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Author Details

Toshimichi Fujiwara
Institute for Protein Research, Osaka University
1983
108
22
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36468685Real-time monitoring of enzyme-catalyzed phosphoribosylation of anti-influenza prodrug favipiravir by time-lapse nuclear magnetic resonance spectroscopy.NMR Biomed2023
37461319FUS regulates RAN translation through modulating the G-quadruplex structure of GGGGCC repeat RNA in <i>C9orf72</i>-linked ALS/FTD.Elife2023
37401781Protein-Ligand Interaction Analyses with Nuclear Magnetic Resonance Spectroscopy Enhanced by Dissolution Triplet Dynamic Nuclear Polarization.J Phys Chem Lett2023
37400653Exploration of novel αβ-protein folds through de novo design.Nat Struct Mol Biol2023
36478084Biological Magnetic Resonance Data Bank.Nucleic Acids Res2023
34664328Protein Data Bank Japan: Celebrating our 20th anniversary during a global pandemic as the Asian hub of three dimensional macromolecular structural data.Protein Sci2022
35616778<sup>1</sup>H, <sup>13</sup>C, and <sup>15</sup>N resonance assignments of human glutathione peroxidase 4.Biomol NMR Assign2022
35804047Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition.Sci Rep2022
35577789Cooperative regulation of PBI1 and MAPKs controls WRKY45 transcription factor in rice immunity.Nat Commun2022
35500664Evolution of α-synuclein conformation ensemble toward amyloid fibril via liquid-liquid phase separation (LLPS) as investigated by dynamic nuclear polarization-enhanced solid-state MAS NMR.Neurochem Int2022
35905443Chemical Conformation of the Essential Glutamate Site of the <i>c</i>-Ring within Thermophilic <i>Bacillus</i> F<sub>o</sub>F<sub>1</sub>-ATP Synthase Determined by Solid-State NMR Based on its Isolated <i>c</i>-Ring Structure.J Am Chem Soc2022
36324497<sup>19</sup>F chemical library and <sup>19</sup>F-NMR for a weakly bound complex structure.RSC Med Chem2022
36288411Multifunctional chemical inhibitors of the florigen activation complex discovered by structure-based high-throughput screening.Plant J2022
34954861Biochemical propensity mapping for structural and functional anatomy of importin α IBB domain.Genes Cells2022
34906540A hybrid strategy combining solution NMR spectroscopy and isothermal titration calorimetry to characterize protein-nanodisc interaction.Anal Biochem2022
33429348Temperature- and composition-dependent conformational transitions of amphipathic peptide-phospholipid nanodiscs.J Colloid Interface Sci2021
33620367Efficiency analysis of helium-cooled MAS DNP: case studies of surface-modified nanoparticles and homogeneous small-molecule solutions.Phys Chem Chem Phys2021
34302308Peptide Cyclization Mediated by Metal-Free S-Arylation: S-Protected Cysteine Sulfoxide as an Umpolung of the Cysteine Nucleophile.Chemistry2021
34312846Sequence requirements of the FFAT-like motif for specific binding to VAP-A are revealed by NMR.FEBS Lett2021
34139556Structural dynamics of the chromo-shadow domain and chromodomain of HP1 bound to histone H3K9 methylated peptide, as measured by site-directed spin-labeling EPR spectroscopy.Biochem Biophys Res Commun2021
34046949Polyphenol-solubility alters amyloid fibril formation of α-synuclein.Protein Sci2021
33285399Sensitivity enhancement by sequential data acquisition for <sup>13</sup>C-direct detection NMR.J Magn Reson2021
32516957Gadolinium Complexes as Contrast Agent for Cellular NMR Spectroscopy.Int J Mol Sci2020
31647140The Route from the Folded to the Amyloid State: Exploring the Potential Energy Surface of a Drug-Like Miniprotein.Chemistry2020
31961031The Route from the Folded to the Amyloid State: Exploring the Potential Energy Surface of a Drug-Like Miniprotein.Chemistry2020
32051433In-cell NMR as a sensitive tool to monitor physiological condition of Escherichia coli.Sci Rep2020
32006287BioMagResBank (BMRB) as a Resource for Structural Biology.Methods Mol Biol2020
33229587Robust folding of a de novo designed ideal protein even with most of the core mutated to valine.Proc Natl Acad Sci U S A2020
30849736Absolute <sup>1</sup>H polarization measurement with a spin-correlated component of magnetization by hyperpolarized MAS-DNP solid-state NMR.Solid State Nucl Magn Reson2019
31310506Diverse Structural Conversion and Aggregation Pathways of Alzheimer's Amyloid-β (1-40).ACS Nano2019
31226489Structural characterization of the N-terminal kinase-interacting domain of an Hsp90-cochaperone Cdc37 by CD and solution NMR spectroscopy.Biochim Biophys Acta Proteins Proteom2019
28815765New tools and functions in data-out activities at Protein Data Bank Japan (PDBj).Protein Sci2018
30125342A novel chitin-binding mode of the chitin-binding domain of chitinase A1 from Bacillus circulans WL-12 revealed by solid-state NMR.FEBS Lett2018
29985974Noise peak filtering in multi-dimensional NMR spectra using convolutional neural networks.Bioinformatics2018
29848549Phosphoinositide binding by the PH domain in ceramide transfer protein (CERT) is inhibited by hyperphosphorylation of an adjacent serine-repeat motif.J Biol Chem2018
29924600Amino Acid Selective <sup>13</sup>C Labeling and <sup>13</sup>C Scrambling Profile Analysis of Protein α and Side-Chain Carbons in Escherichia coli Utilized for Protein Nuclear Magnetic Resonance.Biochemistry2018
30271940Transient antibody-antigen interactions mediate the strain-specific recognition of a conserved malaria epitope.Commun Biol2018
30389410Veratridine binding to a transmembrane helix of sodium channel Na<sub>v</sub>1.4 determined by solid-state NMR.Bioorg Med Chem2018
30309334The relationship between dispositional empathy, psychological distress, and posttraumatic stress responses among Japanese uniformed disaster workers: a cross-sectional study.BMC Psychiatry2018
29329228Current NMR Techniques for Structure-Based Drug Discovery.Molecules2018
29197977Direct assignment of <sup>13</sup>C solid-state NMR signals of TF<sub>o</sub>F<sub>1</sub> ATP synthase subunit c-ring in lipid membranes and its implication for the ring structure.J Biomol NMR2018
28756478Protein <sup>19</sup>F-labeling using transglutaminase for the NMR study of intermolecular interactions.J Biomol NMR2017
31457628Nanodisc-to-Nanofiber Transition of Noncovalent Peptide-Phospholipid Assemblies.ACS Omega2017
28487762Modern Technologies of Solution Nuclear Magnetic Resonance Spectroscopy for Three-dimensional Structure Determination of Proteins Open Avenues for Life Scientists.Comput Struct Biotechnol J2017
28470617Cold-Shock Expression System in E. coli for Protein NMR Studies.Methods Mol Biol2017
28322271Mechanistic and structural basis of bioengineered bovine Cathelicidin-5 with optimized therapeutic activity.Sci Rep2017
26920836Advanced instrumentation for DNP-enhanced MAS NMR for higher magnetic fields and lower temperatures.J Magn Reson2016
27901172Conformational states of HAMP domains interacting with sensory rhodopsin membrane systems: an integrated all-atom and coarse-grained molecular dynamics simulation approach.Mol Biosyst2016
27927232Publication of nuclear magnetic resonance experimental data with semantic web technology and the application thereof to biomedical research of proteins.J Biomed Semantics2016
27303902Plant-specific DUF1110 protein from Oryza sativa: expression, purification and crystallization.Acta Crystallogr F Struct Biol Commun2016
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Collaborators

Hideo Akutsu
Institute for Protein Research, Osaka University, Yokohama City University
Co-authored papers 43
John L Markley
University of Wisconsin-Madison
Co-authored papers 4
Jeffrey C Hoch
University of Connecticut Health Center
Co-authored papers 3
Genji Kurisu
Institute for Protein Research, Osaka University
Co-authored papers 3
Eldon L Ulrich
University of Wisconsin-Madison
Co-authored papers 3
Michael R Gryk
University of Illinois
Co-authored papers 2
Haruki Nakamura
Institute for Protein Research, Osaka University
Co-authored papers 2
Shigeyuki Yokoyama
Shinshu University School of Medicine
Co-authored papers 2
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 1
David A Case
Rutgers University
Co-authored papers 1
Oliver F Lange
Center for Integrated Protein Science, Technische Universitat Munchen
Co-authored papers 1
Gordon C K Roberts
Leicester Institute of Structural and Chemical Biology, University of Leicester
Co-authored papers 1
Josep Rizo
University of Texas Southwestern Medical Center
Co-authored papers 1
Mike P Williamson
The University of Sheffield
Co-authored papers 1
Lu-Yun Lian
Institute of Systems, The University of Liverpool
Co-authored papers 1
Igor L Barsukov
Institute of Integrative Biology, University of Liverpool
Co-authored papers 1
David E Shaw
Columbia University
Co-authored papers 1
Masayori Inouye
Robert Wood Johnson Medical School, Rutgers University
Co-authored papers 1
Ad Bax
National Institutes of Health
Co-authored papers 1
Patrick C A van der Wel
Zernike Institute for Advanced Materials, University of Groningen
Co-authored papers 1
David Middleton
Co-authored papers 1
Ioannis Vakonakis
University of Oxford
Co-authored papers 1
Thomas A Frenkiel
The Medical Research Council Biomedical NMR Centre, The Francis Crick Institute
Co-authored papers 1
Ernest D Laue
University of Cambridge
Co-authored papers 1
Gordon S Rule
Carnegie Mellon University
Co-authored papers 1
Stephen Matthews
Imperial College London
Co-authored papers 1
Tania F Gendron
Co-authored papers 1
Chien Ho
Carnegie Mellon University
Co-authored papers 1
Pei Tang
Sichuan University
Co-authored papers 1
Joern Werner
Co-authored papers 1
Release 1.2