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Author Details

Sayoni Das
University College London
2012
26
17
PMIDPaper TitleJournal TitlePublished Year
35883853Profiling the Site of Protein CoAlation and Coenzyme A Stabilization Interactions.Antioxidants (Basel)2022
35755863Systematic indication extension for drugs using patient stratification insights generated by combinatorial analytics.Patterns (N Y)2022
36517845Genetic risk factors for ME/CFS identified using combinatorial analysis.J Transl Med2022
33135053CATH functional families predict functional sites in proteins.Bioinformatics2021
34713134Combinatorial Analysis of Phenotypic and Clinical Risk Factors Associated With Hospitalized COVID-19 Patients.Front Digit Health2021
34040048A method for the rational selection of drug repurposing candidates from multimodal knowledge harmonization.Sci Rep2021
30398663CATH: expanding the horizons of structure-based functional annotations for genome sequences.Nucleic Acids Res2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
31409758Emerging concepts in pseudoenzyme classification, evolution, and signaling.Sci Signal2019
29626155Protein CoAlation and antioxidant function of coenzyme A in prokaryotic cells.Biochem J2018
29617649Choosing the Best Enzyme Complex Structure Made Easy.Structure2018
27899584CATH: an expanded resource to predict protein function through structure and sequence.Nucleic Acids Res2017
28777078An overview of comparative modelling and resources dedicated to large-scale modelling of genome sequences.Acta Crystallogr D Struct Biol2017
27477482Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.Bioinformatics2016
26434392Protein function annotation using protein domain family resources.Methods2016
26578585Gene3D: expanding the utility of domain assignments.Nucleic Acids Res2016
27604469An expanded evaluation of protein function prediction methods shows an improvement in accuracy.Genome Biol2016
27332861Novel Computational Protocols for Functionally Classifying and Characterising Serine Beta-Lactamases.PLoS Comput Biol2016
27239284Highlights of the 2 (nd) Bioinformatics Student Symposium by ISCB RSG-UK.F1000Res2016
25348408CATH: comprehensive structural and functional annotations for genome sequences.Nucleic Acids Res2015
26451979Diversity in protein domain superfamilies.Curr Opin Genet Dev2015
26998223Highlights of the 1st Student Symposium of the ISCB RSG UK.F1000Res2015
26139634Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.Bioinformatics2015
25964299CATH FunFHMMer web server: protein functional annotations using functional family assignments.Nucleic Acids Res2015
24270792Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis.Nucleic Acids Res2014
22170293The chemical formula of a magnetotactic bacterium.Biotechnol Bioeng2012
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Collaborators

Christine Orengo
University College London, Institute of Structural and Molecular Biology
Co-authored papers 19
Natalie L Dawson
Institute of Structural and Molecular Biology, University College London
Co-authored papers 12
Ian Sillitoe
University College London
Co-authored papers 11
Jonathan G Lees
University College London, Institute of Structural and Molecular Biology
Co-authored papers 10
David Lee
University of Bristol
Co-authored papers 9
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Royal Holloway University of London
Co-authored papers 2
Pier Luigi Martelli
Department of Pharmacy and Biotechnology, University of Bologna
Co-authored papers 2
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European Bioinformatics Institute
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Asa Ben-Hur
Colorado State University
Co-authored papers 2
Richard Bonneau
Center for Computational Biology (CCB), Flatiron Institute, Simons Foundation
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Nevena Veljkovic
Heliant Ltd
Co-authored papers 2
Branislava Gemovic
Vinca Institute of Nuclear Sciences, University of Belgrade
Co-authored papers 2
Iddo Friedberg
Iowa State University
Co-authored papers 2
David T Jones
University College London
Co-authored papers 2
Tunca Do??an
Hacettepe University
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Filip Ginter
University of Turku
Co-authored papers 2
Steven E Brenner
University of California berkeley
Co-authored papers 2
Jos?? M Fern??ndez
Hospital Universitario y Politecnico la Fe
Co-authored papers 2
Renzhi Cao
Pacific Lutheran University
Co-authored papers 2
Indika Kahanda
University of North Florida
Co-authored papers 2
Rita Casadio
Department of Pharmacy and Biotechnology, University of Bologna
Co-authored papers 2
Matteo Re
Universita degli Studi di Milano
Co-authored papers 2
Burkhard Rost
Technical University of Munich (TUM)
Co-authored papers 2
Alfredo Benso
Italy Consorzio Interuniversitario Nazionale per l'Informatica
Co-authored papers 2
Giuseppe Profiti
University of Bologna
Co-authored papers 2
Kai Hakala
University of Turku
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Christophe Dessimoz
University of Lausanne
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Domenico Cozzetto
Imperial College London
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