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Author Details

Mehmet Eren Ahsen
Gies College of Business, University of Illinois at Urbana-Champaign.
2015
25
11
PMIDPaper TitleJournal TitlePublished Year
36409497External Validation of an Ensemble Model for Automated Mammography Interpretation by Artificial Intelligence.JAMA Netw Open2022
33241320COSIFER: a Python package for the consensus inference of molecular interaction networks.Bioinformatics2021
33745882Evaluation of artificial intelligence systems for assisting neurologists with fast and accurate annotations of scalp electroencephalography data.EBioMedicine2021
34413191The Fermi-Dirac distribution provides a calibrated probabilistic output for binary classifiers.Proc Natl Acad Sci U S A2021
34321221Unannotated small RNA clusters associated with circulating extracellular vesicles detect early stage liver cancer.Gut2021
34146471A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discovery.Cell Syst2021
33948743Effect of AI Explanations on Human Perceptions of Patient-Facing AI-Powered Healthcare Systems.J Med Syst2021
34166362Transcriptomic characterization of cancer-testis antigens identifies MAGEA3 as a driver of tumor progression in hepatocellular carcinoma.PLoS Genet2021
31095341Radiogenomics Consortium Genome-Wide Association Study Meta-Analysis of Late Toxicity After Prostate Cancer Radiotherapy.J Natl Cancer Inst2020
31905016R/PY-SUMMA: An R/Python Package for Unsupervised Ensemble Learning for Binary Classification Problems in Bioinformatics.J Comput Biol2020
31941899Intratumoral heterogeneity and clonal evolution in liver cancer.Nat Commun2020
32945258The transcriptomic response of cells to a drug combination is more than the sum of the responses to the monotherapies.Elife2020
32972997Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data.Life Sci Alliance2020
32119094Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms.JAMA Netw Open2020
30951672exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids.Cell2019
31209238Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen.Nat Commun2019
31506535NeTFactor, a framework for identifying transcriptional regulators of gene expression-based biomarkers.Sci Rep2019
30468237Integrated nanoscale deterministic lateral displacement arrays for separation of extracellular vesicles from clinically-relevant volumes of biological samples.Lab Chip2018
33313341Inferring Genome-Wide Interaction Networks Using the Phi-Mixing Coefficient, and Applications to Lung and Breast Cancer (Invited Paper).IEEE Trans Mol Biol Multiscale Commun2018
29891868A Nasal Brush-based Classifier of Asthma Identified by Machine Learning Analysis of Nasal RNA Sequence Data.Sci Rep2018
31031555Preference-Sensitive Management of Post-Mammography Decisions in Breast Cancer Diagnosis.Prod Oper Manag2018
30356117A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection.Nat Commun2018
28361685Sparse feature selection for classification and prediction of metastasis in endometrial cancer.BMC Genomics2017
27034613Optimized Prediction of Extreme Treatment Outcomes in Ovarian Cancer.Cancer Inform2016
27569922Estimating Waiting Time for Deceased Donor Renal Transplantion in the Era of New Kidney Allocation System.Transplant Proc2016
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Collaborators

Gustavo Stolovitzky
IBM T.J. Watson Research Center
Co-authored papers 14
Gaurav Pandey
Sanjay Gandhi Post Graduate Institute of Medical Sciences
Co-authored papers 5
Justin Guinney
University of Washington
Co-authored papers 5
Thomas Yu
Co-authored papers 5
Thomas Schaffter
Icahn School of Medicine at Mount Sinai
Co-authored papers 4
Bojan Losic
Co-authored papers 4
Ashutosh K Tewari
Co-authored papers 3
Michael A White
University of Georgia
Co-authored papers 3
Thea Norman
Bill & Melinda Gates Foundation
Co-authored papers 3
Robert Sebra
Icahn School of Medicine at Mount Sinai
Co-authored papers 2
Julio Saez-Rodriguez
Institute of Computational Biomedicine, Heidelberg University
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Daniela Sia
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University of Wisconsin-Madison.
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Icahn School of Medicine at Mount Sinai
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Chunlei Wu
The Scripps Research Institute
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Institute for Molecular Bioscience and ARC Centre of Excellence in Bioinformatics
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Joel Rozowsky
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Allison L Creason
Oregon Health and Science University
Co-authored papers 1
Joshua A Welsh
Co-authored papers 1
Matthew Inkman
The Genome Institute, Washington University School of Medicine
Co-authored papers 1
Brian J Haas
Broad Institute of MIT and Harvard
Co-authored papers 1
Geoffrey S Ginsburg
National Institutes of Health
Co-authored papers 1
Christoph I Lee
University of Washington School of Medicine
Co-authored papers 1
Cristian Caloian
Ontario Institute for Cancer Research
Co-authored papers 1
Sergio A Lira
Co-authored papers 1
Lara M Mangravite
Children's Hospital Oakland Research Institute
Co-authored papers 1
Catharine M L West
University of Manchester
Co-authored papers 1
Dennis Wang
Sheffield Institute of Translational Neuroscience, University of Sheffield
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Release 1.2