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Author Details

Alma L Burlingame
Department of Pharmaceutical Chemistry, University of California san francisco
1964
513
105
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36861967O-GlcNAc glycosylation orchestrates fate decision and niche function of bone marrow stromal progenitors.Elife2023
38014285Reversible histone deacetylase activity catalyzes lysine acylation.bioRxiv2023
37720016Contrastsing synaptic roles of MDGA1 and MDGA2.bioRxiv2023
37090555Non-specific recognition of histone modifications by H3K9bhb antibody.bioRxiv2023
37402368Targeted high-throughput mutagenesis of the human spliceosome reveals its in vivo operating principles.Mol Cell2023
36965390Characterization of the Ciguatoxin Profile in Fish Samples from the Eastern Atlantic Ocean using Capillary Liquid Chromatography-High Resolution Mass Spectrometry.Food Chem2023
36960533Capturing the hierarchically assorted modules of protein-protein interactions in the organized nucleome.Mol Plant2023
36642223Capture, Release, and Identification of Newly Synthesized Proteins for Improved Profiling of Functional Translatomes.Mol Cell Proteomics2023
36634736In-Cell Chemical Crosslinking Identifies Hotspots for SQSTM-1/p62-IκBα Interaction That Underscore a Critical Role of p62 in Limiting NF-κB Activation Through IκBα Stabilization.Mol Cell Proteomics2023
36945454Antibody-directed extracellular proximity biotinylation reveals Contactin-1 regulates axo-axonic innervation of axon initial segments.bioRxiv2023
36863607Chemical Genetic Identification of PKC Epsilon Substrates in Mouse Brain.Mol Cell Proteomics2023
36861967O-GlcNAc glycosylation orchestrates fate decision and niche function of bone marrow stromal progenitors.Elife2023
36660928Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics.Plant Cell2023
37485368Non-specific recognition of histone modifications by H3K9bhb antibody.iScience2023
37720016Contrastsing synaptic roles of MDGA1 and MDGA2.bioRxiv2023
38014285Reversible histone deacetylase activity catalyzes lysine acylation.bioRxiv2023
37485368Non-specific recognition of histone modifications by H3K9bhb antibody.iScience2023
37090555Non-specific recognition of histone modifications by H3K9bhb antibody.bioRxiv2023
36945454Antibody-directed extracellular proximity biotinylation reveals Contactin-1 regulates axo-axonic innervation of axon initial segments.bioRxiv2023
37402368Targeted high-throughput mutagenesis of the human spliceosome reveals its in vivo operating principles.Mol Cell2023
36965390Characterization of the Ciguatoxin Profile in Fish Samples from the Eastern Atlantic Ocean using Capillary Liquid Chromatography-High Resolution Mass Spectrometry.Food Chem2023
36960533Capturing the hierarchically assorted modules of protein-protein interactions in the organized nucleome.Mol Plant2023
36642223Capture, Release, and Identification of Newly Synthesized Proteins for Improved Profiling of Functional Translatomes.Mol Cell Proteomics2023
36634736In-Cell Chemical Crosslinking Identifies Hotspots for SQSTM-1/p62-IκBα Interaction That Underscore a Critical Role of p62 in Limiting NF-κB Activation Through IκBα Stabilization.Mol Cell Proteomics2023
36863607Chemical Genetic Identification of PKC Epsilon Substrates in Mouse Brain.Mol Cell Proteomics2023
36660928Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics.Plant Cell2023
34987108Hemin-Induced Death Models Hemorrhagic Stroke and Is a Variant of Classical Neuronal Ferroptosis.J Neurosci2022
35590003Reversible lysine-targeted probes reveal residence time-based kinase selectivity.Nat Chem Biol2022
35385697Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C.Immunity2022
35830826Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C.Immunity2022
35756531Covalent labeling of a chromatin reader domain using proximity-reactive cyclic peptides.Chem Sci2022
36123354A stem cell roadmap of ribosome heterogeneity reveals a function for RPL10A in mesoderm production.Nat Commun2022
36563140Regulation of eIF4E guides a unique translational program to control erythroid maturation.Sci Adv2022
34987108Hemin-Induced Death Models Hemorrhagic Stroke and Is a Variant of Classical Neuronal Ferroptosis.J Neurosci2022
35019702Comparative Proteomics of Coxiella like Endosymbionts (CLEs) in the Symbiotic Organs of Rhipicephalus sanguineus Ticks.Microbiol Spectr2022
35089788Modulating environmental signals to reveal mechanisms and vulnerabilities of cancer persisters.Sci Adv2022
35074918Disruption of MeCP2-TCF20 complex underlies distinct neurodevelopmental disorders.Proc Natl Acad Sci U S A2022
35830826Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C.Immunity2022
35756531Covalent labeling of a chromatin reader domain using proximity-reactive cyclic peptides.Chem Sci2022
35590003Reversible lysine-targeted probes reveal residence time-based kinase selectivity.Nat Chem Biol2022
35385697Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C.Immunity2022
36563140Regulation of eIF4E guides a unique translational program to control erythroid maturation.Sci Adv2022
36123354A stem cell roadmap of ribosome heterogeneity reveals a function for RPL10A in mesoderm production.Nat Commun2022
35074918Disruption of MeCP2-TCF20 complex underlies distinct neurodevelopmental disorders.Proc Natl Acad Sci U S A2022
35089788Modulating environmental signals to reveal mechanisms and vulnerabilities of cancer persisters.Sci Adv2022
35019702Comparative Proteomics of Coxiella like Endosymbionts (CLEs) in the Symbiotic Organs of Rhipicephalus sanguineus Ticks.Microbiol Spectr2022
34168225Low-density lipoprotein receptor-related protein 1 (LRP1) is a novel receptor for apolipoprotein A4 (APOA4) in adipose tissue.Sci Rep2021
34180393Ankyrin-R regulates fast-spiking interneuron excitability through perineuronal nets and Kv3.1b K<sup>+</sup> channels.Elife2021
34168225Low-density lipoprotein receptor-related protein 1 (LRP1) is a novel receptor for apolipoprotein A4 (APOA4) in adipose tissue.Sci Rep2021
33574257Arabidopsis ACINUS is O-glycosylated and regulates transcription and alternative splicing of regulators of reproductive transitions.Nat Commun2021
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Collaborators

Juan A Oses-Prieto
Co-authored papers 80
Robert J Chalkley
Department of Pharmaceutical Chemistry, University of California at San Francisco
Co-authored papers 58
Jonathan C Trinidad
Indiana University
Co-authored papers 27
Lan Huang
University of California Irvine
Co-authored papers 25
Kathy H Li
West China Hospital, Sichuan University
Co-authored papers 21
Michael J Trnka
Department of Pharmaceutical Chemistry, University of California San Francisco
Co-authored papers 21
Kevan M Shokat
University of California San Francisco
Co-authored papers 21
David A Maltby
The University of Sydney
Co-authored papers 20
Ralph A Bradshaw
Co-authored papers 14
Feixia Chu
University of New Hampshire
Co-authored papers 13
Kirk C Hansen
University of Colorado Anschutz Medical Campus
Co-authored papers 11
Xin Zhang
Co-authored papers 10
Connie R Jimenez
Co-authored papers 9
Ralf Schoepfer
Center for Molecular Biology
Co-authored papers 9
Charles S Craik
Department of Pharmaceutical Chemistry, University of California san francisco
Co-authored papers 9
Karl R Clauser
Co-authored papers 8
Agnes Thalhammer
University of Trieste
Co-authored papers 8
Stanley B Prusiner
Weill Institute for Neurosciences, University of California San Francisco
Co-authored papers 8
Susan J Fisher
University of California San Francisco
Co-authored papers 7
Geeta J Narlikar
University of California san francisco
Co-authored papers 7
Kerry-Anne Rye
Co-authored papers 7
Bradford W Gibson
The Buck Institute for Research on Aging
Co-authored papers 7
Philip J Robinson
College of Medical Veterinary and Life Sciences, University of Glasgow
Co-authored papers 6
Frank McCormick
Frederick National Laboratory for Cancer Research
Co-authored papers 6
James A Wells
Department of Pharmaceutical Chemistry, University of California San Francisco
Co-authored papers 6
Jonathan B Johnston
Department of Pharmaceutical Chemistry, University of California san francisco
Co-authored papers 6
Steven A Carr
Broad Institute of MIT and Harvard
Co-authored papers 6
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 6
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 6
Ruedi Aebersold
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 5
Release 1.2