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Author Details

Marc Robinson-Rechavi
University of Lausanne
1997
129
44
PMIDPaper TitleJournal TitlePublished Year
36758078Genome structures resolve the early diversification of teleost fishes.Science2023
36758078Genome structures resolve the early diversification of teleost fishes.Science2023
35196080Convergent consequences of parthenogenesis on stick insect genomes.Sci Adv2022
36097541Bio-SODA UX: enabling natural language question answering over knowledge graphs with user disambiguation.Distrib Parallel Databases2022
35581477Dynamics of sex-biased gene expression during development in the stick insect Timema californicum.Heredity (Edinb)2022
36095022Rhythmicity is linked to expression cost at the protein level but to expression precision at the mRNA level.PLoS Comput Biol2022
35429227An ancient truncated duplication of the anti-Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family.Mol Ecol Resour2022
35933721X chromosomes show relaxed selection and complete somatic dosage compensation across Timema stick insect species.J Evol Biol2022
36401278Parallel evolution of amphioxus and vertebrate small-scale gene duplications.Genome Biol2022
37589308Lessons learned to boost a bioinformatics knowledge base reusability, the Bgee experience.Gigascience2022
34983844Convergent evolution of venom gland transcriptomes across Metazoa.Proc Natl Acad Sci U S A2022
35196080Convergent consequences of parthenogenesis on stick insect genomes.Sci Adv2022
37589308Lessons learned to boost a bioinformatics knowledge base reusability, the Bgee experience.Gigascience2022
35581477Dynamics of sex-biased gene expression during development in the stick insect Timema californicum.Heredity (Edinb)2022
35429227An ancient truncated duplication of the anti-Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family.Mol Ecol Resour2022
36401278Parallel evolution of amphioxus and vertebrate small-scale gene duplications.Genome Biol2022
35933721X chromosomes show relaxed selection and complete somatic dosage compensation across Timema stick insect species.J Evol Biol2022
36097541Bio-SODA UX: enabling natural language question answering over knowledge graphs with user disambiguation.Distrib Parallel Databases2022
36095022Rhythmicity is linked to expression cost at the protein level but to expression precision at the mRNA level.PLoS Comput Biol2022
34983844Convergent evolution of venom gland transcriptomes across Metazoa.Proc Natl Acad Sci U S A2022
33037820The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals.Nucleic Acids Res2021
33591306First annotated draft genomes of nonmarine ostracods (Ostracoda, Crustacea) with different reproductive modes.G3 (Bethesda)2021
33787851OMAmer: tree-driven and alignment-free protein assignment to subfamilies outperforms closest sequence approaches.Bioinformatics2021
34266978The hourglass model of evolutionary conservation during embryogenesis extends to developmental enhancers with signatures of positive selection.Genome Res2021
33037820The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals.Nucleic Acids Res2021
33169790Special Care Is Needed in Applying Phylogenetic Comparative Methods to Gene Trees with Speciation and Duplication Nodes.Mol Biol Evol2021
34535550Haplotype divergence supports long-term asexuality in the oribatid mite <i>Oppiella nova</i>.Proc Natl Acad Sci U S A2021
33787851OMAmer: tree-driven and alignment-free protein assignment to subfamilies outperforms closest sequence approaches.Bioinformatics2021
33591306First annotated draft genomes of nonmarine ostracods (Ostracoda, Crustacea) with different reproductive modes.G3 (Bethesda)2021
34535550Haplotype divergence supports long-term asexuality in the oribatid mite <i>Oppiella nova</i>.Proc Natl Acad Sci U S A2021
34266978The hourglass model of evolutionary conservation during embryogenesis extends to developmental enhancers with signatures of positive selection.Genome Res2021
33169790Special Care Is Needed in Applying Phylogenetic Comparative Methods to Gene Trees with Speciation and Duplication Nodes.Mol Biol Evol2021
32434468Correction to: Sex-specific changes in gene expression in response to estrogen pollution around the onset of sex differentiation in grayling (Salmonidae).BMC Genomics2020
32434468Correction to: Sex-specific changes in gene expression in response to estrogen pollution around the onset of sex differentiation in grayling (Salmonidae).BMC Genomics2020
32182235Methods detecting rhythmic gene expression are biologically relevant only for strong signal.PLoS Comput Biol2020
32652120Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases.Genomics Proteomics Bioinformatics2020
33246961Robust inference of positive selection on regulatory sequences in the human brain.Sci Adv2020
32633783Single-cell transcriptomics allows novel insights into aging and circadian processes.Brief Funct Genomics2020
32950053Inter-embryo gene expression variability recapitulates the hourglass pattern of evo-devo.BMC Biol2020
33246961Robust inference of positive selection on regulatory sequences in the human brain.Sci Adv2020
32633783Single-cell transcriptomics allows novel insights into aging and circadian processes.Brief Funct Genomics2020
32652120Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases.Genomics Proteomics Bioinformatics2020
32950053Inter-embryo gene expression variability recapitulates the hourglass pattern of evo-devo.BMC Biol2020
32182235Methods detecting rhythmic gene expression are biologically relevant only for strong signal.PLoS Comput Biol2020
30445505Repeated Evolution of Asexuality Involves Convergent Gene Expression Changes.Mol Biol Evol2019
31697362Enabling semantic queries across federated bioinformatics databases.Database (Oxford)2019
31754022Identifying gene function and module connections by the integration of multispecies expression compendia.Genome Res2019
31604947Sex-biased gene expression is repeatedly masculinized in asexual females.Nat Commun2019
30445505Repeated Evolution of Asexuality Involves Convergent Gene Expression Changes.Mol Biol Evol2019
30864192Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5.Mol Ecol2019
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Collaborators

Vincent Laudet
Okinawa Institute of Science and Technology
Co-authored papers 24
Julien Roux
Karolinska Institutet
Co-authored papers 16
Frederic B Bastian
University of Lausanne
Co-authored papers 8
Christophe Dessimoz
University of Lausanne
Co-authored papers 6
Aur??lie Comte
University of Lausanne
Co-authored papers 5
Anne Niknejad
University of Lausanne
Co-authored papers 5
Sven Bergmann
University of Lausanne
Co-authored papers 3
Adam Godzik
University of California Riverside
Co-authored papers 3
Alexander Goesmann
Co-authored papers 3
Pascale Gaudet
University of Geneva
Co-authored papers 3
Zolt??n Kutalik
University of Lausanne
Co-authored papers 3
Erich Bornberg-Bauer
Institute for Evolution and Biodiversity, University of Munster
Co-authored papers 2
Laurent Keller
University of Lausanne
Co-authored papers 2
Alexandre Reymond
Co-authored papers 2
Kazutoyo Osoegawa
Co-authored papers 2
Manuel Mu??oz-Torres
Biosanitary Research Institute of Granada (ibs.GRANADA)
Co-authored papers 2
Brigitte Boeckmann
Co-authored papers 2
Suzanna E Lewis
Lawrence Berkeley National Laboratory
Co-authored papers 2
Claire O'Donovan
European Bioinformatics Institute
Co-authored papers 2
J Michael Cherry
Stanford University
Co-authored papers 2
Pieter J de Jong
Center for Genetics, Children's Hospital Oakland Research Institute
Co-authored papers 2
Paola Benaglio
Co-authored papers 2
David E K Ferrier
The Scottish Oceans Institute, University of St. Andrews
Co-authored papers 2
Michelle Giglio
University of Maryland School of Medicine, Institute for Genome Sciences
Co-authored papers 2
Stephen G Oliver
University of Cambridge
Co-authored papers 2
Jean Weissenbach
Institut Francois Jacob, CNRS, Universite Paris-Saclay
Co-authored papers 2
Len A Pennacchio
Lawrence Berkeley National Laboratory
Co-authored papers 2
Carlo Rivolta
Institute of Molecular and Clinical Ophthalmology Basel (IOB)
Co-authored papers 2
Maria J Martin
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Fran??ois Bonneton
Universite de Lyon, Universite Lyon 1, CNRS UMR 5242
Co-authored papers 2
Release 1.2