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Author Details

Ariel Rokem
University of Washington, Department of Psychology and eScience Institute
2006
70
31
PMIDPaper TitleJournal TitlePublished Year
37744469The Past, Present, and Future of the Brain Imaging Data Structure (BIDS).ArXiv2024
36896869Optic radiations representing different eccentricities age differently.Hum Brain Mapp2023
38078207Non-Stationary Dynamic Mode Decomposition.IEEE Access2023
37549280Human white matter myelinates faster in utero than ex utero.Proc Natl Acad Sci U S A2023
37609201Non-Stationary Dynamic Mode Decomposition.bioRxiv2023
37117243Author Correction: An analysis-ready and quality controlled resource for pediatric brain white-matter research.Sci Data2023
36798201Explainable Machine Learning Predictions of Perceptual Sensitivity for Retinal Prostheses.medRxiv2023
36224186An analysis-ready and quality controlled resource for pediatric brain white-matter research.Sci Data2022
36090266Factors affecting two-point discrimination in Argus II patients.Front Neurosci2022
33945818Automated Detection of Glaucoma With Interpretable Machine Learning Using Clinical Data and Multimodal Retinal Images.Am J Ophthalmol2021
35812695Groupyr: Sparse Group Lasso in Python.J Open Source Softw2021
33932337Brainhack: Developing a culture of open, inclusive, community-driven neuroscience.Neuron2021
34975382Bifurcated Topological Optimization for IVIM.Front Neurosci2021
34487405Development of the visual white matter pathways mediates development of electrophysiological responses in visual cortex.Hum Brain Mapp2021
34724000Numerical uncertainty in analytical pipelines lead to impactful variability in brain networks.PLoS One2021
34155395QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data.Nat Methods2021
34349631Diffusional Kurtosis Imaging in the Diffusion Imaging in Python Project.Front Hum Neurosci2021
34181648Multidimensional analysis and detection of informative features in human brain white matter.PLoS Comput Biol2021
34237442On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: Chronicles of the MEMENTO challenge.Neuroimage2021
31560268Slow Endogenous Fluctuations in Cortical fMRI Signals Correlate with Reduced Performance in a Visual Detection Task and Are Suppressed by Spatial Attention.J Cogn Neurosci2020
33252656Fractional ridge regression: a fast, interpretable reparameterization of ridge regression.Gigascience2020
33051471Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations.Sci Rep2020
30684636Generalized diffusion spectrum magnetic resonance imaging (GDSI) for model-free reconstruction of the ensemble average propagator.Neuroimage2019
35373219Model-Based Recommendations for Optimal Surgical Placement of Epiretinal Implants.Med Image Comput Comput Assist Interv2019
31235711A model of ganglion axon pathways accounts for percepts elicited by retinal implants.Sci Rep2019
31431940diff_classifier: Parallelization of multi-particle tracking video analyses.J Open Source Softw2019
30952891Generating retinal flow maps from structural optical coherence tomography with artificial intelligence.Sci Rep2019
30951547Forecasting future Humphrey Visual Fields using deep learning.PLoS One2019
31139070Combining Citizen Science and Deep Learning to Amplify Expertise in Neuroimaging.Front Neuroinform2019
31106944Evaluating arcuate fasciculus laterality measurements across dataset and tractography pipelines.Hum Brain Mapp2019
30927705Applying microstructural models to understand the role of white matter in cognitive development.Dev Cogn Neurosci2019
29507333A browser-based tool for visualization and analysis of diffusion MRI data.Nat Commun2018
32704456Journal of Open Source Software (JOSS): design and first-year review.PeerJ Prepr2018
30127025Hack weeks as a model for data science education and collaboration.Proc Natl Acad Sci U S A2018
29884784Rapid and widespread white matter plasticity during an intensive reading intervention.Nat Commun2018
28717579Deep-learning based, automated segmentation of macular edema in optical coherence tomography.Biomed Opt Express2017
28196374The visual white matter: The application of diffusion MRI and fiber tractography to vision science.J Vis2017
29254494Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework.Genome Med2017
29263301Fully automated, deep learning segmentation of oxygen-induced retinopathy images.JCI Insight2017
28643354Diffusion MRI microstructure models with in vivo human brain Connectome data: results from a multi-group comparison.NMR Biomed2017
28612755Learning to see again: biological constraints on cortical plasticity and the implications for sight restoration technologies.J Neural Eng2017
25828567A Major Human White Matter Pathway Between Dorsal and Ventral Visual Cortex.Cereb Cortex2016
27273015Evaluating quantitative proton-density-mapping methods.Hum Brain Mapp2016
27326542The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments.Sci Data2016
27042293Brainhack: a collaborative workshop for the open neuroscience community.Gigascience2016
26762670Q-space truncation and sampling in diffusion spectrum imaging.Magn Reson Med2016
25879933Evaluating the accuracy of diffusion MRI models in white matter.PLoS One2015
26485034Human blindsight is mediated by an intact geniculo-extrastriate pathway.Elife2015
26394229Correction: Evaluating the Accuracy of Diffusion MRI Models in White Matter.PLoS One2015
24141074Sex differences in sleep-dependent perceptual learning.Vision Res2014
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Collaborators

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Harvard University, Moorfields Eye Hospital NHS Foundation Trust, St. John's Mercy Hospital, University of British Columbia, University of Washington, Washington University in Saint Louis
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Universite Paris Saclay
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Boston University, Harvard Medical School, Kent Ridge Digital Laboratories, Massachusetts Institute of Technology, National University of Singapore
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Nathan S Kline Institute for Psychiatric Research, USA Child Mind Institute
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McGill University
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The University of Texas at Austin.
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University of Washington
Co-authored papers 3
Department of Psychology and Center for Neural Science, New York University.
Co-authored papers 3
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Weill Institute for Neurosciences, University of California san francisco
Co-authored papers 3
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Brigham and Women's Hospital, Mass General Brigham/Harvard Medical School
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