Author details

Full Name

Antonio Jimeno Yepes

Affiliation

ORCID

Career Start Year

2008

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36721225	Classifying literature mentions of biological pathogens as experimentally studied using natural language processing.	J Biomed Semantics	2023
36722350	Automating Quality Assessment of Medical Evidence in Systematic Reviews: Model Development and Validation Study.	J Med Internet Res	2023
34524944	A MultiCenter Analysis of Factors Associated with Hearing Outcome for 2,735 Adults with Cochlear Implants.	Trends in hearing	2021
33107905	A representation model for biological entities by fusing structured axioms with unstructured texts.		2021
34903103	Predictive models for cochlear implant outcomes: Performance, generalizability, and the impact of cohort size.	Trends in hearing	2021
31350561	BioNorm: deep learning-based event normalization for the curation of reaction databases.		2020
32119094	Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms.	JAMA Netw Open	2020
32385840	Combining Social Media and FDA Adverse Event Reporting System to Detect Adverse Drug Reactions.	Drug Safety	2020
30815103	A hybrid approach for automated mutation annotation of the extended human mutation landscape in scientific literature.	AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium	2018
29980491	Stage-based Variation in the Effect of Primary Tumor Side on All Stages of Colorectal Cancer Recurrence and Survival.		2018
29399672	Knowledge-Based Biomedical Word Sense Disambiguation with Neural Concept Embeddings	Proc IEEE Int Symp Bioinformatics Bioeng	2017
28797709	Word embeddings and recurrent neural networks based on Long-Short Term Memory nodes in supervised biomedical word sense disambiguation.	Journal of Biomedical Informatics	2017
29854190	Detection of Adverse Drug Reactions using Medical Named Entities on Twitter.	AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium	2017
26262130	Identifying Diseases, Drugs, and Symptoms in Twitter.		2015
25887792	Feature engineering for MEDLINE citation categorization with MeSH.	BMC Bioinformatics	2015
25510606	Knowledge based word-concept model estimation and refinement for biomedical text mining.	Journal of Biomedical Informatics	2015
24520105	Literature mining of genetic variants for curation: quantifying the importance of supplementary material.	Database (Oxford)	2014
25374782	Associating disease-related genetic variants in intergenic regions to the genes they impact.	PeerJ	2014
24980129	BioC interoperability track overview.	Database (Oxford)	2014
24551371	Comparison and combination of several MeSH indexing approaches.	AMIA Annu Symp Proc	2013
24034148	Monitoring named entity recognition: the League Table.	J Biomed Semantics	2013
24112383	Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources.	J Biomed Semantics	2013
23802936	MeSH indexing based on automatically generated summaries.	BMC Bioinformatics	2013
23640984	PCorral--interactive mining of protein interactions from MEDLINE.	Database (Oxford)	2013
23631733	Combining MEDLINE and publisher data to create parallel corpora for the automatic translation of biomedical text.	BMC Bioinformatics	2013
23584833	Annotating the biomedical literature for the human variome.	Database (Oxford)	2013
23725347	GeneRIF indexing: sentence selection based on machine learning.	BMC Bioinformatics	2013
21635749	Exploiting MeSH indexing in MEDLINE to generate a data set for word sense disambiguation.	BMC Bioinformatics	2011
22195224	A bottom-up approach to MEDLINE indexing recommendations.	AMIA Annu Symp Proc	2011
22166494	Assessment of NER solutions against the first and second CALBC Silver Standard Corpus.	J Biomed Semantics	2011
21658291	Collocation analysis for UMLS knowledge-based word sense disambiguation.	BMC Bioinformatics	2011
21871110	Studying the correlation between different word sense disambiguation methods and summarization effectiveness in biomedical texts.	BMC Bioinformatics	2011
20183881	CALBC silver standard corpus.	J Bioinform Comput Biol	2010
21092226	Knowledge-based biomedical word sense disambiguation: comparison of approaches.	BMC Bioinformatics	2010
19818874	Measuring prediction capacity of individual verbs for the identification of protein interactions.	J Biomed Inform	2010
19964204	Exploitation of ontological resources for scientific literature analysis: searching genes and related diseases.	Annu Int Conf IEEE Eng Med Biol Soc	2009
19796401	Reuse of terminological resources for efficient ontological engineering in Life Sciences.	BMC Bioinformatics	2009
19758468	Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb.	BMC Bioinformatics	2009
18437221	Combining evidence, specificity, and proximity towards the normalization of Gene Ontology terms in text.	EURASIP J Bioinform Syst Biol	2008