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| 36376589 | Metagenome-assembled genome extraction and analysis from microbiomes using KBase. | Nat Protoc | 2023 |
| 36451056 | Publisher Correction: Metagenome-assembled genome extraction and analysis from microbiomes using KBase. | Nat Protoc | 2023 |
| 31693336 | Computationally Guided Discovery and Experimental Validation of Indole-3-acetic Acid Synthesis Pathways. | ACS Chem Biol | 2019 |
| 28865010 | Genome Characterization of Oleaginous Aspergillus oryzae BCC7051: A Potential Fungal-Based Platform for Lipid Production. | Curr Microbiol | 2018 |
| 29979655 | KBase: The United States Department of Energy Systems Biology Knowledgebase. | Nat Biotechnol | 2018 |
| 30320216 | Exploration of the Biosynthetic Potential of the <i>Populus</i> Microbiome. | mSystems | 2018 |
| 26819654 | Erratum to: Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park. | Stand Genomic Sci | 2016 |
| 27617060 | Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34. | Stand Genomic Sci | 2016 |
| 27811105 | Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds. | Genome Announc | 2016 |
| 27688341 | Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7. | Genome Announc | 2016 |
| 27123157 | Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost. | Stand Genomic Sci | 2016 |
| 27422831 | Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis. | Appl Environ Microbiol | 2016 |
| 27274784 | Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)). | Stand Genomic Sci | 2016 |
| 26744606 | Complete genome sequence of Methanospirillum hungatei type strain JF1. | Stand Genomic Sci | 2016 |
| 25767232 | High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater. | Genome Announc | 2015 |
| 26380642 | Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4. | Stand Genomic Sci | 2015 |
| 26500717 | Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park. | Stand Genomic Sci | 2015 |
| 26519390 | Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis. | Appl Environ Microbiol | 2015 |
| 26442136 | Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park. | Stand Genomic Sci | 2015 |
| 26175035 | Ebolavirus comparative genomics. | FEMS Microbiol Rev | 2015 |
| 26035711 | Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels. | PLoS One | 2015 |
| 26111937 | Genome-scale resources for Thermoanaerobacterium saccharolyticum. | BMC Syst Biol | 2015 |
| 25831533 | Trichodesmium genome maintains abundant, widespread noncoding DNA in situ, despite oligotrophic lifestyle. | Proc Natl Acad Sci U S A | 2015 |
| 25614562 | Complete Genome Sequence of Anaeromyxobacter sp. Fw109-5, an Anaerobic, Metal-Reducing Bacterium Isolated from a Contaminated Subsurface Environment. | Genome Announc | 2015 |
| 25722247 | Insights from 20 years of bacterial genome sequencing. | Funct Integr Genomics | 2015 |
| 25744998 | Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes. | Genome Announc | 2015 |
| 24655715 | Comparison of single-molecule sequencing and hybrid approaches for finishing the genome of Clostridium autoethanogenum and analysis of CRISPR systems in industrial relevant Clostridia. | Biotechnol Biofuels | 2014 |
| 25780509 | Quality scores for 32,000 genomes. | Stand Genomic Sci | 2014 |
| 25780503 | Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae. | Stand Genomic Sci | 2014 |
| 25197486 | Genome sequence of the Thermotoga thermarum type strain (LA3(T)) from an African solfataric spring. | Stand Genomic Sci | 2014 |
| 25197484 | Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia. | Stand Genomic Sci | 2014 |
| 25197461 | Complete Genome sequence of Burkholderia phymatum STM815(T), a broad host range and efficient nitrogen-fixing symbiont of Mimosa species. | Stand Genomic Sci | 2014 |
| 25197444 | Complete genome sequence of Anabaena variabilis ATCC 29413. | Stand Genomic Sci | 2014 |
| 24930142 | Evaluation and validation of de novo and hybrid assembly techniques to derive high-quality genome sequences. | Bioinformatics | 2014 |
| 23516212 | Draft genome sequence of Frankia sp. strain CN3, an atypical, noninfective (Nod-) ineffective (Fix-) isolate from Coriaria nepalensis. | Genome Announc | 2013 |
| 25197432 | Complete genome sequence of Mesorhizobium ciceri bv. biserrulae type strain (WSM1271(T)). | Stand Genomic Sci | 2013 |
| 25197431 | Complete genome sequence of Granulicella tundricola type strain MP5ACTX9(T), an Acidobacteria from tundra soil. | Stand Genomic Sci | 2013 |
| 24976886 | Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075(T.). | Stand Genomic Sci | 2013 |
| 24295562 | Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass. | Biotechnol Biofuels | 2013 |
| 24501647 | Genome sequence of Frateuria aurantia type strain (Kondô 67(T)), a xanthomonade isolated from Lilium auratium Lindl. | Stand Genomic Sci | 2013 |
| 24501646 | Complete genome sequence of Granulicella mallensis type strain MP5ACTX8(T), an acidobacterium from tundra soil. | Stand Genomic Sci | 2013 |
| 24501643 | Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)). | Stand Genomic Sci | 2013 |
| 24072863 | Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules. | Genome Announc | 2013 |
| 24205326 | Industrial robustness: understanding the mechanism of tolerance for the Populus hydrolysate-tolerant mutant strain of Clostridium thermocellum. | PLoS One | 2013 |
| 23833133 | Genome Sequence of Streptomyces viridosporus Strain T7A ATCC 39115, a Lignin-Degrading Actinomycete. | Genome Announc | 2013 |
| 23825601 | Genome analysis and physiological comparison of Alicycliphilus denitrificans strains BC and K601(T.). | PLoS One | 2013 |
| 24019993 | Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations. | Stand Genomic Sci | 2013 |
| 23991256 | Permanent draft genome sequence of Comamonas testosteroni KF-1. | Stand Genomic Sci | 2013 |
| 23991255 | Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H(T)), and emendation of the species Turneriella parva. | Stand Genomic Sci | 2013 |
| 23991253 | Complete genome sequence of Halorhodospira halophila SL1. | Stand Genomic Sci | 2013 |