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Author Details

Shankar Subramaniam
University of California
1989
256
66
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37855672LIPID MAPS: update to databases and tools for the lipidomics community.Nucleic Acids Res2024
37855672LIPID MAPS: update to databases and tools for the lipidomics community.Nucleic Acids Res2024
36732946Ablation of Adar1 in myeloid cells imprints a global antiviral state in the lung and heightens early immunity against SARS-CoV-2.Cell Rep2023
37849634Endotype Characterization Reveals Mechanistic Differences Across Brain Regions in Sporadic Alzheimer's Disease.J Alzheimers Dis Rep2023
37924159Limitations of the human iPSC-derived neuron model for early-onset Alzheimer's disease.Mol Brain2023
37572794Biliary atresia is associated with polygenic susceptibility in ciliogenesis and planar polarity effector genes.J Hepatol2023
37638019The Janus face of proliferating plasmablasts in dengue and COVID-19 infections.Front Immunol2023
37213689Temporal transcriptional control of neural induction in human induced pluripotent stem cells.Front Mol Neurosci2023
36577930SREBP signaling is essential for effective B cell responses.Nat Immunol2023
36993235Modeling transcriptional regulation of the cell cycle using a novel cybernetic-inspired approach.bioRxiv2023
36732946Ablation of Adar1 in myeloid cells imprints a global antiviral state in the lung and heightens early immunity against SARS-CoV-2.Cell Rep2023
37849634Endotype Characterization Reveals Mechanistic Differences Across Brain Regions in Sporadic Alzheimer's Disease.J Alzheimers Dis Rep2023
37572794Biliary atresia is associated with polygenic susceptibility in ciliogenesis and planar polarity effector genes.J Hepatol2023
37924159Limitations of the human iPSC-derived neuron model for early-onset Alzheimer's disease.Mol Brain2023
37638019The Janus face of proliferating plasmablasts in dengue and COVID-19 infections.Front Immunol2023
36993235Modeling transcriptional regulation of the cell cycle using a novel cybernetic-inspired approach.bioRxiv2023
37213689Temporal transcriptional control of neural induction in human induced pluripotent stem cells.Front Mol Neurosci2023
36577930SREBP signaling is essential for effective B cell responses.Nat Immunol2023
34862502GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser.Nat Methods2022
35448980Modular and mechanistic changes across stages of colorectal cancer.BMC Cancer2022
36224601Transcriptomic profiling of sporadic Alzheimer's disease patients.Mol Brain2022
35672450ARID1B, a molecular suppressor of erythropoiesis, is essential for the prevention of Monge's disease.Exp Mol Med2022
36192616Modeling Multiphase Heat and Mass Transfer in an Agitated Filter Dryer by Integrating Experiment, Computations, and Analytical Solutions.Pharm Res2022
37983749MetGENE: gene-centric metabolomics information retrieval tool.Gigascience2022
36812596Identifying and analyzing sepsis states: A retrospective study on patients with sepsis in ICUs.PLOS Digit Health2022
34862502GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser.Nat Methods2022
35077374Healthcare Innovations to Address the Challenges of the COVID-19 Pandemic.IEEE J Biomed Health Inform2022
35084109Endotype reversal as a novel strategy for screening drugs targeting familial Alzheimer's disease.Alzheimers Dement2022
37983749MetGENE: gene-centric metabolomics information retrieval tool.Gigascience2022
35672450ARID1B, a molecular suppressor of erythropoiesis, is essential for the prevention of Monge's disease.Exp Mol Med2022
35448980Modular and mechanistic changes across stages of colorectal cancer.BMC Cancer2022
36812596Identifying and analyzing sepsis states: A retrospective study on patients with sepsis in ICUs.PLOS Digit Health2022
36224601Transcriptomic profiling of sporadic Alzheimer's disease patients.Mol Brain2022
36192616Modeling Multiphase Heat and Mass Transfer in an Agitated Filter Dryer by Integrating Experiment, Computations, and Analytical Solutions.Pharm Res2022
35084109Endotype reversal as a novel strategy for screening drugs targeting familial Alzheimer's disease.Alzheimers Dement2022
35077374Healthcare Innovations to Address the Challenges of the COVID-19 Pandemic.IEEE J Biomed Health Inform2022
33467846A Practical Guide to Metabolomics Software Development.Anal Chem2021
34174187The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination.Cell2021
33468662Longitudinal shear stress response in human endothelial cells to atheroprone and atheroprotective conditions.Proc Natl Acad Sci U S A2021
33467846A Practical Guide to Metabolomics Software Development.Anal Chem2021
33731358Temporal mechanisms of myogenic specification in human induced pluripotent stem cells.Sci Adv2021
33873199Adjuvanting a subunit COVID-19 vaccine to induce protective immunity.Nature2021
33972936Impaired T-cell and antibody immunity after COVID-19 infection in chronically immunosuppressed transplant recipients.bioRxiv2021
33594366Adjuvanting a subunit SARS-CoV-2 nanoparticle vaccine to induce protective immunity in non-human primates.bioRxiv2021
33369203The Mechanistic Metamorphosis.WIREs Mech Dis2021
34455770ADAP-KDB: A Spectral Knowledgebase for Tracking and Prioritizing Unknown GC-MS Spectra in the NIH's Metabolomics Data Repository.Anal Chem2021
34721400Immune Response in Severe and Non-Severe Coronavirus Disease 2019 (COVID-19) Infection: A Mechanistic Landscape.Front Immunol2021
34547287The maternal blood lipidome is indicative of the pathogenesis of severe preeclampsia.J Lipid Res2021
34883668What We Are Learning from COVID-19 for Respiratory Protection: Contemporary and Emerging Issues.Polymers (Basel)2021
34595164Heme Oxygenase-1 at the Nexus of Endothelial Cell Fate Decision Under Oxidative Stress.Front Cell Dev Biol2021
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Collaborators

Mano R Maurya
Co-authored papers 38
Eoin Fahy
Co-authored papers 30
Shakti Gupta
Co-authored papers 29
Edward A Dennis
Co-authored papers 20
Christopher K Glass
University of California San Diego
Co-authored papers 17
Manish Sud
Co-authored papers 12
Kavitha Mukund
Co-authored papers 12
Robert C Murphy
Co-authored papers 11
Shu Chien
and Institute of Engineering in Medicine, University of California
Co-authored papers 11
Christian R H Raetz
Co-authored papers 10
Eric Jakobsson
Co-authored papers 10
Joseph H Nadeau
Co-authored papers 10
John Y-J Shyy
Co-authored papers 10
Dawn Cotter
Co-authored papers 10
Darwin S Linthicum
Co-authored papers 9
David W Russell
Co-authored papers 9
Rakesh Sindhi
Co-authored papers 9
Alfred H Merrill
Co-authored papers 9
Bali Pulendran
Institute for Immunity, Stanford University School of Medicine, Stanford University
Co-authored papers 9
Ananth Grama
Co-authored papers 9
Lana X Garmire
University of Michigan ann arbor
Co-authored papers 8
Mylarappa Ningappa
Co-authored papers 8
Haley A Brown
Co-authored papers 8
Brian Saunders
Co-authored papers 8
Chethan Ashokkumar
Co-authored papers 8
Srinivasan Ramachandran
Co-authored papers 7
See-Wing Chiu
Co-authored papers 7
Oswald Quehenberger
Co-authored papers 7
Chittibabu Guda
Co-authored papers 7
Jun Min
Co-authored papers 7
Release 1.2