Author details

Full Name

Karin Verspoor

Affiliation

National Centre for Infections in Cancer, 5Peter MacCallum Cancer Centre

ORCID

Career Start Year

2005

Papers

125

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36374542	Performance of ICD-10-AM codes for quality improvement monitoring of hospital-acquired pneumonia in a haematology-oncology casemix in Victoria, Australia.	Health Inf Manag	2024
36374542	Performance of ICD-10-AM codes for quality improvement monitoring of hospital-acquired pneumonia in a haematology-oncology casemix in Victoria, Australia.	Health Inf Manag	2024
36682389	Detecting evidence of invasive fungal infections in cytology and histopathology reports enriched with concept-level annotations.	J Biomed Inform	2023
37549722	Attention-based multimodal fusion with contrast for robust clinical prediction in the face of missing modalities.	J Biomed Inform	2023
36870249	An evaluation of existing text de-identification tools for use with patient progress notes from Australian general practice.	Int J Med Inform	2023
37120028	Analysis of predictive performance and reliability of classifiers for quality assessment of medical evidence revealed important variation by medical area.	J Clin Epidemiol	2023
37302124	We need to chat about artificial intelligence.	Med J Aust	2023
36682389	Detecting evidence of invasive fungal infections in cytology and histopathology reports enriched with concept-level annotations.	J Biomed Inform	2023
37541406	Graph embedding-based link prediction for literature-based discovery in Alzheimer's Disease.	J Biomed Inform	2023
36722350	Automating Quality Assessment of Medical Evidence in Systematic Reviews: Model Development and Validation Study.	J Med Internet Res	2023
36721225	Classifying literature mentions of biological pathogens as experimentally studied using natural language processing.	J Biomed Semantics	2023
37549722	Attention-based multimodal fusion with contrast for robust clinical prediction in the face of missing modalities.	J Biomed Inform	2023
37541406	Graph embedding-based link prediction for literature-based discovery in Alzheimer's Disease.	J Biomed Inform	2023
37120028	Analysis of predictive performance and reliability of classifiers for quality assessment of medical evidence revealed important variation by medical area.	J Clin Epidemiol	2023
37302124	We need to chat about artificial intelligence.	Med J Aust	2023
36722350	Automating Quality Assessment of Medical Evidence in Systematic Reviews: Model Development and Validation Study.	J Med Internet Res	2023
36721225	Classifying literature mentions of biological pathogens as experimentally studied using natural language processing.	J Biomed Semantics	2023
36870249	An evaluation of existing text de-identification tools for use with patient progress notes from Australian general practice.	Int J Med Inform	2023
35335943	COVID-19 Drug Repurposing: A Network-Based Framework for Exploring Biomedical Literature and Clinical Trials for Possible Treatments.	Pharmaceutics	2022
35848784	Tasks as needs: reframing the paradigm of clinical natural language processing research for real-world decision support.	J Am Med Inform Assoc	2022
35758780	Exploring automatic inconsistency detection for literature-based gene ontology annotation.	Bioinformatics	2022
35878821	"Note Bloat" impacts deep learning-based NLP models for clinical prediction tasks.	J Biomed Inform	2022
36266246	Propagation, detection and correction of errors using the sequence database network.	Brief Bioinform	2022
36124954	MPVNN: Mutated Pathway Visible Neural Network architecture for interpretable prediction of cancer-specific survival risk.	Bioinformatics	2022
35354069	Early prediction of incident liver disease using conventional risk factors and gut-microbiome-augmented gradient boosting.	Cell Metab	2022
36563029	Predicting Publication of Clinical Trials Using Structured and Unstructured Data: Model Development and Validation Study.	J Med Internet Res	2022
33755285	Use of a Victorian statewide surveillance programme to evaluate the burden of healthcare-associated Staphylococcus aureus bacteraemia and Clostridioides difficile infection in patients with cancer.	Intern Med J	2022
35335943	COVID-19 Drug Repurposing: A Network-Based Framework for Exploring Biomedical Literature and Clinical Trials for Possible Treatments.	Pharmaceutics	2022
34983371	Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT.	BMC Bioinformatics	2022
34897466	Detection of self-harm and suicidal ideation in emergency department triage notes.	J Am Med Inform Assoc	2022
35159930	Accuracy of Machine Learning Assisted Detection of Keratoconus: A Systematic Review and Meta-Analysis.	J Clin Med	2022
35156027	Evaluating the dose, indication and agreement with guidelines of antimicrobial use in companion animal practice with natural language processing.	JAC Antimicrob Resist	2022
35758780	Exploring automatic inconsistency detection for literature-based gene ontology annotation.	Bioinformatics	2022
35354069	Early prediction of incident liver disease using conventional risk factors and gut-microbiome-augmented gradient boosting.	Cell Metab	2022
35848784	Tasks as needs: reframing the paradigm of clinical natural language processing research for real-world decision support.	J Am Med Inform Assoc	2022
36563029	Predicting Publication of Clinical Trials Using Structured and Unstructured Data: Model Development and Validation Study.	J Med Internet Res	2022
36266246	Propagation, detection and correction of errors using the sequence database network.	Brief Bioinform	2022
36124954	MPVNN: Mutated Pathway Visible Neural Network architecture for interpretable prediction of cancer-specific survival risk.	Bioinformatics	2022
35878821	"Note Bloat" impacts deep learning-based NLP models for clinical prediction tasks.	J Biomed Inform	2022
33755285	Use of a Victorian statewide surveillance programme to evaluate the burden of healthcare-associated Staphylococcus aureus bacteraemia and Clostridioides difficile infection in patients with cancer.	Intern Med J	2022
35159930	Accuracy of Machine Learning Assisted Detection of Keratoconus: A Systematic Review and Meta-Analysis.	J Clin Med	2022
34983371	Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT.	BMC Bioinformatics	2022
35156027	Evaluating the dose, indication and agreement with guidelines of antimicrobial use in companion animal practice with natural language processing.	JAC Antimicrob Resist	2022
34897466	Detection of self-harm and suicidal ideation in emergency department triage notes.	J Am Med Inform Assoc	2022
32697830	PoLoBag: Polynomial Lasso Bagging for signed gene regulatory network inference from expression data.	Bioinformatics	2021
34211109	Early prediction of diagnostic-related groups and estimation of hospital cost by processing clinical notes.	NPJ Digit Med	2021
34102083	Bow-tie architecture of gene regulatory networks in species of varying complexity.	J R Soc Interface	2021
33870071	ChEMU 2020: Natural Language Processing Methods Are Effective for Information Extraction From Chemical Patents.	Front Res Metr Anal	2021
34337589	Use and validation of text mining and cluster algorithms to derive insights from Corona Virus Disease-2019 (COVID-19) medical literature.	Comput Methods Programs Biomed Update	2021
32697830	PoLoBag: Polynomial Lasso Bagging for signed gene regulatory network inference from expression data.	Bioinformatics	2021

1 - 50 of 250

Sam Henry

George Mason University

Career Start Year 2017

Number of shared co-authors 2

Jake Lever

University of Glasgow

Career Start Year 2016

Number of shared co-authors 0

Sijia Liu

Mayo Clinic, University at Buffalo - North Campus

Career Start Year 2016

Number of shared co-authors 5

Lucy Lu Wang

University of Washington, USA Allen Institute for AI

Career Start Year 2015

Number of shared co-authors 3

Yaoyun Zhang

The University of Texas School of Biomedical Informatics

Career Start Year 2015

Number of shared co-authors 1

Majid Rastegar-Mojarad

Mayo Clinic

Career Start Year 2013

Number of shared co-authors 4

Feichen Shen

Shanghai Polytechnic University

Career Start Year 2012

Number of shared co-authors 3

Dingcheng Li

University of Minnesota

Career Start Year 2012

Number of shared co-authors 5

Hee-Jin Lee

The University of Texas School of Biomedical Informatics

Career Start Year 2010

Number of shared co-authors 0

Cosmin A Bejan

Duke University

Career Start Year 2010

Number of shared co-authors 0

Siddhartha R Jonnalagadda

Department of Preventative Medicine Northwestern University Chicago IL.

Career Start Year 2010

Number of shared co-authors 4

Prashanti Manda

University of North Carolina at Greensboro

Career Start Year 2009

Number of shared co-authors 6

Bridget T McInnes

Virginia Commonwealth University

Career Start Year 2007

Number of shared co-authors 1

Yuan Luo

Northwestern University Feinberg School of Medicine

Career Start Year 2007

Number of shared co-authors 3

Matthias Samwald

Institute of Artificial Intelligence, Medical University of Vienna

Career Start Year 2007

Number of shared co-authors 3

Qiaozhu Mei

University of Michigan ann arbor

Career Start Year 2006

Number of shared co-authors 0

Dina Demner-Fushman

Lister Hill National Center for Biomedical Communications

Career Start Year 2004

Number of shared co-authors 4

Chengxiang Zhai

University of Illinois Urbana-Champaign

Career Start Year 2004

Number of shared co-authors 0

Trevor Cohen

University of Washington (A.M.U., University of Washington (J.S.

Career Start Year 2004

Number of shared co-authors 3

Guergana Savova

Boston Children's Hospital, Harvard Medical School.

Career Start Year 2003

Number of shared co-authors 5

Dietrich Rebholz-Schuhmann

University of Cologne

Career Start Year 2003

Number of shared co-authors 18

Hua Xu

Yale University

Career Start Year 2003

Number of shared co-authors 6

Serguei Pakhomov

University of Minnesota

Career Start Year 2002

Number of shared co-authors 3

Indra Neil Sarkar

Center for Biomedical Informatics, Brown University

Career Start Year 2001

Number of shared co-authors 3

Javed Mostafa

University of North Carolina at Chapel Hill

Career Start Year 2001

Number of shared co-authors 1

Wendy W Chapman

University of Melbourne

Career Start Year 1998

Number of shared co-authors 3

Aaron M Cohen

Oregon Health & Science University

Career Start Year 1990

Number of shared co-authors 13

Carol Friedman

Columbia University

Career Start Year 1990

Number of shared co-authors 5

Peter Szolovits

Massachusetts Institute of Technology

Career Start Year 1986

Number of shared co-authors 0

Christopher G Chute

Brown University, Brown University Warren Alpert Medical School, Dartmouth-Hitchcock Medical Center, Harvard School of Public Health, Johns Hopkins Medicine, Mayo Clinic Minnesota

Career Start Year 1985

Number of shared co-authors 13

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