Skip to Main Content

Author Details

Emma Lundberg (CM4AI)
Stanford University
0000-0001-7034-0850
2007
223
55
Data acquisition, tools, molecular imaging
PMIDPaper TitleJournal TitlePublished Year
36711953Segmenting functional tissue units across human organs using community-driven development of generalizable machine learning algorithms.bioRxiv2023
37468619Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging.Nat Methods2023
36711953Segmenting functional tissue units across human organs using community-driven development of generalizable machine learning algorithms.bioRxiv2023
36646791A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung.Nat Cell Biol2023
36541010Single Cell Spatial Biology for Precision Cancer Medicine.Pac Symp Biocomput2023
37537179Segmenting functional tissue units across human organs using community-driven development of generalizable machine learning algorithms.Nat Commun2023
37537179Segmenting functional tissue units across human organs using community-driven development of generalizable machine learning algorithms.Nat Commun2023
37468619Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging.Nat Methods2023
36646791A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung.Nat Cell Biol2023
36541010Single Cell Spatial Biology for Precision Cancer Medicine.Pac Symp Biocomput2023
34811556Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging.Nat Methods2022
36175767Analysis of the Human Protein Atlas Weakly Supervised Single-Cell Classification competition.Nat Methods2022
35654359New Views of Old Proteins: Clarifying the Enigmatic Proteome.Mol Cell Proteomics2022
35590073Deep Visual Proteomics defines single-cell identity and heterogeneity.Nat Biotechnol2022
35896733Imaging cell biology.Nat Cell Biol2022
35931766Author Correction: Spatiotemporal dissection of the cell cycle with single-cell proteogenomics.Nature2022
35859028The emerging landscape of spatial profiling technologies.Nat Rev Genet2022
35534633Understudied proteins: opportunities and challenges for functional proteomics.Nat Methods2022
35534555An open invitation to the Understudied Proteins Initiative.Nat Biotechnol2022
35063094The new era of quantitative cell imaging-challenges and opportunities.Mol Cell2022
34811556Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging.Nat Methods2022
35084980The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells.Science2022
35654359New Views of Old Proteins: Clarifying the Enigmatic Proteome.Mol Cell Proteomics2022
35534633Understudied proteins: opportunities and challenges for functional proteomics.Nat Methods2022
35534555An open invitation to the Understudied Proteins Initiative.Nat Biotechnol2022
35859028The emerging landscape of spatial profiling technologies.Nat Rev Genet2022
35590073Deep Visual Proteomics defines single-cell identity and heterogeneity.Nat Biotechnol2022
36175767Analysis of the Human Protein Atlas Weakly Supervised Single-Cell Classification competition.Nat Methods2022
35931766Author Correction: Spatiotemporal dissection of the cell cycle with single-cell proteogenomics.Nature2022
35896733Imaging cell biology.Nat Cell Biol2022
35063094The new era of quantitative cell imaging-challenges and opportunities.Mol Cell2022
35084980The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells.Science2022
33436349Illuminating Non-genetic Cellular Heterogeneity with Imaging-Based Spatial Proteomics.Trends Cancer2021
34015259Which image-based phenotypes are most promising for using AI to understand cellular functions and why?Cell Syst2021
33627808Spatiotemporal dissection of the cell cycle with single-cell proteogenomics.Nature2021
33674797Pycro-Manager: open-source software for customized and reproducible microscope control.Nat Methods2021
33436349Illuminating Non-genetic Cellular Heterogeneity with Imaging-Based Spatial Proteomics.Trends Cancer2021
34819669A multi-scale map of cell structure fusing protein images and interactions.Nature2021
34594030DeepImageJ: A user-friendly environment to run deep learning models in ImageJ.Nat Methods2021
33627808Spatiotemporal dissection of the cell cycle with single-cell proteogenomics.Nature2021
33674797Pycro-Manager: open-source software for customized and reproducible microscope control.Nat Methods2021
34819669A multi-scale map of cell structure fusing protein images and interactions.Nature2021
34594030DeepImageJ: A user-friendly environment to run deep learning models in ImageJ.Nat Methods2021
34015259Which image-based phenotypes are most promising for using AI to understand cellular functions and why?Cell Syst2021
32558245Spatial Characterization of the Human Centrosome Proteome Opens Up New Horizons for a Small but Versatile Organelle.Proteomics2020
31969731Publisher Correction: Analysis of the Human Protein Atlas Image Classification competition.Nat Methods2020
31822866Publisher Correction: Analysis of the Human Protein Atlas Image Classification competition.Nat Methods2020
32760039Author Correction: Analysis of the Human Protein Atlas Image Classification competition.Nat Methods2020
32744794Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder.Mol Syst Biol2020
33067450A high-stringency blueprint of the human proteome.Nat Commun2020
  • 1 - 50 of 230

Recommended Authors

Alexandre R Campos
Sanford Burnham Prebys Medical Discovery Institute
Career Start Year 2019
Number of shared co-authors 1
Fabian Frommelt
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Career Start Year 2017
Number of shared co-authors 2
Inigo Barrio-Hernandez
European Bioinformatics Institute (EMBL-EBI)
Career Start Year 2015
Number of shared co-authors 5
Dennis Goldfarb
Washington University School of Medicine
Career Start Year 2012
Number of shared co-authors 1
Florent Dingli
Institut Curie, PSL Research University
Career Start Year 2011
Number of shared co-authors 5
Ankit Sinha
Max Planck Institute of Biochemistry
Career Start Year 2011
Number of shared co-authors 4
Vladimir Ignatchenko
Margaret Cancer Center
Career Start Year 2009
Number of shared co-authors 1
Yansheng Liu
Yale University School of Medicine
Career Start Year 2008
Number of shared co-authors 14
Alex Ignatchenko
European Bioinformatics Institute (EMBL-EBI)
Career Start Year 2005
Number of shared co-authors 5
Erin D Jeffery
Agenus Inc, American Society for Mass Spectrometry, Hartwick College, Human Proteome Organisation, Large Scale Biology Corp, University of Virginia
Career Start Year 2005
Number of shared co-authors 2
Brian L Hood
The Henry M. Jackson Foundation for the Advancement of Military Medicine
Career Start Year 2004
Number of shared co-authors 7
Feng Yang
Howard Hughes Medical Institute, University of California San Diego
Career Start Year 2003
Number of shared co-authors 12
Kai St??hler
Universitatsklinikum
Career Start Year 2002
Number of shared co-authors 5
Kieran Wynne
University College Dublin
Career Start Year 2002
Number of shared co-authors 3
Arun P Wiita
University of California San Francisco
Career Start Year 2002
Number of shared co-authors 14
Ruth Isserlin
University of Toronto
Career Start Year 2002
Number of shared co-authors 5
Jeroen A A Demmers
Erasmus Medical Center
Career Start Year 2000
Number of shared co-authors 7
Jayantha Gunaratne
Institute of Molecular and Cell Biology
Career Start Year 2000
Number of shared co-authors 3
Gerard Cagney
Conway Institute of Biomedical and Biomolecular Sciences, University College Dublin
Career Start Year 2000
Number of shared co-authors 25
Paul Taylor
Hospital for Sick Children
Career Start Year 1999
Number of shared co-authors 2
Igor Jurisica
Schroeder Arthritis Institute
Career Start Year 1998
Number of shared co-authors 6
J Lynn Fink
The University of Queensland Diamantina Institute, The University of Queensland
Career Start Year 1997
Number of shared co-authors 5
Thomas Kislinger
Princess Margaret Cancer Centre, University Health Network, University of Toronto
Career Start Year 1997
Number of shared co-authors 13
Kaylene J Simpson
The University of Melbourne, Peter MacCallum Cancer Centre
Career Start Year 1996
Number of shared co-authors 6
Damarys Loew
Institut Curie, PSL Research University
Career Start Year 1996
Number of shared co-authors 6
Matthias Gstaiger
Institute of Molecular Systems Biology, ETH Zurich
Career Start Year 1994
Number of shared co-authors 9
Jean-Karim H??rich??
University of California san francisco
Career Start Year 1994
Number of shared co-authors 20
Jiefei Tong
Hospital for Sick Children
Career Start Year 1993
Number of shared co-authors 4
Andrew Emili
Boston University School of Medicine, Boston University
Career Start Year 1991
Number of shared co-authors 21
Emanuel F Petricoin
Center for Applied Proteomics and Molecular Medicine, George Mason University
Career Start Year 1988
Number of shared co-authors 30

Collaborators

Mathias Uhl??n
KTH Royal Institute of Technology
Co-authored papers 57
Fredrik Pont??n
Uppsala University
Co-authored papers 26
Linn Fagerberg
KTH Royal Institute of Technology
Co-authored papers 17
Per Oksvold
KTH-Royal Institute of Technology
Co-authored papers 14
Charlotte Stadler
KTH Royal Institute of Technology and Science for Life Laboratories
Co-authored papers 14
Anna Asplund
Uppsala University
Co-authored papers 13
Devin P Sullivan
KTH - Royal Institute of Technology
Co-authored papers 12
Caroline Kampf
Uppsala University
Co-authored papers 11
Diana Mahdessian
KTH - Royal Institute of Technology
Co-authored papers 11
Martin Hjelmare
KTH-Royal Institute of Technology
Co-authored papers 11
Cecilia Lindskog
Uppsala University
Co-authored papers 11
Frida Danielsson
KTH - Royal Institute of Technology
Co-authored papers 11
Marie Skogs
Royal Institute of Technology
Co-authored papers 10
Peter Nilsson
Linkoping University
Co-authored papers 10
Sophia Hober
KTH Royal Institute of Technology
Co-authored papers 10
Jochen M Schwenk
KTH Royal Institute of Technology
Co-authored papers 9
Anthony J Cesnik
University of Wisconsin-Madison
Co-authored papers 9
Adil Mardinoglu
Royal Institute of Technology Science for Life Laboratory Stockholm Sweden.
Co-authored papers 9
??sa Sivertsson
KTH-Royal Institute of Technology
Co-authored papers 9
Christian Gnann
KTH-Royal Institute of Technology
Co-authored papers 8
Casper F Winsnes
KTH - Royal Institute of Technology
Co-authored papers 8
Kalle von Feilitzen
KTH Royal Institute of Technology
Co-authored papers 7
Eric W Deutsch
Institute for Systems Biology
Co-authored papers 7
Bj??rn M Hallstr??m
Division of Clinical Genetics, Lund University
Co-authored papers 7
Gilbert S Omenn
and School of Public Health, University of Michigan ann arbor
Co-authored papers 7
Lydie Lane
SIB Swiss Institute of Bioinformatics and University of Geneva
Co-authored papers 7
Sanjay Navani
Breach Candy Hospital and Research Centre
Co-authored papers 7
Torbj??rn Gr??slund
KTH Royal Institute of Technology
Co-authored papers 7
Jenny Ottosson
Bio Pharmaceuticals R&D
Co-authored papers 6
Joakim Lundeberg
KTH Royal Institute of Technology
Co-authored papers 6
Release 1.2