Author details

Full Name

Sophia Derdak

Affiliation

Medical University of Vienna

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37090735	The small molecule inhibitor BX-795 uncouples IL-2 production from inhibition of Th2 inflammation and induces CD4<sup>+</sup> T cells resembling iTreg.	Front Immunol	2023
37623854	Triple Therapy with Metformin, Ketogenic Diet, and Metronomic Cyclophosphamide Reduced Tumor Growth in MYCN-Amplified Neuroblastoma Xenografts.	Metabolites	2023
37564700	Nanopore sequencing unveils the complexity of the cold-activated murine brown adipose tissue transcriptome.	iScience	2023
34775384	Innate Immune Training with Bacterial Extracts Enhances Lung Macrophage Recruitment to Protect from Betacoronavirus Infection.	J Innate Immun	2022
35750138	Soluble TREM2 levels reflect the recruitment and expansion of TREM2<sup>+</sup> macrophages that localize to fibrotic areas and limit NASH.	J Hepatol	2022
35687120	The dsRBP Staufen2 governs RNP assembly of neuronal Argonaute proteins.	Nucleic Acids Res	2022
36611918	The SMARCD Family of SWI/SNF Accessory Proteins Is Involved in the Transcriptional Regulation of Androgen Receptor-Driven Genes and Plays a Role in Various Essential Processes of Prostate Cancer.	Cells	2022
36232414	Consequences of Autophagy Deletion on the Age-Related Changes in the Epidermal Lipidome of Mice.	Int J Mol Sci	2022
33046834	STAT3 in the dorsal raphe gates behavioural reactivity and regulates gene networks associated with psychopathology.	Mol Psychiatry	2021
33715236	The energy sensor AMPK orchestrates metabolic and translational adaptation in expanding T helper cells.	FASEB J	2021
33758366	The AP-1 transcription factors c-Jun and JunB are essential for CD8Î± conventional dendritic cell identity.	Cell Death Differ	2021
34653234	New genes involved in Angelman syndrome-like: Expanding the genetic spectrum.	PLoS One	2021
34161769	Pumilio2 and Staufen2 selectively balance the synaptic proteome.	Cell Rep	2021
34018016	LMO3 reprograms visceral adipocyte metabolism during obesity.	J Mol Med (Berl)	2021
34116064	An InÂ Vitro Model of Avian Skin Reveals Evolutionarily Conserved Transcriptional Regulation of Epidermal Barrier Formation.	J Invest Dermatol	2021
32319705	The TGF-b/SOX4 axis and ROS-driven autophagy co-mediate CD39 expression in regulatory T-cells.	FASEB J	2020
31707294	Lmo3 deficiency in the mouse is associated with alterations in mood-related behaviors and a depression-biased amygdala transcriptome.	Psychoneuroendocrinology	2020
32861746	Effects of pharmacological calcimimetics on colorectal cancer cells over-expressing the human calcium-sensing receptor.	Biochim Biophys Acta Mol Cell Res	2020
32214787	Exome sequencing identifies <i>PEX6</i> mutations in three cases diagnosed with Retinitis Pigmentosa and hearing impairment.	Mol Vis	2020
30700761	Clonal dynamics monitoring during clinical evolution in chronic lymphocytic leukaemia.	Sci Rep	2019
31882973	High degree of polyclonality hinders somatic mutation calling in lung brush samples of COPD cases and controls.	Sci Rep	2019
30548424	Identification of a de novo splicing variant in the Coffin-Siris gene, SMARCE1, in a patient with Angelman-like syndrome.	Mol Genet Genomic Med	2019
29396139	Rare germline copy number variants in colorectal cancer predisposition characterized by exome sequencing analysis.	J Genet Genomics	2018
28069605	Splenic diffuse red pulp small B-cell lymphoma displays increased expression of cyclin D3 and recurrent CCND3 mutations.	Blood	2017
28396363	Genomic and Molecular Screenings Identify Different Mechanisms for Acquired Resistance to MET Inhibitors in Lung Cancer Cells.	Mol Cancer Ther	2017
28947817	The utility of Next Generation Sequencing for molecular diagnostics in Rett syndrome.	Sci Rep	2017
28800606	Whole exome sequencing as a diagnostic tool for patients with ciliopathy-like phenotypes.	PLoS One	2017
27592799	Shared Oncogenic Pathways Implicated in Both Virus-Positive and UV-Induced Merkel Cell Carcinomas.	J Invest Dermatol	2017
27036198	Identification of genetic variation in the swine toll-like receptors and development of a porcine TLR genotyping array.	Genet Sel Evol	2016
27766601	Genetic Diversity and Population Structure of Rice Varieties Cultivated in Temperate Regions.	Rice (N Y)	2016
27964752	Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx.	Genome Biol	2016
27604134	Whole exome sequencing analysis reveals TRPV3 as a risk factor for cardioembolic stroke.	Thromb Haemost	2016
27566279	Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes.	BMC Genomics	2016
27346392	Genome sequence of the olive tree, Olea europaea.	Gigascience	2016
25775023	Colorectal adenomas contain multiple somatic mutations that do not coincide with synchronous adenocarcinoma specimens.	PLoS One	2015
26647970	A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing.	Nat Commun	2015
25861046	Correction: Colorectal adenomas contain multiple somatic mutations that do not coincide with synchronous adenocarcinoma specimens.	PLoS One	2015
25943197	Genomic characterization of mutant laboratory mouse strains by exome sequencing and annotation lift-over.	BMC Genomics	2015
24296945	Whole-exome sequencing in splenic marginal zone lymphoma reveals mutations in genes involved in marginal zone differentiation.	Leukemia	2014
25303088	Development and validation of a 20K single nucleotide polymorphism (SNP) whole genome genotyping array for apple (Malus Ã¿ domestica Borkh).	PLoS One	2014
19320940	Targeting of mTOR is associated with decreased growth and decreased VEGF expression in acute myeloid leukaemia cells.	Eur J Clin Invest	2009
18024796	Targeting of heat shock protein 32 (Hsp32)/heme oxygenase-1 (HO-1) in leukemic cells in chronic myeloid leukemia: a novel approach to overcome resistance against imatinib.	Blood	2008
18972530	Quantitative protein microarrays for time-resolved measurements of protein phosphorylation.	Proteomics	2008
17537846	General strategy for decoration of enveloped viruses with functionally active lipid-modified cytokines.	J Virol	2007
16189265	PKC412 inhibits in vitro growth of neoplastic human mast cells expressing the D816V-mutated variant of KIT: comparison with AMN107, imatinib, and cladribine (2CdA) and evaluation of cooperative drug effects.	Blood	2006
16753876	Evaluation of biologic activity of tryptase secreted from blast cells in acute myeloid leukemia.	Leuk Lymphoma	2006
16849647	The CML-related oncoprotein BCR/ABL induces expression of histidine decarboxylase (HDC) and the synthesis of histamine in leukemic cells.	Blood	2006
16924110	Direct stimulation of T lymphocytes by immunosomes: virus-like particles decorated with T cell receptor/CD3 ligands plus costimulatory molecules.	Proc Natl Acad Sci U S A	2006
15784722	Identification of mTOR as a novel bifunctional target in chronic myeloid leukemia: dissection of growth-inhibitory and VEGF-suppressive effects of rapamycin in leukemic cells.	FASEB J	2005
16230407	Low-level expression of proapoptotic Bcl-2-interacting mediator in leukemic cells in patients with chronic myeloid leukemia: role of BCR/ABL, characterization of underlying signaling pathways, and reexpression by novel pharmacologic compounds.	Cancer Res	2005

1 - 50 of 53

Hailiang Mei

Leiden University Medical Center

Career Start Year 2014

Number of shared co-authors 7

Tuo Zhang

Weill Cornell Medical College.

Career Start Year 2013

Number of shared co-authors 0

Riyue Bao

UPMC Hillman Cancer Center

Career Start Year 2007

Number of shared co-authors 1

Mark J Cowley

Children's Cancer Institute, Lowy Cancer Research Centre

Career Start Year 2006

Number of shared co-authors 13

Maggie Cam

Center for Cancer Research, National Cancer Institute, National Institutes of Health

Career Start Year 2005

Number of shared co-authors 1

Francesca Rizzo

University of Salerno and Genome Research Center for Health

Career Start Year 2004

Number of shared co-authors 0

Shintaro Katayama

Folkhalsan Research Center

Career Start Year 2003

Number of shared co-authors 3

Andrew V Kossenkov

The Wistar Institute

Career Start Year 2003

Number of shared co-authors 0

Michael Slifker

Fox Chase Cancer Center

Career Start Year 2002

Number of shared co-authors 0

Olivier Elemento

Meyer Cancer Center

Career Start Year 2002

Number of shared co-authors 3

Hans-J??rg Warnatz

Max Planck Institute for Molecular Genetics

Career Start Year 2002

Number of shared co-authors 19

Mikhail G Dozmorov

Virginia Commonwealth University

Career Start Year 2001

Number of shared co-authors 0

Vladimir Makarov

Center for Immunotherapy and Precision-Immuno-Oncology, Cleveland Clinic

Career Start Year 2001

Number of shared co-authors 0

Yan W Asmann

Mayo Clinic

Career Start Year 2000

Number of shared co-authors 0

Elia Stupka

Center for Omics Sciences, IRCCS San Raffaele Scientific Institute

Career Start Year 2000

Number of shared co-authors 4

David K Crossman

University of Alabama at Birmingham

Career Start Year 2000

Number of shared co-authors 0

Peter White

The Ohio State University

Career Start Year 2000

Number of shared co-authors 0

Shawn Levy

HudsonAlpha Institute for Biotechnology

Career Start Year 1999

Number of shared co-authors 1

Celine Lefebvre

The Scripps Research Institute

Career Start Year 1999

Number of shared co-authors 0

Jan Koster

Amsterdam University Medical Centers location AMC

Career Start Year 1999

Number of shared co-authors 19

Shannon K McWeeney

Oregon Health & Science University, University of California Berkeley

Career Start Year 1997

Number of shared co-authors 2

Lianbo Yu

The Ohio State University

Career Start Year 1997

Number of shared co-authors 1

Adrian M St??tz

St. Anna Children's Cancer Research Institute (CCRI)

Career Start Year 1997

Number of shared co-authors 21

Agnes Viale

Memorial Sloan Kettering Cancer Center

Career Start Year 1996

Number of shared co-authors 5

Francisco M De La Vega

Stanford University School of Medicine

Career Start Year 1991

Number of shared co-authors 7

Wenbin Wei

Sheffield Institute for Translational Neuroscience (SITraN), University of Sheffield

Career Start Year 1991

Number of shared co-authors 0

Shrikant Mane

Yale School of Medicine

Career Start Year 1989

Number of shared co-authors 4

Nir Hacohen

Broad Institute of MIT and Harvard

Career Start Year 1989

Number of shared co-authors 2

David J Adams

Wellcome Sanger Institute

Career Start Year 1980

Number of shared co-authors 29

Sean Davis

Johns Hopkins School of Medicine, National Cancer Institute, Princeton University, University of Colorado Anschutz Medical Campus, University of Pittsburgh, University of Washington

Career Start Year 1974

Number of shared co-authors 8

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