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Author Details

Steven J Bark
University of Houston
1998
33
17
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
33650800Functional and structural characterization of Hyp730, a highly conserved and dormancy-specific hypothetical membrane protein.Microbiologyopen2021
31132884Discovery of vascular Rho kinase (ROCK) inhibitory peptides.Exp Biol Med (Maywood)2019
31710461Engineered ChymotrypsiN for Mass Spectrometry-Based Detection of Protein Glycosylation.ACS Chem Biol2019
31548273A Universal Stress Protein That Controls Bacterial Stress Survival in Micrococcus luteus.J Bacteriol2019
30865770A color-based competition assay for studying bacterial stress responses in Micrococcus luteus.FEMS Microbiol Lett2019
29680123Twenty-Five Years of Investigating the Universal Stress Protein: Function, Structure, and Applications.Adv Appl Microbiol2018
28124051Solid support resins and affinity purification mass spectrometry.Mol Biosyst2017
28484042A Proteomic Signature of Dormancy in the Actinobacterium Micrococcus luteus.J Bacteriol2017
27693234Observations on different resin strategies for affinity purification mass spectrometry of a tagged protein.Anal Biochem2016
27591123Insights into the anti-angiogenic properties of phosphaplatins.J Inorg Biochem2016
27583984Extent of the Oxidative Side Reactions to Peptides and Proteins During the CuAAC Reaction.Bioconjug Chem2016
25798583Enhancing MALDI time-of-flight mass spectrometer performance through spectrum averaging.PLoS One2015
26612041Formaldehyde scavengers function as novel antigen retrieval agents.Sci Rep2015
21925292Cysteine Cathepsins in the secretory vesicle produce active peptides: Cathepsin L generates peptide neurotransmitters and cathepsin B produces beta-amyloid of Alzheimer's disease.Biochim Biophys Acta2012
22916103The protein architecture of human secretory vesicles reveals differential regulation of signaling molecule secretion by protein kinases.PLoS One2012
21821666NeuroPedia: neuropeptide database and spectral library.Bioinformatics2011
20094657Expansion of the mycobacterial "PUPylome".Mol Biosyst2010
20734175Neuropeptidomic components generated by proteomic functions in secretory vesicles for cell-cell communication.AAPS J2010
20695487Proteomics of dense core secretory vesicles reveal distinct protein categories for secretion of neuroeffectors for cell-cell communication.J Proteome Res2010
20704348Mass spectrometry-based neuropeptidomics of secretory vesicles from human adrenal medullary pheochromocytoma reveals novel peptide products of prohormone processing.J Proteome Res2010
19289094Linear and accurate quantitation of proenkephalin-derived peptides by isotopic labeling with internal standards and mass spectrometry.Anal Biochem2009
19615967Detecting low-abundance vasoactive peptides in plasma: progress toward absolute quantitation using nano liquid chromatography-mass spectrometry.Anal Biochem2009
18184105Proteases for processing proneuropeptides into peptide neurotransmitters and hormones.Annu Rev Pharmacol Toxicol2008
17241125Secretory vesicle aminopeptidase B related to neuropeptide processing: molecular identification and subcellular localization to enkephalin- and NPY-containing chromaffin granules.J Neurochem2007
17850064Differential recovery of peptides from sample tubes and the reproducibility of quantitative proteomic data.J Proteome Res2007
17216050The future of proteomic analysis in biological systems and molecular medicine.Mol Biosyst2007
16512667Proteomic analysis of human immunodeficiency virus using liquid chromatography/tandem mass spectrometry effectively distinguishes specific incorporated host proteins.J Proteome Res2006
15300833The identification of an adenovirus receptor by using affinity capture and mass spectrometry.Chembiochem2004
11553471A new scaffold for amide ligation.Bioorg Med Chem2001
11456785High-temperature protein mass mapping using a thermophilic protease.J Am Chem Soc2001
10720464Fluorescent indicators of peptide cleavage in the trafficking compartments of living cells: peptides site-specifically labeled with two dyes.Methods2000
10571063Engineering an unnatural Nalpha-anchored disulfide into BPTI by total chemical synthesis: structural and functional consequences.FEBS Lett1999
9792690All four homochiral enantiomers of a nuclear localization sequence derived from c-Myc serve as functional import signals.J Biol Chem1998
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Collaborators

Vivian Hook
Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California
Co-authored papers 13
Jill L Wegrzyn
University of Connecticut
Co-authored papers 5
Daniel T O'Connor
Institute for Genomic Medicine, University of California San Diego
Co-authored papers 4
Andrew C S Saphire
The Scripps Research Institute
Co-authored papers 2
Gary Siuzdak
Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 2
Nuno Bandeira
University of California
Co-authored papers 2
Laurent Taupenot
VA San Diego Healthcare System, University of California at San Diego
Co-authored papers 2
Pavel A Pevzner
University of California
Co-authored papers 2
Pieter C Dorrestein
Co-authored papers 1
Vineet Bafna
University of California San Diego
Co-authored papers 1
Michael Smoot
University of California
Co-authored papers 1
John R Yates
TheScripps Research Institute
Co-authored papers 1
Larry Gerace
The Scripps Research Institute
Co-authored papers 1
Michael G Ziegler
University of California San Diego School of Medicine
Co-authored papers 1
Trey Ideker (CM4AI)
University of California San Diego
Co-authored papers 1
Qi Ma
University of California
Co-authored papers 1
Release 1.2