Author details

Full Name

Susan M Bridges

Affiliation

Mississippi State University

ORCID

Career Start Year

1980

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
31210271	Chickspress: a resource for chicken gene expression.	Database (Oxford)	2019
24526636	Genome Sequence of the Oleaginous Yeast Rhodotorula glutinis ATCC 204091.	Genome Announc	2014
26484097	Genome comparison of Listeria monocytogenes serotype 4a strain HCC23 with selected lineage I and lineage II L. monocytogenes strains and other Listeria strains.	Genom Data	2014
23161678	Gene Ontology annotations and resources.	Nucleic Acids Res	2013
23850840	Interestingness measures and strategies for mining multi-ontology multi-level association rules from gene ontology annotations for the discovery of new GO relationships.	J Biomed Inform	2013
23505380	Polycomb group gene OsFIE2 regulates rice (Oryza sativa) seed development and grain filling via a mechanism distinct from Arabidopsis.	PLoS Genet	2013
23071802	Cross-Ontology multi-level association rule mining in the Gene Ontology.	PLoS One	2012
23046182	Proceedings of the 2012 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference. Introduction.	BMC Bioinformatics	2012
21075795	AgBase: supporting functional modeling in agricultural organisms.	Nucleic Acids Res	2011
22069738	A public platform for the verification of the phenotypic effect of candidate genes for resistance to aflatoxin accumulation and Aspergillus flavus infection in maize.	Toxins (Basel)	2011
21984925	Comparison of four ChIP-Seq analytical algorithms using rice endosperm H3K27 trimethylation profiling data.	PLoS One	2011
22165918	Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference. Introduction.	BMC Bioinformatics	2011
21779156	Prediction of cell penetrating peptides by support vector machines.	PLoS Comput Biol	2011
21602330	Genome sequence of lineage III Listeria monocytogenes strain HCC23.	J Bacteriol	2011
21513508	The proteogenomic mapping tool.	BMC Bioinformatics	2011
20013369	Gene model detection using mass spectrometry.	Methods Mol Biol	2010
20729368	Genome sequence of the solvent-producing bacterium Clostridium carboxidivorans strain P7T.	J Bacteriol	2010
20946613	GOModeler--a tool for hypothesis-testing of functional genomics datasets.	BMC Bioinformatics	2010
20946609	Integrated database for identifying candidate genes for Aspergillus flavus resistance in maize.	BMC Bioinformatics	2010
20946592	Proceedings of the 2010 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference.	BMC Bioinformatics	2010
20863402	Complete genome and comparative analysis of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5.	BMC Genomics	2010
20961407	An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation.	Genome Biol	2010
20113962	Comparative functional genomics of mammalian DNA methyltransferases.	Reprod Biomed Online	2010
19811674	Proceedings of the 2009 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference. Introduction.	BMC Bioinformatics	2009
19607650	Introduction to the proceedings of the Avian Genomics and Gene Ontology Annotation Workshop.	BMC Genomics	2009
19811693	Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data.	BMC Bioinformatics	2009
19811691	Exploratory visual analysis of conserved domains on multiple sequence alignments.	BMC Bioinformatics	2009
19811686	Integrating phenotype and gene expression data for predicting gene function.	BMC Bioinformatics	2009
18187504	Gene Ontology annotation quality analysis in model eukaryotes.	Nucleic Acids Res	2008
18793454	Proceedings of the 2008 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.	BMC Bioinformatics	2008
18814325	Comparative analysis of proteome differential regulation during cell dedifferentiation in Arabidopsis.	Proteomics	2008
18539730	Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T.	J Bacteriol	2008
18287116	Empirical comparison of ab initio repeat finding programs.	Nucleic Acids Res	2008
18412963	Accelerating string set matching in FPGA hardware for bioinformatics research.	BMC Bioinformatics	2008
17135208	AgBase: a unified resource for functional analysis in agriculture.	Nucleic Acids Res	2007
18047724	ProtQuant: a tool for the label-free quantification of MudPIT proteomics data.	BMC Bioinformatics	2007
18047723	Prediction of peptides observable by mass spectrometry applied at the experimental set level.	BMC Bioinformatics	2007
18047708	Proceedings of the Fourth Annual Conference of the MidSouth Computational Biology and Bioinformatics Society.	BMC Bioinformatics	2007
17675869	GOing from functional genomics to biological significance.	Cytogenet Genome Res	2007
16596704	Modeling a whole organ using proteomics: the avian bursa of Fabricius.	Proteomics	2006
16961921	AgBase: a functional genomics resource for agriculture.	BMC Genomics	2006
15150699	Revealing gene transcription and translation initiation patterns in archaea, using an interactive clustering model.	Extremophiles	2004
16662151	Isolation and Characterization of an Iron-Containing Superoxide Dismutase From Water Lily, Nuphar luteum.	Plant Physiol	1982
7306048	Absence of the iron-containing superoxide dismutase in mitochondria from mustard (Brassica campestris).	Biochem J	1981
16661901	Distribution of iron-containing superoxide dismutase in vascular plants.	Plant Physiol	1981
16661630	Chemiluminescence in Wounded Root Tissue : EVIDENCE FOR PEROXIDASE INVOLVEMENT.	Plant Physiol	1981
7396513	Isolation and characterization of an iron-containing superoxide dismutase from a eucaryote, Brassica campestris.	Arch Biochem Biophys	1980

1 - 47 of 47

Ying Xu

The China-Japan Union Hospital, Jilin University

Career Start Year 2002

Number of shared co-authors 0

Don Gilbert

Indiana University

Career Start Year 2002

Number of shared co-authors 0

Aalt D J van Dijk

Wageningen University and Research

Career Start Year 2001

Number of shared co-authors 11

Rajkumar Sasidharan

University of California los angeles

Career Start Year 2000

Number of shared co-authors 14

Ana Conesa

Institute for Integrative Systems Biology, Spanish National Research Council (CSIC)

Career Start Year 2000

Number of shared co-authors 5

Yunchen Gong

University of Toronto

Career Start Year 2000

Number of shared co-authors 0

Thomas Girke

Institute for Integrative Genome Biology, University of California Riverside

Career Start Year 1998

Number of shared co-authors 0

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 8

Marcin P Joachimiak

E O Lawrence Berkeley National Laboratory, UCSF Medical Center, University of California, Berkeley, University of Chicago

Career Start Year 1997

Number of shared co-authors 2

Iddo Friedberg

Iowa State University

Career Start Year 1997

Number of shared co-authors 24

Christopher T Workman

Technical University of Denmark

Career Start Year 1995

Number of shared co-authors 2

Dirk Walther

Max Planck Institute of Molecular Plant Physiology

Career Start Year 1995

Number of shared co-authors 0

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Career Start Year 1994

Number of shared co-authors 3

Dennis Shasha

Courant Institute of Mathematical Sciences, New York University

Career Start Year 1994

Number of shared co-authors 10

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 0

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 3

Simon Kasif

Boston University

Career Start Year 1993

Number of shared co-authors 2

Manesh Shah

University of Tennessee Knoxville

Career Start Year 1993

Number of shared co-authors 0

Marc R Wilkins

University of New South Wales

Career Start Year 1992

Number of shared co-authors 2

Erik L L Sonnhammer

Stockholm University

Career Start Year 1992

Number of shared co-authors 5

Cathy H Wu

Georgetown University Medical Center

Career Start Year 1992

Number of shared co-authors 32

Lee Ann McCue

Pacific Northwest National Laboratory

Career Start Year 1991

Number of shared co-authors 1

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Career Start Year 1991

Number of shared co-authors 0

Peer Bork

University of Wurzburg

Career Start Year 1989

Number of shared co-authors 18

Lincoln Stein

Ontario Institute for Cancer Research, University Avenue

Career Start Year 1986

Number of shared co-authors 21

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 21

Martin Kuiper

Norwegian University of Science and Technology

Career Start Year 1983

Number of shared co-authors 12

Darren A Natale

Georgetown University Medical Center

Career Start Year 1982

Number of shared co-authors 33

Brian J Haas

Broad Institute of MIT and Harvard

Career Start Year 1981

Number of shared co-authors 4

Christian J Stoeckert

Perelman School of Medicine, University of Pennsylvania

Career Start Year 1980

Number of shared co-authors 17

row(s) 1 - 30 of 30

Fiona M McCarthy

University of Arizona

Co-authored papers 14

Prashanti Manda

University of North Carolina at Greensboro

Co-authored papers 5

Teresia J Buza

Pennsylvania State University, University Park, State College

Co-authored papers 3

Mikhail G Dozmorov

Virginia Commonwealth University

Co-authored papers 2

John E Mylroie

Department of Geosciences Mississippi State University Starkville MS USA.

Co-authored papers 2

Lakshmi Pillai

University of Arkansas for Medical Sciences

Co-authored papers 2

David P Hill

Co-authored papers 2

Mary E Dolan

National Center for Geographic Information and Analysis, University of Maine

Co-authored papers 2

Edward J Perkins

Co-authored papers 2

Roger Stephan

Ontario Institute for Cancer Research

Co-authored papers 1

Jane Lomax

Wellcome Sanger Institute

Co-authored papers 1

Petra Fey

Center for Genetic Medicine, Northwestern University.

Co-authored papers 1

Alan Bridge

carnegie mellon university

Co-authored papers 1

Catherine Rivoire

carnegie mellon university

Co-authored papers 1

Siddhartha Basu

West Bengal University of Animal and Fishery Sciences

Co-authored papers 1

Kati Laiho

Co-authored papers 1

Shuai Weng

Stanford University

Co-authored papers 1

Selina S Dwight

Stanford University School of Medicine

Co-authored papers 1

Ranjana Kishore

California Institute of Technology

Co-authored papers 1

Seth Carbon

Lawrence Berkeley National Laboratory

Co-authored papers 1

Stephen G Oliver

University of Cambridge

Co-authored papers 1

Mark D McDowall

European Bioinformatics Institute

Co-authored papers 1

Michelle Giglio

University of Maryland School of Medicine, Institute for Genome Sciences

Co-authored papers 1

Tony Sawford

European Bioinformatics Institute

Co-authored papers 1

Shyamala Sundaram

Centre Medical Universitaire

Co-authored papers 1

Brenley K McIntosh

Texas A&M University, College Station

Co-authored papers 1

J Michael Cherry

Stanford University

Co-authored papers 1

Kim Rutherford

University of Cambridge

Co-authored papers 1

Victoria Petri

Medical College of Wisconsin and Marquette University

Co-authored papers 1

Kristian B Axelsen

Centre Medical Universitaire

Co-authored papers 1

1 - 30

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