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Author Details

Nikolaus Fortelny
University of Salzburg
2014
30
17
Nathan Sheffield (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36646694Comparative analysis of genome-scale, base-resolution DNA methylation profiles across 580 animal species.Nat Commun2023
37580596In vivo screening characterizes chromatin factor functions during normal and malignant hematopoiesis.Nat Genet2023
37499656Cell-autonomous regulation of complement C3 by factor H limits macrophage efferocytosis and exacerbates atherosclerosis.Immunity2023
37816807Reliable interpretability of biology-inspired deep neural networks.NPJ Syst Biol Appl2023
37365178Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis.Nat Commun2023
34244315Multi-omics profiling predicts allograft function after lung transplantation.Eur Respir J2022
36512641Stress signaling boosts interferon-induced gene transcription in macrophages.Sci Signal2022
34604909The molecular and phenotypic makeup of fetal human skin T lymphocytes.Development2022
33561194αβγδ T cells play a vital role in fetal human skin development and immunity.J Exp Med2021
33717163Spontaneously Resolved Atopic Dermatitis Shows Melanocyte and Immune Cell Activation Distinct From Healthy Control Skin.Front Immunol2021
33483337Persistence of mature dendritic cells, T<sub>H</sub>2A, and Tc2 cells characterize clinically resolved atopic dermatitis under IL-4Rα blockade.Sci Immunol2021
32344053Single-cell transcriptomics combined with interstitial fluid proteomics defines cell type-specific immune regulation in atopic dermatitis.J Allergy Clin Immunol2020
31996669Chromatin mapping and single-cell immune profiling define the temporal dynamics of ibrutinib response in CLL.Nat Commun2020
33110138Distributed changes of the functional connectome in patients with glioblastoma.Sci Rep2020
32746932Knowledge-primed neural networks enable biologically interpretable deep learning on single-cell sequencing data.Genome Biol2020
32972203Single-Cell RNA Sequencing Analysis Reveals a Crucial Role for CTHRC1 (Collagen Triple Helix Repeat Containing 1) Cardiac Fibroblasts After Myocardial Infarction.Circulation2020
32612232Structural cells are key regulators of organ-specific immune responses.Nature2020
32375897Single-cell RNA-seq with spike-in cells enables accurate quantification of cell-specific drug effects in pancreatic islets.Genome Biol2020
31345789Epigenomics and Single-Cell Sequencing Define a Developmental Hierarchy in Langerhans Cell Histiocytosis.Cancer Discov2019
29925830C-terminal truncation of IFN-γ inhibits proinflammatory macrophage responses and is deficient in autoimmune disease.Nat Commun2018
30150718The DNA methylation landscape of glioblastoma disease progression shows extensive heterogeneity in time and space.Nat Med2018
28748932Can we predict protein from mRNA levels?Nature2017
28385878Protease-Inhibitor Interaction Predictions: Lessons on the Complexity of Protein-Protein Interactions.Mol Cell Proteomics2017
28082348Interactome disassembly during apoptosis occurs independent of caspase cleavage.Mol Syst Biol2017
27125827Uncovering a Dual Regulatory Role for Caspases During Endoplasmic Reticulum Stress-induced Cell Death.Mol Cell Proteomics2016
27477282TAILS N-Terminomics and Proteomics Show Protein Degradation Dominates over Proteolytic Processing by Cathepsins in Pancreatic Tumors.Cell Rep2016
25332401Proteome TopFIND 3.0 with TopFINDer and PathFINDer: database and analysis tools for the association of protein termini to pre- and post-translational events.Nucleic Acids Res2015
26010509The path of no return--Truncated protein N-termini and current ignorance of their genesis.Proteomics2015
24865846Network analyses reveal pervasive functional regulation between proteases in the human protease web.PLoS Biol2014
25331112TAILS N-terminomics of human platelets reveals pervasive metalloproteinase-dependent proteolytic processing in storage.Blood2014
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Collaborators

Christoph Bock
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 16
Christopher M Overall
University of British Columbia
Co-authored papers 10
Paul Pavlidis
University of British Columbia
Co-authored papers 6
Matthias Farlik
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 6
Amelie Nemc
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 4
Christian Schmidl
Leibniz Institute for Immunotherapy
Co-authored papers 3
Johanna Klughammer
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 2
Georg Langs
Medical University of Vienna
Co-authored papers 2
Christine Marosi
Medical University of Vienna
Co-authored papers 2
Karl-Heinz Nenning
Medical University of Vienna
Co-authored papers 2
Paul Datlinger
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 2
Don??t Alp??r
Semmelweis University
Co-authored papers 2
Adelheid Woehrer
Medical University of Vienna
Co-authored papers 2
Georg Widhalm
Medical University of Vienna
Co-authored papers 2
Barbara Kiesel
Medical University of Vienna
Co-authored papers 2
Martin Senekowitsch
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 2
Bekir Erg??ner
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 2
Andr?? F Rendeiro
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 2
Johannes A Hainfellner
Medical University of Vienna
Co-authored papers 2
Julia Furtner
Medical University of Vienna
Co-authored papers 2
Thomas Roetzer
Medical University of Vienna
Co-authored papers 2
Waltraud Kleindienst
Paracelsus Medical University Salzburg
Co-authored papers 1
Bernhard Baumann
Medical University of Vienna, Center for Medical Physics and Biomedical Engineering
Co-authored papers 1
Polina Golland
Massachusetts Institute of Technology
Co-authored papers 1
Michael Schuster
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 1
Ulrich Auf dem Keller
Technical University of Denmark
Co-authored papers 1
Astrid E Grams
Medical University of Innsbruck
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Gunhild Jug
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