2018
29272440A survey of localized sequence rearrangements in human DNA.Nucleic Acids Res2018
  • 1 - 50 of 184

Recommended Authors

Nozomu Yachie
The University of British Columbia
Career Start Year 2006
Number of shared co-authors 2
Daniel R Zerbino
European Bioinformatics Institute
Career Start Year 2005
Number of shared co-authors 2
Benedict Paten
UC Santa Cruz Genomics Institute, University of California
Career Start Year 2005
Number of shared co-authors 12
Carl Kingsford
Carnegie Mellon University
Career Start Year 2005
Number of shared co-authors 1
Gang Fang
Icahn School of Medicine at Mount Sinai
Career Start Year 2005
Number of shared co-authors 6
Michael C Schatz
Johns Hopkins University
Career Start Year 2004
Number of shared co-authors 7
Ryan E Mills
University of Michigan Medical School ann arbor
Career Start Year 2003
Number of shared co-authors 2
Valer Gotea
National Human Genome Research Institute, National Institutes of Health
Career Start Year 2003
Number of shared co-authors 2
Manolis Kellis
Massachusetts Institute of Technology
Career Start Year 2003
Number of shared co-authors 11
Katherine S Pollard
Gladstone Institutes
Career Start Year 2002
Number of shared co-authors 1
Suleyman Cenk Sahinalp
National Cancer Institute, National Institutes of Health
Career Start Year 2001
Number of shared co-authors 0
Can Alkan
Bilkent University
Career Start Year 2001
Number of shared co-authors 1
Michael Brudno
University of Toronto
Career Start Year 2000
Number of shared co-authors 8
Jeong-Hyeon Choi
National Marine Biodiversity Institute of Korea
Career Start Year 2000
Number of shared co-authors 3
Mark Diekhans
Genomics Institute, University of California Santa Cruz
Career Start Year 1999
Number of shared co-authors 11
Anton Nekrutenko
The Pennsylvania State University, University Park
Career Start Year 1998
Number of shared co-authors 1
Sarah J Wheelan
National Human Genome Research Institute, National Institutes of Health
Career Start Year 1998
Number of shared co-authors 6
Vineet Bafna
University of California San Diego
Career Start Year 1998
Number of shared co-authors 4
Ian Korf
University of California davis
Career Start Year 1998
Number of shared co-authors 11
Jeremy Buhler
Washington University in St. Louis
Career Start Year 1997
Number of shared co-authors 0
Terry Gaasterland
Scripps Institution of Oceanography, University of California San Diego
Career Start Year 1994
Number of shared co-authors 41
Lucinda Fulton
McDonnell Genome Institute, Washington University School of Medicine
Career Start Year 1994
Number of shared co-authors 10
Ewan Birney
European Bioinformatics Institute
Career Start Year 1992
Number of shared co-authors 62
Mark Gerstein
Yale University
Career Start Year 1991
Number of shared co-authors 21
LaDeana W Hillier
University of Washington
Career Start Year 1991
Number of shared co-authors 13
Roderic Guig??
Barcelona Institute of Science and Technology
Career Start Year 1990
Number of shared co-authors 29
Pavel A Pevzner
University of California
Career Start Year 1987
Number of shared co-authors 7
David Haussler
Genomics Institute, University of California Santa Cruz
Career Start Year 1986
Number of shared co-authors 15
Richard K Wilson
The Ohio State University
Career Start Year 1983
Number of shared co-authors 16
Richard Durbin
University of Cambridge
Career Start Year 1964
Number of shared co-authors 13

Collaborators

Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 17
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 17
Jun Kawai
RIKEN Center for Integrative Medical Sciences
Co-authored papers 13
Zhiping Weng
University of Massachusetts Medical School
Co-authored papers 11
Timothy L Bailey
Co-authored papers 9
Chikatoshi Kai
Co-authored papers 9
John S Mattick
Australia UNSW RNA Institute
Co-authored papers 8
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 7
Shintaro Katayama
Folkhalsan Research Center
Co-authored papers 7
Harukazu Suzuki
RIKEN Center for Integrative Medical Sciences
Co-authored papers 7
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 7
John L Spouge
Co-authored papers 6
Ulla Hansen
Co-authored papers 6
Ken C Pang
Co-authored papers 6
Timothy Ravasi
Okinawa Institute of Science and Technology Graduate University
Co-authored papers 6
David A Hume
Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 6
Albin Sandelin
University of Copenhagen
Co-authored papers 6
Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 5
Shiro Fukuda
Graduate School of Medicine, Osaka University
Co-authored papers 5
Masayoshi Itoh
RIKEN Center for Integrative Medical Sciences
Co-authored papers 5
Boris Lenhard
MRC London Institute of Medical Sciences
Co-authored papers 5
Christine A Wells
The University of Melbourne
Co-authored papers 5
Masaaki Furuno
RIKEN Center for Integrative Medical Sciences
Co-authored papers 5
Stefano Gustincich
Istituto Italiano di Tecnologia
Co-authored papers 4
Carol J Bult
The Jackson Laboratory Cancer Center
Co-authored papers 4
Vladimir B Bajic
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 4
Sean M Grimmond
The University of Melbourne
Co-authored papers 4
Sumio Sugano
Co-authored papers 4
Claes Wahlestedt
Co-authored papers 4
Yutaka Suzuki
Co-authored papers 4
Release 1.2